Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu05g00908 ATGTCAAACAGAAAATCCAATAAGGTTGCACAAGCGGTTGTTCTGAAGCAGATTCTGAAGAGGTGTTCAAGTTTTGGAATGAAGCATAATAATAATGAAGAGGGTCTCCCTGATGATGTACCAAAAGGTCATTTTGCAGTGTATGTTGGTGAGAACAGAAGCAGGTACATTGTTCCAATATCATGGCTTGCTCATCCACGGTTTCAAATTCTTCTCCAAAGAGCTGAAGAGGAGTTTGGTTTCAATCATGACATGGGACTCACCATTCCCTGTGATGAAGTTGCTTTTGAGTCCTTAACCTCAATTATCAGATATTAA 318 0.3962 MSNRKSNKVAQAVVLKQILKRCSSFGMKHNNNEEGLPDDVPKGHFAVYVGENRSRYIVPISWLAHPRFQILLQRAEEEFGFNHDMGLTIPCDEVAFESLTSIIRY 105
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu05g00908 105 Pfam Auxin responsive protein 16 102 IPR003676 GO:0009733
Adu05g00908 105 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 7 104 IPR003676 GO:0009733
Adu05g00908 105 PANTHER AUXIN-INDUCED PROTEIN 15A-LIKE 7 104 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu05g00908 Adu-Chr5 11574905 11575531 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu05g00908 5 103 Calmodulin-binding Proteins AT4G34750 44.444 2.57e-22 83.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu05g00908 K14488 - gmx:100798840 188.348
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu03g00558 03 5317878 5318893 Adu05g00908 05 11574905 11575531 ECH
Adu05g00908 05 11574905 11575531 Adu05g00908 05 11574905 11575531 ECH