Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu05g00872 ATGAACCCAAAACCGCCACGAGTCACTGCTTATGACTTGGTGGTTGGTATATATAGCCAGAGAGAGCATCACAAACAAGACATGGCATGGATGATTGTGACGGGAGTAATAATCTGCTTCATCACGAGTCTTTGTTGGTGGCTTCTCCGTGAAAATAACAAGAAGAAGAAGAAGAAGGTGGTGAGAAAGGGGAAGGTTCCAGAAGGGCGGTGGGGTTGGCCTATAATCGGAGAGACCCTTGATTTCATTGCCTCTGGCTACACTTCTCAACCTCAACCTCTCACCTTCTTGGAAAAGCGCAAGTCCATGTATGGGAATGTGTTCAAGACGAGCATATTGGGAAGCAGTGTGATAGTGTCGACGGAGGTGGAGGTGAACAAGGTGGTTCTGATGAACCAAGGGAACATGTTCGTCCCTGCTTATCCCAAATCAATAAGGGAACTCATGGGGGAACACTCCATACTCCACATGAATGGCACCCTCCACAGGAAGATGCATGCACTCATCGGAGGCTTCCTCCGATCCCCGCACCTCAAGGCTCGAATCACCACTGACATTGAACGCGCTGTCAAACAATGCTTGGCCACTTGGACCTCGCACCAATCAATATACGTTCAAGATCAAGTCAAAATGATTACGTTTAGTGTATTGGTTAAAGTTTTGATGAGCGTTGGTGCTGGTGAAGAGCTCAAGTTGTTGAAGAAAGAATTTGAAGAGTTCATCAAAGGGTTAATTTGCTTGCCCCTCAAGTTTCCAGGAACAAGGCTATACAAATCCTTGAAGGCGAAAGAAAGGATGGTGAAGATTGTGAAGAGGATAATAGAGGAGAGGAAAAAGAAGAAGAAGGAAAAAGTTAGTAATGAAGAGGAGAAGGATGTGGTGGACGTGGTGTTAGGGAATGAGTGGAATCCGGAGCTGACGATGGAAATGATGAGCTCCAACATAATAGAGATGATGATACCTGGTGAAGAGACCCTTCCTACTGCCATGACCATCGCTCTCTTCTTCCTTTCTAACTCCCCTCTTGCTCTTTCCAAACTCCGAGAGGAGAACATGCAACTGAAGAGGCAGAAGAGTAGTAGTCCTAACTCTTCAGATGAATATGCATGGACTGATTACATGTCGCTGCAGTTTACTCAAAATGTCATAAGTGAAACTCTTAGAATGGCCAATATTGTCAACGGCATTTGGAGAAAAGCAGTCAAAGACGTAGAAATTAAAGGGTACTTAATTCCTAAGGGATGGTGTGTTATGGCATCACTTACCTCTGTTCACTTAGACTCCAACAACTATGAAAACCCCTTTAAGTTTGATCCATGGAGATGGGAGAAAATTGGAGCTGCGGCTAGTAACAACTGTTTTACCCCATTTGGCGGTGGACAGAGATTATGCCCTGGGTTAGAACTCTCTAGGCTAGAGCTTTCTATTTTCCTTCACCATCTTGTCACTACTTACAGATGGGTAGCTGAGACAGATGAAATAATATACTTTCCAACCGTCAAGATGAAAAGAAAGCTGCCAATTAGTGTAGAACCCATTAATGCATGA 1548 0.4444 MNPKPPRVTAYDLVVGIYSQREHHKQDMAWMIVTGVIICFITSLCWWLLRENNKKKKKKVVRKGKVPEGRWGWPIIGETLDFIASGYTSQPQPLTFLEKRKSMYGNVFKTSILGSSVIVSTEVEVNKVVLMNQGNMFVPAYPKSIRELMGEHSILHMNGTLHRKMHALIGGFLRSPHLKARITTDIERAVKQCLATWTSHQSIYVQDQVKMITFSVLVKVLMSVGAGEELKLLKKEFEEFIKGLICLPLKFPGTRLYKSLKAKERMVKIVKRIIEERKKKKKEKVSNEEEKDVVDVVLGNEWNPELTMEMMSSNIIEMMIPGEETLPTAMTIALFFLSNSPLALSKLREENMQLKRQKSSSPNSSDEYAWTDYMSLQFTQNVISETLRMANIVNGIWRKAVKDVEIKGYLIPKGWCVMASLTSVHLDSNNYENPFKFDPWRWEKIGAAASNNCFTPFGGGQRLCPGLELSRLELSIFLHHLVTTYRWVAETDEIIYFPTVKMKRKLPISVEPINA 515
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu05g00872 515 Gene3D Cytochrome P450 55 513 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Adu05g00872 515 PANTHER CYTOCHROME P450 FAMILY BRASSINOSTEROID OXIDASE 43 510 - -
Adu05g00872 515 SUPERFAMILY Cytochrome P450 62 512 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Adu05g00872 515 PANTHER CYTOCHROME P450 26 43 510 - -
Adu05g00872 515 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 457 466 IPR017972 GO:0005506|GO:0016705
Adu05g00872 515 PRINTS P450 superfamily signature 321 338 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Adu05g00872 515 PRINTS P450 superfamily signature 381 392 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Adu05g00872 515 PRINTS P450 superfamily signature 455 464 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Adu05g00872 515 PRINTS P450 superfamily signature 464 475 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Adu05g00872 515 PRINTS E-class P450 group IV signature 95 118 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Adu05g00872 515 PRINTS E-class P450 group IV signature 376 392 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Adu05g00872 515 PRINTS E-class P450 group IV signature 425 443 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Adu05g00872 515 PRINTS E-class P450 group IV signature 448 464 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Adu05g00872 515 PRINTS E-class P450 group IV signature 464 482 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Adu05g00872 515 Coils Coil 270 291 - -
Adu05g00872 515 Pfam Cytochrome P450 71 490 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu05g00872 Adu-Chr5 10845879 10849456 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu05g00872 65 486 Cytochrome P450 AT3G13730 52.482 6.31e-162 466
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu05g00872 K12637 - gmx:100799030 676.011
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu05g00872 05 10845879 10849456 Adu05g00872 05 10845879 10849456 ECH