Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu05g00836 ATGTCCGTGAACGCCATTTCTGCGCAGGACTGCATGGAGGAAGAATCCGCGGTGGACGAGTGTTATCGGCCGTTGTCTGCCGAAGAAAAGGGAGGCGATGGTACCGATGCCTTTGGTCCAGGCGGCGACGAATTCGGTGACGAAGTTGATGATGGGGAATTAGGGGTAAAGTCGGATGCAGAGGAGAATTTTGGGGATAGCTTCTTTGACAACTGGGAAGAGAGAGCAGTGGACGGCGTAGCAGAGTTGCGGTGTGTAAATTTCAAGGAAATAACTGCAAAGGAGAGTATGATGTGTCATTTTCTGGATCGATCGGTGGCATTCTTGTTTTATAGTTTGTATGCAAAGATGAATGGTTTCGCTGTGAGGAAGAATAAGATTCGGCGAAATGTGAGGAATGAGATTACTCAACAAGAATTTGTATGTTTCCGGCAAGGGTTTAGAGGAATGGGGTCCGTTAACTACGGCATGCGACACAAGCATGAGCCAAAGGCGGAGACCAGATGCGGTTGTGAGGCAGAGATGCGCGTCCACGTGCACTCCGAAAGTGGTAGATGGATAATATCATACTTTCAGGACTTTCACAACCACGAGATGCTGGACGATAGACTGACTTTCATGCTACCGGGCCATAGGAAAATGGATGCAGCCGCCCTGGAACAAATGAACATGATGCTTAGATCTCGCCATAATTTGAGGGACTTTGTTGAGCAGTTTATGCGTTGCATATCCCAAATGAGGTCCAGGGAAGCACACTCTGATCTGTTATCCGTGGTTGGGGAACCAGTTCTACAGAGTCCATTTCATGATTTGGAGAGGTCAGCAGCAAAGAAGCTGACCAGGGCAATTTTCTTCAACTTCAGGCCCATGTTTTTCCGCGCTTGCACACCGAAGTCTTGTTCTAGATCGTTGGTCCAAGAGTGCTCGCCGTGTCGTAACGAAGCTGAATTTGCGGACATGACGGATAAAGTTCTTCATGAGATAGCGCAGCTGAAAGAGATTGAGGATTCTGGTGATGTAGTTGGTCTGAATGAAGTTGGGGAGGCTTCAACACTAGAGGGCTGTGTGAGGGATCCACAGCTGGTGCGGTGTCAAAAGAGGCAAAGAAAAGAAACGGTGAAGGGGGTGAAGAGGTGCGGTCTTTGTCGCCAGAGAGGGCATAATCAAGTATCATGCCACTTAAATCCCAACAGCAGAATGAATACACAAGAGGGTGCATCATACTTTGGCGGTGAAGGTGAAGGTGAGACTGGCACAATGGAGGACTCGTCTGAGGAGGAGGAGCTGCTGACATGGGACGATGCAGCGGACCTTGCCCTCGACGAGGGCTATGATTCACAGGGCAGAATTTAG 1353 0.4915 MSVNAISAQDCMEEESAVDECYRPLSAEEKGGDGTDAFGPGGDEFGDEVDDGELGVKSDAEENFGDSFFDNWEERAVDGVAELRCVNFKEITAKESMMCHFLDRSVAFLFYSLYAKMNGFAVRKNKIRRNVRNEITQQEFVCFRQGFRGMGSVNYGMRHKHEPKAETRCGCEAEMRVHVHSESGRWIISYFQDFHNHEMLDDRLTFMLPGHRKMDAAALEQMNMMLRSRHNLRDFVEQFMRCISQMRSREAHSDLLSVVGEPVLQSPFHDLERSAAKKLTRAIFFNFRPMFFRACTPKSCSRSLVQECSPCRNEAEFADMTDKVLHEIAQLKEIEDSGDVVGLNEVGEASTLEGCVRDPQLVRCQKRQRKETVKGVKRCGLCRQRGHNQVSCHLNPNSRMNTQEGASYFGGEGEGETGTMEDSSEEEELLTWDDAADLALDEGYDSQGRI 450
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu05g00836 450 MobiDBLite consensus disorder prediction 401 435 - -
Adu05g00836 450 Pfam FAR1 DNA-binding domain 110 200 IPR004330 -
Adu05g00836 450 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN-RELATED 76 240 - -
Adu05g00836 450 MobiDBLite consensus disorder prediction 418 435 - -
Adu05g00836 450 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN 76 240 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu05g00836 Adu-Chr5 10202242 10204719 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Adu05g00836 FAR1 9.9e-20 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu05g00836 - - aip:107633557 362.459