Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu05g00778 ATGTCTCAAACCTTTGATTACCTGGCTGATTTAAATGCAAGAAAACTGCAATGGAATTTCAAAGTATATGTAATACGTGTGTGGGAACTCCCTAACAGATACAATGAAGGAGAAGTTGGCACCATTGAAGTGATTATTGAAGATAGTCAGGGCACAAGGTTGCAAGTCTCGATCCCTAAATCCCTGGTGAGCAAGTGGCGGGGTGTCTTGGTTCAGTTTCAAATGTACATTATGACCAACTTCATTGTTGTTGACAACCAAAAGGGTAACATATCAAGGGGAAAGTATTTATTATTCTTCAGTCATAGGACAATCGTCAGTCATGTTGAGAATCCCAGTTTTCCGCTAAATGCTTTTCGATTTAGAACCATCCGTGAGTTACTAAATGCTGAGAAGATCGATGACTCTGCATTGTTTGACATGATTGGTGAAGTAGTTGGTAAAGAAGATCCAAAAGAGTTGATCACCAGCAAAGGAAAGGAGACTAAACGACTGACTGTTATCTTGGAGGACTTAGAAAACAATAGGATTGGGTGCACTATATTTGGTGAAATGGTTGACCAGCTACTTCGTCACATGCAAGATGGAAGGGTTGAGCCACTAATAGTTGTGGTCCAGTATTTTAAGGCAACCAGATGGAATGGCAAGACATCTGTCCAAAGCCATTTTGACATTTCACAGCTGCACATAGACTCCAACCTTAAAGATGTTGCTGAATTTAGGAGCAGGCTGCTTGGCGGTGAACCATCATCCTCTGTGAGGATTAGTCAAGTTCCATCAAAAACAGCTTGGTCAGGGGTTGAGGAGCTTAAACAAGGTGCTGTGTCAGTGAAAACAATTGAAGAAGTCCTTATCCAACATGAGGAAGGTCCAGCTTGGATTGCTGCAAGTATTGTTGCGATTAATGTTACGAAGGATGATTGGTTCTATAAATCATGTAGAAAATGTCCAAAGAAAGTAGAAACTCCTATTGGAAACAGATATGAATGTGGGAAGTGTGACCATACACATGGATCTGCAGCCCTAAGGTTCAAAGTCGAGGTGATGGTTTTTGATGGAACTGGTAGCATCCGATTGCTACTATGGGACAAGGAAACAAGTATGCTATGTGGGAAGAGAGCTGAACAGATTATGGAGGACGATGTTATAGTGGGAGATGAATATCCCAAGACACTTGATAACATGATGGAAAAAAGAGTCCTTTTCAAGATAAATATCAAAGAAGCCAACATTAATCAATTTGATCATGTGTACACGGTTATGAAAATCTGTGATGATGAGGATATCATTGACAAAAATCTTCCCAAAGAGTTGTCTACTAATCTTCCGAGTAATGTCAGTGAAGATGGCTGCAACAACTATTTGGAAATTTCAGAAAATGTGGCTAATCTTAAAACTGACTGTGATACTGAGTCTTCTATGGATGTTGTGGAGGAGTGCATCTCATCCCTCAAGTACAAAACACCATCCAAAAATATTACCAATGGATTGAAGAATTCTCCTCTAAGTCTGAATGAAGATGAGGAAGAAGGCCAGCTATCAACCAACAGGTTCAGTAGGAAGATGGGAAAGAGACAGAAATGTGTTAACCTTGATGCAGATATATGA 1608 0.4005 MSQTFDYLADLNARKLQWNFKVYVIRVWELPNRYNEGEVGTIEVIIEDSQGTRLQVSIPKSLVSKWRGVLVQFQMYIMTNFIVVDNQKGNISRGKYLLFFSHRTIVSHVENPSFPLNAFRFRTIRELLNAEKIDDSALFDMIGEVVGKEDPKELITSKGKETKRLTVILEDLENNRIGCTIFGEMVDQLLRHMQDGRVEPLIVVVQYFKATRWNGKTSVQSHFDISQLHIDSNLKDVAEFRSRLLGGEPSSSVRISQVPSKTAWSGVEELKQGAVSVKTIEEVLIQHEEGPAWIAASIVAINVTKDDWFYKSCRKCPKKVETPIGNRYECGKCDHTHGSAALRFKVEVMVFDGTGSIRLLLWDKETSMLCGKRAEQIMEDDVIVGDEYPKTLDNMMEKRVLFKINIKEANINQFDHVYTVMKICDDEDIIDKNLPKELSTNLPSNVSEDGCNNYLEISENVANLKTDCDTESSMDVVEECISSLKYKTPSKNITNGLKNSPLSLNEDEEEGQLSTNRFSRKMGKRQKCVNLDADI 535
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu05g00778 535 MobiDBLite consensus disorder prediction 495 509 - -
Adu05g00778 535 Pfam Domain of unknown function DUF223 43 112 IPR003871 -
Adu05g00778 535 PANTHER BNAC07G49340D PROTEIN 109 483 - -
Adu05g00778 535 SUPERFAMILY Nucleic acid-binding proteins 5 113 IPR012340 -
Adu05g00778 535 CDD RPA1_DBD_B_like 140 244 - -
Adu05g00778 535 Gene3D - 4 108 IPR012340 -
Adu05g00778 535 Gene3D - 113 250 IPR012340 -
Adu05g00778 535 PANTHER REPLICATION FACTOR A 1, RFA1 109 483 IPR004591 GO:0003677|GO:0005634|GO:0006260|GO:0006281|GO:0006310
Adu05g00778 535 CDD RPA1_DBD_C 277 423 IPR013955 -
Adu05g00778 535 Pfam Replication factor-A C terminal domain 300 423 IPR013955 -
Adu05g00778 535 MobiDBLite consensus disorder prediction 495 515 - -
Adu05g00778 535 Gene3D - 262 433 IPR012340 -
Adu05g00778 535 SUPERFAMILY Nucleic acid-binding proteins 120 244 IPR012340 -
Adu05g00778 535 SUPERFAMILY Nucleic acid-binding proteins 277 425 IPR012340 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu05g00778 Adu-Chr5 9384998 9387478 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu05g00778 8 362 Core DNA Replication Machinery Family AT2G06510 24.064 3.47e-18 85.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu05g00778 - - ahf:112803472 848.966