Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu05g00703 ATGTTTGAGATGAATTTTAGGAGGTGTGAAGAAGATTGTTCTGTGCCAGAGAACCCAATCAAGAGAAGGGAGAACAAGAACAGAAGTGGAGGAGGAGGAGGAGTTGCATTGTTGAATGGGAACTCAAAGGAGGTTTCGAAAGTTCCTGGCTTTAGTTTGATGACTACTACTCCAGCACCTGAACTGAAAAGTAGCAGTTCCAAGAGTAATTCTTCTTCTCTGTTCATGAATCGTGTTGAGATTCAAGCCCAACAATCTCAGAATCCTAGGAAACAAAGGCGATGCTGGTCACCGGAGCTACACCGGCGTTTCATCAATGCTCTCCAACAACTTGGAGGAGCACAAGTGGCCACTCCTAAGCAGATAAGGGAACTGATGCAGGTGGAAAGCCTAACAAACGATGAAGTCAAAAGTCACTTACAAAAGTACAGACTTCATGTAAGAAAATTCCCAGTTTCATCTTCAGCTGAGCATGATGCTAATAATAATAATATTGATGATGATGATGAGGATGATCTATGGGAAATGAAGAAGAAAGATCAATGTGGAAAAGGGAACAAAAATTCATCATCACAATCACAATCTGGTTCACCACAGGGTCCTCTACTCTTAGCAGGTTCAGTTAAGGGACTCTCAAGCATGGATGCAGATGATGAGCACTCAGATTGCCGCAATTGGAAAGCTGCTATTCACCACCAACCGCCAGAATCTGATAATCACAGCCGCTAA 729 0.4294 MFEMNFRRCEEDCSVPENPIKRRENKNRSGGGGGVALLNGNSKEVSKVPGFSLMTTTPAPELKSSSSKSNSSSLFMNRVEIQAQQSQNPRKQRRCWSPELHRRFINALQQLGGAQVATPKQIRELMQVESLTNDEVKSHLQKYRLHVRKFPVSSSAEHDANNNNIDDDDEDDLWEMKKKDQCGKGNKNSSSQSQSGSPQGPLLLAGSVKGLSSMDADDEHSDCRNWKAAIHHQPPESDNHSR 242
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu05g00703 242 Pfam Myb-like DNA-binding domain 93 144 IPR001005 -
Adu05g00703 242 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 88 148 IPR017930 -
Adu05g00703 242 MobiDBLite consensus disorder prediction 185 201 - -
Adu05g00703 242 PANTHER MYB-LIKE DNA-BINDING DOMAIN, SHAQKYF CLASS PROTEIN 4 231 - -
Adu05g00703 242 MobiDBLite consensus disorder prediction 18 41 - -
Adu05g00703 242 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 91 146 IPR006447 GO:0003677
Adu05g00703 242 MobiDBLite consensus disorder prediction 213 242 - -
Adu05g00703 242 PANTHER MYB FAMILY TRANSCRIPTION FACTOR 4 231 IPR044787 GO:0003700|GO:0006355
Adu05g00703 242 Gene3D - 90 147 - -
Adu05g00703 242 SUPERFAMILY Homeodomain-like 89 149 IPR009057 -
Adu05g00703 242 MobiDBLite consensus disorder prediction 179 242 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu05g00703 Adu-Chr5 8320063 8321317 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu05g00703 78 162 G2-like Transcription Factor Family AT1G68670 68.235 2.11e-33 122
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Adu05g00703 Myb_DNA-binding 1.2e-06 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu05g00703 - - gmx:100785723 206.068