LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Adu05g00852	ATGATGACGAATGATGATGCCATGTTGTTTGCATTGAAGCGGTTTCAAACTGATGAATTGGATGGTGCTGGTGATGGGACATGCCACCATTCAGAAAGAATTAGTTTTCCATTTAGCCTTTCCAGATCAGCGATAAACATTCATTTTCACAATTCATGGCAGTGGCAGTGTGTGAAGGAGAGGAAGAAGGAAGCAATGGAAATTCCCATATTAAGGGCTGCAATCATTTCTCACTCTCAACCACTCCTTCATTCTTCTATGTTGATAGGTCAGAGGTTTCATTTTCTATTGGGTCTTGCCTCCTTCCTCATCCAGACAAGAGTTTTCTTCTGCTGCGGCAGATTCCATTCATTCAGTCTTATGCTGGAGATGTCAACCGAGTTATCTACATTTTTGATTGCAGCTTATTCTTCAACGTCTGTTTGCACCATTCTGACTATGATTGCTACCTTGCGTGTTGCACAGCTTTTCTTCTTTCACATCCTCTTTGTTGAAAAGCATATAAATTATGGAAGCAATGGGATGGTGAAGGAGAAGCCAAGGTTCGCTTGGACAGTAAATAGGGAAGCAAAGTCAACATGCCTTGATGGCCTTGACAATTATGACTATGGTGCTTATCAATGGACCATTCAGCTTGTCACCAATGATAGCCGCTTGGAAAATATCCTCTTCCCTATCTTATGGGGCCTCATGACTCTCAGGTTCGATCAATGTTCAATCTCCCCACTATCATTAAAAGGAGTTAAGGATGCTGGATATGAGAAAGATTACTATTGTAAGGATGTCCTTGCCAAGGCTAGAACAGGCACTAGGAAAATAGTTGCCTTTTTGCTTCCATCAATTGAAGTTGTTGCAAATTCACCACCAACTGAACGTGATCATAGGCGGCCACCAATTCATGTGCTTGTCATATGTCCAACTTGA	924	0.4177	MMTNDDAMLFALKRFQTDELDGAGDGTCHHSERISFPFSLSRSAINIHFHNSWQWQCVKERKKEAMEIPILRAAIISHSQPLLHSSMLIGQRFHFLLGLASFLIQTRVFFCCGRFHSFSLMLEMSTELSTFLIAAYSSTSVCTILTMIATLRVAQLFFFHILFVEKHINYGSNGMVKEKPRFAWTVNREAKSTCLDGLDNYDYGAYQWTIQLVTNDSRLENILFPILWGLMTLRFDQCSISPLSLKGVKDAGYEKDYYCKDVLAKARTGTRKIVAFLLPSIEVVANSPPTERDHRRPPIHVLVICPT	307

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Adu05g00852	307	PANTHER	RNA HELICASE	195	307	-	-
	Adu05g00852	307	Gene3D	-	231	307	IPR027417	-
	Adu05g00852	307	SUPERFAMILY	P-loop containing nucleoside triphosphate hydrolases	225	307	IPR027417	-
	Adu05g00852	307	PANTHER	P-LOOP CONTAINING NUCLEOSIDE TRIPHOSPHATE HYDROLASES SUPERFAMILY PROTEIN-RELATED	195	307	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Adu05g00852	Adu-Chr5	10396139	10399465	Transposed

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Adu05g00852	159	233	Ion Channels	AT5G54250	56.000	1.93e-21	92.8

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Adu05g00852	-		K05391	ahf:112800746	352.443