Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu05g00904 ATGAAGCGGGCAAGGAAATCGAAATCGAACAGGGTTTCGTGGGCTCCTGCGTCTAATTTGTGTCAGATCAAATTGTTTCTGTCTGACGACTGTCCTTCAAAAGTTGGACTGAAATCTCAAGATCATCTTCAAGCAAAGACATCTTCAATGTTGCCTTCAAGTACTAATGAACATATGGACTTACCTCCTGGATTTGAAGACAATCACTTCTTAAACCAGCCAAAGGTTGAACTCTCTCGCATCTCTCCGATTAAATGGGAGCGCCCTCCTCTGTTTGCTTTCAGACATGATTGGCGTGTTGCTGCTGGTGAAGAAAGTAAGGAGAAAATGGATCAAAAGCTAAGAGAAATGAAAGTGCTTGAAGCAGTTTATCCTCGCATTTCTGCCATACCTCCCAGCCCTTCTGTTTCTCATGATGTAGACAAGGAAGGTTATGATGATAACCACACTCCTCTCATCCCTATCATTCCCATTGAGGAGGAGGATTCGATGGATATTAATCCTGAAGTGTCAGACGCAAAACTCGCAGATACCCCCACTAAGTTGCTGTCACAAAACTTGCAGCAATATATAGCAGCTGCAACACCTATTAATTCACAATGCAACACCTCTGCTGCTGTTCCCTTATCTGCAGGTGGAAACTCCATGCTGGCAATTTCTCCTGGTTCGGAACCAGATTTAGCTGCAGCCTCAGCTCTGGTAGCAGCAGCCATTTTGAAGAGTAATGAGCAAGGAAACCCAATTGATATGGATCTACTTGTTAAAATATTTAATGACCCAATAATGATAGAGAAATTGGTTAACCAACGGGGAACTGCAACCGCCACCATAACTACCTCTTCAACTACTGGGTTGAAATCTGCTGCTTCTGGGACTACACCCACAAGCACAGTTGGTTTAGTTCCTTCTTCTGCTCCAAAGCAAGCAACTTCCTTAGCCTCCATGTTGATACCTACACTTAATAAGCCAGCAATTCCCCCAGTTCCATTATCTAGTCCTTCCTCTGGTAATTTAGCAACTAGCTCAATTACCCTGCCTCCACAACCAACTACACAATCACCTTCACCTCCACCTCCATCCACTTCTACATTTAATAAGCACAGGTCTGTCAACAATAATGTTCACCATGTAACGAATGGAGCACTTCCCTCTTTAGAACCCCAGCCTCCTCCTCAAGATACAACTCTGTTATCTGGTGCAAACCAGGTGCGATCAACGGCTGCCACAGTGGCTTATCAAACAAGTAGCACCGGTTCTTCTTTTGCAGTGAAGGATGCCAACTATTATAAGAACCTTATTAGGCAACATGGTGCAGATAAGCAAGATGGTCAAGAATCACTAATAGGTATCCGTCATAATAATTTCCAAGACTTTAAAATGGTACATAACCTTAAACAAAGGGAAGTGATATTCAAAAACCAGAAACCTTGCATATACTTTAACAGCTCAAGGGGTTGCCGAAATGGTGCAAATTGCCCCTATCAGCATGATATCTCAGCTCAGTGGGGAGCTGGTAATGACCTAGTGGCACAAAATGCAAAAAGAATGAAACTAGGTACAGAAGTTAATGGGAGGATATAA 1581 0.4307 MKRARKSKSNRVSWAPASNLCQIKLFLSDDCPSKVGLKSQDHLQAKTSSMLPSSTNEHMDLPPGFEDNHFLNQPKVELSRISPIKWERPPLFAFRHDWRVAAGEESKEKMDQKLREMKVLEAVYPRISAIPPSPSVSHDVDKEGYDDNHTPLIPIIPIEEEDSMDINPEVSDAKLADTPTKLLSQNLQQYIAAATPINSQCNTSAAVPLSAGGNSMLAISPGSEPDLAAASALVAAAILKSNEQGNPIDMDLLVKIFNDPIMIEKLVNQRGTATATITTSSTTGLKSAASGTTPTSTVGLVPSSAPKQATSLASMLIPTLNKPAIPPVPLSSPSSGNLATSSITLPPQPTTQSPSPPPPSTSTFNKHRSVNNNVHHVTNGALPSLEPQPPPQDTTLLSGANQVRSTAATVAYQTSSTGSSFAVKDANYYKNLIRQHGADKQDGQESLIGIRHNNFQDFKMVHNLKQREVIFKNQKPCIYFNSSRGCRNGANCPYQHDISAQWGAGNDLVAQNAKRMKLGTEVNGRI 526
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu05g00904 526 MobiDBLite consensus disorder prediction 331 348 - -
Adu05g00904 526 MobiDBLite consensus disorder prediction 281 303 - -
Adu05g00904 526 MobiDBLite consensus disorder prediction 327 397 - -
Adu05g00904 526 PANTHER ZINC FINGER CCCH DOMAIN-CONTAINING PROTEIN 6-RELATED 1 518 - -
Adu05g00904 526 PANTHER ZINC FINGER CCCH DOMAIN-CONTAINING PROTEIN 45-RELATED 1 518 - -
Adu05g00904 526 MobiDBLite consensus disorder prediction 362 379 - -
Adu05g00904 526 ProSiteProfiles Zinc finger C3H1-type profile. 471 499 IPR000571 GO:0046872
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu05g00904 Adu-Chr5 11539960 11545143 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C3H Adu05g00904 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu05g00904 - - adu:107488052 974.926
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu05g00904 05 11539960 11545143 Adu05g00904 05 11539960 11545143 ECH