Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu05g00834 ATGACTTCCACCACTGAGTCTATTCAACCGGGTGATCTTTTCTTCTCACGAGAAAGCAGTGCCTTGCAAGGCAAGAAACCTTCGCTGTTGCCCCAAAAACTTCAACAATATGGATATTATAGTCCAAGTCCTGCAGGAACCGCCATGAGTCCCCACATTAGAGGTCTCCCTGCTTCTTCCGTTGAGGATGAAAGCAACGGAAATGGCATGAACATCCGAGGAATCGCCTCATCCGGTGTGTCTCGATCAAGTTCAGCTGTTACAAGCAGAAAAGGCGGTAGCAGTATGACGAGCGATGGTAGTGTGAAGACAACTGATAGCATGAGGAAATTCACAGCCAACAGGAAGAAGAGCCAGAAGGATGCATCATGGTTTGCTTGCATGAGGACAGGAAACTGCAGGACATCGATGAAATCGCCGGAGCGTAAAAGGCCAATTGAGACTTCTTTCATTGGCAGGGCTATTGTGGTGGAAAGCCTCCCACAATTCTGGGCTGATAAGCACCAACCTGCTTCACTTAATGGCTTCATTTGCAATAAACAAGAAGCTCAACTTCTCAAGGAACTAGTGTCTCAGGGCTCTTGCCCTCATATTCTGCTCAAAGGACCCTCCGGTTCTGGGAAAAGAGAACTAGCAATGGCTCTTCTACGCGAAATATATGGTGATGCATGCTGCAATATGTCCCATGAGTTAAGGAGCTTCCCTATTCAGGACAAGAGGCCTATCAAAGTATGTGTTTCAATAGCATCTAGTGCACATCACATGGAGCTCAATGTAAGCATGGAACCAAATGCTAAATATGCTTTGCTGGGATTAATCAAAGAAATTAGCAATATATATGCAATGACACCCGAAGTCAGTAATGTTAATTTCAAGCCTGATTATAAAGTAATACTTCTTTATGGCGTTGATAAAGCAGTGGAGAACATCCAGCACATGATTAAATGGATTATAGACCGGTATTCGGATATATGTAAACTAGTTCTCTGCTGTGAAGATGATGCAGCCATTGTTGAGCCTGTTAAAAACCGTTTTAAAATTATCAAAGTTGATGCACCTCAAACTCACCAAATTGCTGAAGTTCTTATTCATATAGCAAAGAGAGAGGAAATTGATGTATCCCTTAATTTTGCCGCAAAGATTGCCATAAAATCAAAGCAAACCCTGAGGAAAGCTATCATGGCACTCGAAGCTTGCAAGGCGCACAACTATCCATTTTCAGAAGAACAACCTATTCCAATTGGATGGGAGGACATGGATATATATATATATATCGTTGATTTCGAAGTTAACATTAATATATATATCATTTTCACTTTTATCAGCTTACTCTCAATAAGAGGAAAATTTCAAATGCTTCTCTTGGATTTTGTCCACCCCAAACTGATCCTGCAGAAATTGGTGGAAGAGCTGCTGAAAAGAATTGAGGTCGGCTTAAAAAGAGAAGTCTACTATTGGCATGCTTATTATGAAAGAAGACTGCCACCCGGAACAACAGCTTTACTAAAGTTAGAAGAATTTGTGGCCAAGTTCATGAGCATATACAGAAAAAGCTGCGGTACTCAACAATATGTGTAG 1578 0.4157 MTSTTESIQPGDLFFSRESSALQGKKPSLLPQKLQQYGYYSPSPAGTAMSPHIRGLPASSVEDESNGNGMNIRGIASSGVSRSSSAVTSRKGGSSMTSDGSVKTTDSMRKFTANRKKSQKDASWFACMRTGNCRTSMKSPERKRPIETSFIGRAIVVESLPQFWADKHQPASLNGFICNKQEAQLLKELVSQGSCPHILLKGPSGSGKRELAMALLREIYGDACCNMSHELRSFPIQDKRPIKVCVSIASSAHHMELNVSMEPNAKYALLGLIKEISNIYAMTPEVSNVNFKPDYKVILLYGVDKAVENIQHMIKWIIDRYSDICKLVLCCEDDAAIVEPVKNRFKIIKVDAPQTHQIAEVLIHIAKREEIDVSLNFAAKIAIKSKQTLRKAIMALEACKAHNYPFSEEQPIPIGWEDMDIYIYIVDFEVNINIYIIFTFISLLSIRGKFQMLLLDFVHPKLILQKLVEELLKRIEVGLKREVYYWHAYYERRLPPGTTALLKLEEFVAKFMSIYRKSCGTQQYV 525
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu05g00834 525 SUPERFAMILY post-AAA+ oligomerization domain-like 439 515 IPR008921 GO:0003677|GO:0006260
Adu05g00834 525 PANTHER REPLICATION FACTOR C / DNA POLYMERASE III GAMMA-TAU SUBUNIT 99 524 - -
Adu05g00834 525 Gene3D - 431 515 - -
Adu05g00834 525 MobiDBLite consensus disorder prediction 41 115 - -
Adu05g00834 525 Gene3D - 355 412 - -
Adu05g00834 525 MobiDBLite consensus disorder prediction 61 108 - -
Adu05g00834 525 Gene3D - 162 353 IPR027417 -
Adu05g00834 525 CDD AAA 179 219 - -
Adu05g00834 525 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 162 406 IPR027417 -
Adu05g00834 525 PANTHER OS02G0704966 PROTEIN 99 524 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu05g00834 Adu-Chr5 10180652 10183287 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu05g00834 163 516 Core DNA Replication Machinery Family AT5G27740 38.095 3.73e-77 245
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu05g00834 K10756 - gmx:100795321 721.079