Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu05g00911 ATGGAACAACAACAACAACATTCATCATCAGCAAACAGCAACAACAACAACAATGGTACTAGTAGTCATATGAACAGTGGTAGCAGGCAAAGCAGCACAAGGTGGACACCAACAACGGATCAGATAAGGATATTGAAGGATTTATACTACAACAATGGAGTAAGGTCTCCAAGTGCAGAACAGATTCAGAGGATCTCTGCTAGGCTTAGACAGTATGGTAAGATTGAAGGCAAGAATGTCTTCTACTGGTTCCAGAATCACAAGGCCCGTGAGAGGCAGAAGAAGAGGTTCACTTCTGATTCTACTACTACTACCAATGTCAATAATCTTCCACTTCCAACCATGCATAGAGGATCCACCATTAACAACAACAACAATGCTCCTAATTGGATTGCTTCTTCTTCTTCTTCTTCTGCTGGGATGGTTGGTGTGGGCCAGATGGGGAATTATGGCTGTGGATCTGTTCCCATGGAGAAGAGTTTTAGGGAGTGTACAATATCTGCAGGTGGAGGAAGCAGTGTTGGTGGTGCCATAAACCACAACCTGGGATGGGTTGGTGTGGATCCTTATTCATCAACTTACACTGCTTTCTTTGACAAAATAAGGCCTGAGATTGAAACCCTTGAACAAGAACAAGGTGATGATAATAATGATGATGAAGAAATTGATGATGTCACTGAGATTGAAACCCTGCCTTTGTTCCCTATGCATGGTGAAGACATCCATGACTATTGCAGCCTCAGATCCAATAATTCTTCTTCTTCTTCTTTTAACTATGATCATCATCATCATGGATTCAACAACGGTGGTTCTCGTGCTTCCTTGGAGCTTAGTCTCAATTCCTACGGTCGCAAGTCTCCAGATTATGCTTGA 873 0.425 MEQQQQHSSSANSNNNNNGTSSHMNSGSRQSSTRWTPTTDQIRILKDLYYNNGVRSPSAEQIQRISARLRQYGKIEGKNVFYWFQNHKARERQKKRFTSDSTTTTNVNNLPLPTMHRGSTINNNNNAPNWIASSSSSSAGMVGVGQMGNYGCGSVPMEKSFRECTISAGGGSSVGGAINHNLGWVGVDPYSSTYTAFFDKIRPEIETLEQEQGDDNNDDEEIDDVTEIETLPLFPMHGEDIHDYCSLRSNNSSSSSFNYDHHHHGFNNGGSRASLELSLNSYGRKSPDYA 290
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu05g00911 290 CDD homeodomain 33 95 IPR001356 GO:0003677
Adu05g00911 290 Gene3D - 24 93 - -
Adu05g00911 290 SUPERFAMILY Homeodomain-like 11 95 IPR009057 -
Adu05g00911 290 MobiDBLite consensus disorder prediction 1 37 - -
Adu05g00911 290 Pfam Homeodomain 32 93 IPR001356 GO:0003677
Adu05g00911 290 ProSiteProfiles 'Homeobox' domain profile. 28 94 IPR001356 GO:0003677
Adu05g00911 290 PANTHER WUSCHEL-RELATED HOMEOBOX 1-RELATED 1 284 IPR044555 GO:0003700|GO:0099402
Adu05g00911 290 MobiDBLite consensus disorder prediction 93 115 - -
Adu05g00911 290 SMART HOX_1 30 98 IPR001356 GO:0003677
Adu05g00911 290 PANTHER PROTEIN WUSCHEL 1 284 - -
Adu05g00911 290 MobiDBLite consensus disorder prediction 99 115 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu05g00911 Adu-Chr5 11646094 11647691 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu05g00911 28 280 Wox Gene Family AT2G17950 40.273 5.16e-47 157
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-WOX Adu05g00911 Homeodomain 1.2e-17 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu05g00911 - - adu:107488063 457.603