Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Adu05g00750 | ATGGCTACTATCCTTTTGGCCATTGTGATTGCCACCCTTTTCACTGCAAACCCTATTTCTTGCGCCAAGCAATCCAAAATAACTGGCATGAAAATGAACGTCATTGATCAATGTTGGAGATTGAATCCCCAATGGAGGAGCCATCGATCGCAACTCGCCAGCTGCTCCATTGGCTATGCGGGCAAGATGATGAACAACATTGGCAATGACCTCGTCTATTATGAAGTTACTGACTCTAGTGATGACCCCATTAACCCTAAGCCTGGTACCTTGCGGTATGGAGCTTCTATGATTCAACAAAAAGTTTGGATTACATTTAAAAGCGACATGAAAATCACATTGGCCAAACCCCTTCTCATTAGTAGCTTTACCGCCATTGATGGTCGTGGCACCAATGTCCACGTTGCTAATAATGCATGCTTCATGATCTTTAAGGCAACGAATGTAATAATCCACGGCATTCGAATCCATCATTGTAAATCACAAGCTCCTGGTTTGGTGGTGGGTCCAAATGGGAAGGTAATTTCATTGGGTCAAGTTGATGGCGATGCAATCAGACTAGTCACTGCCTCAAAGATTTGGATTGATCATAATACACTTCATGATTGCGAAGATGGTCTTCTTGATGTTACACGAGGTTCCACTGATGTCACTATCTCTAACAACTGGTTCCGAAACCAAGATAAGGTTATGCTTCTTGGCCATGACGATGGATATATTAGAGACCGGAACATGAAAGTTACCGTTGTCTACAATCATTTCGGACCGAATTGCAACCAACGCATGCCAAGGATCCGTCATGGATATGCACATGTAGCAAACAATCTTTATCAGGGATGGATGCAATATGCTATTGGTGGAAGCAAAGAACCCAGCCTCAAAAGCCAATCTAACCTCTTCATAGCACCTAAATCCGGGAACAAGGAGGTGACATGGAGAAAAGGCAGTAACGAAAATGGGGATAGATGGGAATTCCATTCAGTAGGGGATGTTTTTGAAAATGGAGCGTCTTTCACGGCAACTGAAGGAGGACGTGTGCCAAAACCCAATTATAGTGAGGAACAACGTTTTAAAGTTCTTGATGCTAAGTCTGTTAGATTTTTGACAAAATCCTCTGGCGTACTACGATGCACCAACAAAAAATCTATTTGCTAA | 1155 | 0.4277 | MATILLAIVIATLFTANPISCAKQSKITGMKMNVIDQCWRLNPQWRSHRSQLASCSIGYAGKMMNNIGNDLVYYEVTDSSDDPINPKPGTLRYGASMIQQKVWITFKSDMKITLAKPLLISSFTAIDGRGTNVHVANNACFMIFKATNVIIHGIRIHHCKSQAPGLVVGPNGKVISLGQVDGDAIRLVTASKIWIDHNTLHDCEDGLLDVTRGSTDVTISNNWFRNQDKVMLLGHDDGYIRDRNMKVTVVYNHFGPNCNQRMPRIRHGYAHVANNLYQGWMQYAIGGSKEPSLKSQSNLFIAPKSGNKEVTWRKGSNENGDRWEFHSVGDVFENGASFTATEGGRVPKPNYSEEQRFKVLDAKSVRFLTKSSGVLRCTNKKSIC | 384 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Adu05g00750 | 384 | Gene3D | - | 32 | 376 | IPR012334 | - | |
Adu05g00750 | 384 | PANTHER | PECTATE LYASE | 10 | 380 | - | - | |
Adu05g00750 | 384 | PANTHER | PECTATE LYASE 18-RELATED | 10 | 380 | IPR045032 | GO:0030570 | |
Adu05g00750 | 384 | PRINTS | Pollen allergen Amb family signature | 181 | 202 | IPR018082 | - | |
Adu05g00750 | 384 | PRINTS | Pollen allergen Amb family signature | 283 | 302 | IPR018082 | - | |
Adu05g00750 | 384 | PRINTS | Pollen allergen Amb family signature | 323 | 347 | IPR018082 | - | |
Adu05g00750 | 384 | PRINTS | Pollen allergen Amb family signature | 261 | 280 | IPR018082 | - | |
Adu05g00750 | 384 | PRINTS | Pollen allergen Amb family signature | 117 | 133 | IPR018082 | - | |
Adu05g00750 | 384 | PRINTS | Pollen allergen Amb family signature | 55 | 72 | IPR018082 | - | |
Adu05g00750 | 384 | PRINTS | Pollen allergen Amb family signature | 354 | 377 | IPR018082 | - | |
Adu05g00750 | 384 | SUPERFAMILY | Pectin lyase-like | 22 | 366 | IPR011050 | - | |
Adu05g00750 | 384 | Pfam | Pectate lyase | 120 | 300 | IPR002022 | - | |
Adu05g00750 | 384 | SMART | amb_all | 109 | 306 | IPR002022 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Adu05g00750 | Adu-Chr5 | 8963821 | 8965225 | Transposed |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Adu05g00750 | 63 | 315 | Polysaccharide Lyase | AT5G09280 | 70.751 | 3.82e-143 | 407 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Adu05g00750 | K01728 | - | gmx:100780437 | 630.943 |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Adu05g00750 | 05 | 8963821 | 8965225 | Adu05g00750 | 05 | 8963821 | 8965225 | ECH |