Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu05g00900 ATGGAATCATCGTGTGTCCCACCTGGGTTTCGCTTCCACCCAACGGATGAAGAGCTTGTTGGTTATTATCTGAGGAAGAAAGTGGCATCTCAGAAGATAGACCTTGACGTTATCAGAGAGATCGATCTCTATCGTATTGAACCCTGGGATCTCCAAGAGAGATGTAGGATCGGGTATGAAGAGCAGAACGAGTGGTACTTCTTCAGCCACAAAGACAAGAAGTATCCGACGGGGACTCGAACGAACAGGGCCACCATGGCGGGGTTCTGGAAGGCCACGGGAAGAGACAAGGCGGTGTACGACAAGGCGAAGCTGATCGGGATGAGGAAGACTCTGGTCTTCTACAAAGGGAGAGCCCCTAACGGCCAGAAAACAGACTGGATCATGCACGAGTACAGACTTGAATCCGATGAAAACGGACCCCCTCAGGAGGAAGGGTGGGTTGTTTGTAGAGCATTCAAGAAAAGGACGACAAACGGGCAAACGAAGACTATGGAAGGATGGGATTCAAGCTACTTGTACGAGGAAGCAAGCGGCGGCGGTGGCGGTGGCGGCACGGTTGTTGAGTCAATTGAGCAGCTGCTCTCAAGGCAGGGTCATCATCATCATCATCATCAAAGCAGCTTCATGTGCAAGCAAGAAATAGAGAACATGCATGCAAATATAGCAGCAGAGCAATTTGTACAGCTTCCACAGCTTGAGAGCCCAAGTTTGCCGCTAGTTAAGAGGCCAACAACAACAACAAGCACAATGGCACTAGTCTCAGAAAGCAATGAAGAGCATAACATGTTATCTTGCAATAACACGAAGAAAGTAGTGACTGATTGGAGGGATCTTGATAAGTTTGTGGCATCTCAACTGAGTCATGGAGGAGACAATAGTAGGCACGAAACTGAAACCGATGATGCAGCAGTGCTCCCAAGCTTTATGGATAATAACAACCATGACAACAATGGTAGCATCTCGGACATGTCATTGCTGCAGCTTCTGCAGAGTAGTAGTAGTAGTAATAGTAGGGTCAACAATGAAGGGAACAGGTTGATGATGAGCATGAGCCCCTTTCTAAACACAAGCTCTGACTGTGATATTGGGATATGCGTCTTCGAAAATTAA 1113 0.4762 MESSCVPPGFRFHPTDEELVGYYLRKKVASQKIDLDVIREIDLYRIEPWDLQERCRIGYEEQNEWYFFSHKDKKYPTGTRTNRATMAGFWKATGRDKAVYDKAKLIGMRKTLVFYKGRAPNGQKTDWIMHEYRLESDENGPPQEEGWVVCRAFKKRTTNGQTKTMEGWDSSYLYEEASGGGGGGGTVVESIEQLLSRQGHHHHHHQSSFMCKQEIENMHANIAAEQFVQLPQLESPSLPLVKRPTTTTSTMALVSESNEEHNMLSCNNTKKVVTDWRDLDKFVASQLSHGGDNSRHETETDDAAVLPSFMDNNNHDNNGSISDMSLLQLLQSSSSSNSRVNNEGNRLMMSMSPFLNTSSDCDIGICVFEN 370
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu05g00900 370 PANTHER NAC DOMAIN-CONTAINING PROTEIN 76 4 317 - -
Adu05g00900 370 Pfam No apical meristem (NAM) protein 7 134 IPR003441 GO:0003677|GO:0006355
Adu05g00900 370 SUPERFAMILY NAC domain 3 155 IPR036093 GO:0003677|GO:0006355
Adu05g00900 370 Gene3D NAC domain 15 159 IPR036093 GO:0003677|GO:0006355
Adu05g00900 370 ProSiteProfiles NAC domain profile. 6 155 IPR003441 GO:0003677|GO:0006355
Adu05g00900 370 PANTHER NAC DOMAIN-CONTAINING PROTEIN 82-RELATED 4 317 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu05g00900 Adu-Chr5 11426325 11428266 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu05g00900 1 370 NAC Transcription Factor Family AT2G18060 58.718 4.49e-151 429
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Adu05g00900 NAM 3.2e-38 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu05g00900 - - aprc:113869508 481.485