Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu05g00777 ATGAATGGTGTAATGCACAGGAACCAAGGAGACCCCATCATCAGAGCTGCTTCAGGGGAAGCTAGTGTTTCTTCCTCTGGCAATCAGACAGTACCTTCAAAATCAGCCACCAAGAAAAAGCAGGTGATTGCTCTGTCTCCGAAGACCCTATTGGCGACGAACAGATTCGTGTGCGAAATCTGCAACAAGGGTTTCCAGAGGGATCAGAACCTTCAGCTCCATCGAAGGGGTCACAACCTTCCATGGAAGCTGAGGCAGAGGTCGAGCAAGGAGGTGAAGAAGAGGGTGTACGTGTGCCCCGAGCCAACGTGCGTTCACCACGATCCTTCACGCGCGCTCGGGGATCTCACCGGAATCAAGAAGCACTTCTGCAGAAAGCACGGGGAGAAGAAGTGGAAATGCGACAAGTGCTCTAAGAAATACGCTGTTCAATCAGATTGGAAGGCTCACTCTAAGATTTGCGGCACTAGAGAGTACAAATGCGATTGTGGCACTTTGTTCTCAAGGAGGGATAGCTTCATCACGCATAGGGCTTTTTGTGATGCGTTGGCGGAGGAAAGTGCGAGATCTCAGACTCATTCACAAACTACTCAGTCTCAGATTGGTGTTAAGGTTAGTTCTGAATCAGATTCTAAGGCTGTTAACGCTGAATCTTCGTCGCCTCAGCCGACACCTCCACCTCCTGCTACTACTCCTGCTCCTGCTCCACCACCGCCGCCTCCTCCGGTTCAGCCGGAAGCTCCGCCACTGCCGGCCACTACTACTACTACCACCACCACCCAGCCAAACAGTGTTGTTGTGCCACTGGTTTTGCAGACTCAGAATCCAGAGTTGCCAGAAAATTCCCCACAAATCATAGAAGAGCCACAAGCTAACACTGCTCTGAATGGGAGCTGTAGCAGCAGCACTAGCTCAACAAGCAATGGTGGTACTAGCAGCAGTGTATTTGCAAGTTTGTTCGCTTCATCAACTGCATCGGGTAACCTGCAATCCCAAACACCACCTGCATTTACCGACCTCGTTAGGGCCATGGGGCCCCCTGATCATCCAACAGATCTCCCAGGGCCATCCTCCTCGGAGCCCATTTCTTTGTGCCTTGCCACTAATCATGGCTCGTCAATTTTTGGAACAGGAGGGCAGGAGCGCCGCCAATATGCACCACCGCCACAGCCAACCATGTCTGCCACTGCTTTGCTGCAAAAAGCAGCTCAAATGGGTGCGGCTGCAACCAATGCCTCGCTGCTTCGTGGTTTAGGTATAGTGTCCTCTTCTGCTTCGTCTTCACCAGCTCAGCAAGATGGCTTGCAATGGGGTCAGCAGCCGGCTGAACCAGAGAGTGCCTCGGTTCCGGCGGGGCTTGGACTTGGGCTGTCTTTTGACAGTGGCTCTGGACTAAAGGAATTAATGATGGGGACTCCTTCCATGTTTGGTCCAAAGCATACCACCCTCGATTTTCTAGGATTGGGGATGGCTGCTGGGGGAACTCCTGGTGGAGGCTTGTCGGCACTCATCACATCTATTGGTGGTGGTTTGGATGTTAGTGCTGCAGCAGCAGCATCTTTTGGAAACGGAGAGTTTTCTGGCAAAGACATTGGGCGGAGCACATGA 1608 0.523 MNGVMHRNQGDPIIRAASGEASVSSSGNQTVPSKSATKKKQVIALSPKTLLATNRFVCEICNKGFQRDQNLQLHRRGHNLPWKLRQRSSKEVKKRVYVCPEPTCVHHDPSRALGDLTGIKKHFCRKHGEKKWKCDKCSKKYAVQSDWKAHSKICGTREYKCDCGTLFSRRDSFITHRAFCDALAEESARSQTHSQTTQSQIGVKVSSESDSKAVNAESSSPQPTPPPPATTPAPAPPPPPPPVQPEAPPLPATTTTTTTTQPNSVVVPLVLQTQNPELPENSPQIIEEPQANTALNGSCSSSTSSTSNGGTSSSVFASLFASSTASGNLQSQTPPAFTDLVRAMGPPDHPTDLPGPSSSEPISLCLATNHGSSIFGTGGQERRQYAPPPQPTMSATALLQKAAQMGAAATNASLLRGLGIVSSSASSSPAQQDGLQWGQQPAEPESASVPAGLGLGLSFDSGSGLKELMMGTPSMFGPKHTTLDFLGLGMAAGGTPGGGLSALITSIGGGLDVSAAAAASFGNGEFSGKDIGRST 535
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu05g00777 535 MobiDBLite consensus disorder prediction 19 37 - -
Adu05g00777 535 MobiDBLite consensus disorder prediction 187 219 - -
Adu05g00777 535 MobiDBLite consensus disorder prediction 186 264 - -
Adu05g00777 535 MobiDBLite consensus disorder prediction 250 264 - -
Adu05g00777 535 Gene3D Classic Zinc Finger 110 192 - -
Adu05g00777 535 MobiDBLite consensus disorder prediction 1 37 - -
Adu05g00777 535 SMART c2h2final6 132 152 IPR013087 -
Adu05g00777 535 SMART c2h2final6 97 127 IPR013087 -
Adu05g00777 535 SMART c2h2final6 56 78 IPR013087 -
Adu05g00777 535 MobiDBLite consensus disorder prediction 220 249 - -
Adu05g00777 535 MobiDBLite consensus disorder prediction 423 443 - -
Adu05g00777 535 Gene3D Classic Zinc Finger 32 102 - -
Adu05g00777 535 SUPERFAMILY beta-beta-alpha zinc fingers 55 152 IPR036236 -
Adu05g00777 535 ProSitePatterns Zinc finger C2H2 type domain signature. 58 78 IPR013087 -
Adu05g00777 535 PANTHER PROTEIN INDETERMINATE-DOMAIN 2-LIKE 17 534 - -
Adu05g00777 535 PANTHER SERINE/THREONINE-PROTEIN KINASE RIO 17 534 - -
Adu05g00777 535 MobiDBLite consensus disorder prediction 326 358 - -
Adu05g00777 535 MobiDBLite consensus disorder prediction 423 451 - -
Adu05g00777 535 ProSiteProfiles Zinc finger C2H2 type domain profile. 56 78 IPR013087 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu05g00777 Adu-Chr5 9376562 9380723 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu05g00777 17 535 IDZ Gene Family AT5G66730 55.128 1.14e-166 480
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Adu05g00777 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu05g00777 K25869 - gmx:100806404 726.472
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu05g00777 05 9376562 9380723 Adu05g00777 05 9376562 9380723 ECH