Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu05g00665 ATGTCAGACGAAGAAGCTGCTGCAACTACCGCCGCCGGTAGGAGAAGGACCAGAGGTACCGCTTCCTCCGCCCGCAGCGAGGCCCTAGAGCGTCTCAAAGCCCGTGTCCGCGGCGGGCCCCAGATCAGGCTCGAAAACCCTATCTACGATACTGTCGAGGAAGAAGAGTACAACGCCCTTGTCGCCAAGCGCCGCGAGCAGGCCCGTGCCTTCATCGTTGACGACGATGGCCTCGGCTACGGCGATGAGGGGGAGGAAGAGGACTGGTCTAAGGGAGGCTTCTCTCTCTCCTCTGACGAATCCGATGGCGCCGAAAATGAAGCCAAGCCAAAGCGGAAGAAGCTTGAAAAGAAAGAACATAATCCCAACCAGAAACGCACATCGGCTGCGCTTTCCGCCGCCGCTGTCGGCGCCCAGCGGCTATCCTCGATGTTCACCTCATCGCTGTTCAAGAAGAGCAGGGACGACAAGGCCCCCGACAGCATCGTTGACGATGTTCTGGCGGAGTTTGCAGCCGACGAGACCGATAGGGAACGGCGGAGAAGAATCCATCCGAAAGCCATTCCCAATTCGAATTCAAATTCGTCCTCTGCTACAAACGATGCTCTTCGGATTAATCGCGATTTCGTTAGCAATTCGTCAATTGTTGGAGCATCTGATTTGATGAGAGGTTCTTCGTTGCTCAACACTGCTGTAAATTGTGATGTTGAGTCGGTTAGGGTTGTTAGCAATGACGTCAGTGATTTGGGTTCAGAGCAGAAGAAAGGCGAGGCAGTTAAAGAAAATGAGCTTTCAATTGAATGCTCGGATAATGGGAAAGTTTTTAGTTCTGAGAATGGTGATGCATCAATTGAGCAAGTTCCGAGTAATGTTAATGTTGGTAAGGAGGAAGTTGTGAAGGACTCTAAGGCAGAGGAAAAACCTGTTGCTGTGAAAAAGGAGTTGTTTACTTTGAATGCAAAGCTTAAGGAAGAAAAAGAGGACCCTGCGTTGAGTGCTACTGCGGGTTGGCAAGCAGTGAGAAATGGTGGTGCAGCGAATGCAAATGTTGGGGATTCGAAAGCATTGAGAGAGGCTTTGCATAAAGAAGAACACTCGGAGTTCAATCTGGAGGAAGATGGTTCGCTACCTTTCTACATACTCGATGCCTATGAGGAGTTTAATGGAGCGAATAGGGGAACACTTTATTTATTTGGGAAGGTTAAAGCCGGGAATTCGTATCAGAGTTGTTGTGTTGTTGTGAAGAACATGCAAAGATGTGTCTATGCCATTCCAAGTCACCCGATACATCTTACTGATGAAATGGTGAAACTTGAGAAAGATGCTAAAAAATCTGCAGATTTCCATAAAAAGCTGCAAGATGCAGTATCTGGTTTAAAGAACGAGTTAGCAAAACATCTTCTGAACTTGAATGTTTCATGCTTTAGTATGGCTCCTGTTAAGAGGAAGTATGCATTTGAAAGGTTCGAAATTCCTTCTGGTGAAAGTTATGTGCTTAAAATCAGTTATCCATTCAAGGATCAAATACTTCCTGCGGACCTGAAAGGAGAAAGTTTCTCTGGTCTTTTAGGAACTCATTACAGTGCTCTGGAGCTTTTTCTGGTTAAAAGAAAGATTAAGGGACCTTCGTGGCTACAGGTTTCGAACTTTTCAAACTGCCCAACTTCTGAGAGGGAAAGATTTGTTAGCTGGTGCAAATTTGAAGTGATTGTTGACTCCCCTAAAGACATCAGGGTTTCAACTTCATCAAAAATCAGTTTTGAGATTCCTCCTGTGGTTGTCACAGCAATAAATTTGAAAACCACCATAAATGAAAAACAGAACGTAAATGAGATTGTATCTGCATCTATAGTCTGCTGCAATATGGTTAAGATTGACACACCTATGTTGGCTTCAGAATGGAAGAGACCTGGAATGCTTACCCATTTTACTGTCATTCGTAAAATTGATGGGAATATATTTCCACTGGGGTTCAGCAAGGAGGTTACAGAGAGAAACTCAAAAGCTGGGTCAAATGTTCTGTGTGTTGAAAGCAGTGAAAGAGCTTTGCTGAATCGCCTGATGACAGAATTACACAAGTTGGATAGCGATGTTCTTGTTGGGCATAATATATCTGGATTTGACCTGGAGGTACTCCTCCATAGATCCCAGGCGTGCAAAGTACCAAGCAACATGTGGTCTAAACTAGGCCGCCTCAAGCGTTCTGCATTGCCTAGGCTTGATAGAGGAAGCAAGGCATTTGGTTCTGGAGCTCGTCCTGCTGTCATGTCTTGTATGTCTGGCCGGCTTCTTTGTGATACATTCTTGTGTTCCCGTGATCTGCTCAAAGAGGTCAGTTATTCATTAACTGAACTCACAAAAACGCAGCTGAAGAAGTTTAGGAAGGAAGTTGCTCCACATGATGTTCCAAAGAAGTTCCAATCAGCTGAATCCCTAATTGAGCTTATTGAATGTAGTGAAACGGATGCATGGTTGTCCATGGAACTCATGTTTCATTTGAGTGTTCTTCCTCTCACCCGCCAGCTGACTAATATTAGTGGTAATCTGTGGGGGAAAACTCTTCAGGGTGCTCGGGCACAGAGAGTGGAGTTTCTTTTGTTGCATGCTTTCCATGCAAAGAAATATATGGTGCCAGACAAAATTCCAAACTATGCAAAAGAAACAACATTGACGAAACGCAAAGTAGCTCATGGTGTTGAGGATAGCAACTTACAAGAAGCAGATGGTAATGAGGCAAACTATGATAATGATGCTGCCGATACTGATAATAAGAAAAGCAAAAAGGCTCCTTCTTATGCTGGAGGTCTGGTATTAGAGCCAAAGAAGGGACTATATGACAAATATATACTACTTCTGGACTTCAATAGTCTTTATCCTTCTATCATTCAGGAATATAATATATGCTTTACCACTGTTGAAAGATCTCAAGGTGCATCATTTTCCCGTTTACCATCCAGTCTAGAAACTGGGGTCTTGCCGGAGTGGATGAAGAAAGCATCTGGTCTTAAAGTGCAGCAACTGGACATTCAGCAGCAAGCATTGAAGCTTACTGCAAACAGTATGTATGGATGCCTAGGATTTTCCAATTCAAGATTTTATGCAAAGCCAATTGCTGAACTTATAACCCTACAAGGAAGGGAGATACTGCAGAGTACTGTTGATCTTGTTCAGAATAACTTGAACTTAGAGGTCATATATGGTGATACTGATTCAATAATGATATACAGTGGTCTAGATGATATTGCAAAAGCAAAAGCAATGGCTTCAAAAGTTATTCAAGAGGTCAATAAGAAATATAGGTGCTTGGAAATTGATCTTGATGGTTTGTACAAGAGGATGCTACTACTTAAGAAAAAGAAATATGCAGCTGTTAAAGTGCAGTTCAACGATGATACCCCGTATGAGGTTATTGAACGTAAAGGTCTTGATATTGTCCGCCGGGATTGGAGCTTATTAGCTAAAGAATTGGGTGATTTTTGCTTGACTCAAATTTTGTCAGGAGGATCATGTGAAGATGTTGTTGAATCAATTCACAATTATCTCATGCAGGAGCAAGAAAAAATGAGGAGTGGACAAGTACCATTGGAGAAATATGTCATCAATAAAACATTGACTAAACCTCCGGAGGCTTATCCTGATGCCAAAAACCAGCCACATGTTCTTGTGGCACAAAGAATGAAGCAACAAGGTTACTCCTCTGGTTGTTCTGTTGGTGATACAATCCCTTACATAATTTGCTATGAAGAGCAGGGCTGTAGTTCAGGTAGTGCAACAGGTATTGCTCAGCGTGCAAGGCATCCCGATGAACTAAAACAAGAGCAAGGGAAATGGCTTATTGACATTGAGTACTATTTGTCACAACAGATTCATCCAGTGGTATCACGTCTTTGTGCATCAATCCAGGGCACAAGCCCAGAAAGACTGGCCGACTGTTTAGGGCTTGACTCATCAAAGTTTCAACATAAATCAAGTGAAGCTCCAAGTAGTGATCCTACAAGCTCACTTTTATTTGCTGCTGATGACGAAGAAAGGTACAGGGGATGTGAGCCACTGGTATTGTGTTGCCCCAGCTGCTCTGATTCTTTTGACTGCCCACCTGTTTTTAAGTCAATTTGTTTGTTGGGAAGTGAAAAGATAAGCAGCTCAGGCACGGAGGAATCCAGTTACAAATTCTGGCATAAACTGCGATGTTCCAAATGCCCGGAAGATGGTGTTGGAAGAATATCTCCTGCAATGCTAACCAATCAGGTCAAAATGCAAACAGAGAAGTTTGTTTTAATGTACTACAGAGGTGTACTGATGTGTGATGATGAAACGTGTAAGCATACGACACGCAGTATCAACCTTAAGTTGGTGGGTGATTCTGAGAGAGGAACTGTTTGTCCAAATTATCCTCGATGCAACGGCCGTCTCCACAGAAAGTACACCGAGGCAGACTTGTACAAGCAGCTCTCATATTTCTGCCATGTGTTGGATACTTTTTGCAGTATGGAGAAGATGGAGGCTAAATCTAGGATGCTAATTGAGAAGGAGTTGATGAAGATTAGACCAATGGTTGATCTAGCAGCATCCACGGTACAGAAGTTAAGAGACCGTTGTGCCTACGGTTGGGTGAATTTGCAGGACTTTGTTGTTCCTGTTTAA 4644 0.4345 MSDEEAAATTAAGRRRTRGTASSARSEALERLKARVRGGPQIRLENPIYDTVEEEEYNALVAKRREQARAFIVDDDGLGYGDEGEEEDWSKGGFSLSSDESDGAENEAKPKRKKLEKKEHNPNQKRTSAALSAAAVGAQRLSSMFTSSLFKKSRDDKAPDSIVDDVLAEFAADETDRERRRRIHPKAIPNSNSNSSSATNDALRINRDFVSNSSIVGASDLMRGSSLLNTAVNCDVESVRVVSNDVSDLGSEQKKGEAVKENELSIECSDNGKVFSSENGDASIEQVPSNVNVGKEEVVKDSKAEEKPVAVKKELFTLNAKLKEEKEDPALSATAGWQAVRNGGAANANVGDSKALREALHKEEHSEFNLEEDGSLPFYILDAYEEFNGANRGTLYLFGKVKAGNSYQSCCVVVKNMQRCVYAIPSHPIHLTDEMVKLEKDAKKSADFHKKLQDAVSGLKNELAKHLLNLNVSCFSMAPVKRKYAFERFEIPSGESYVLKISYPFKDQILPADLKGESFSGLLGTHYSALELFLVKRKIKGPSWLQVSNFSNCPTSERERFVSWCKFEVIVDSPKDIRVSTSSKISFEIPPVVVTAINLKTTINEKQNVNEIVSASIVCCNMVKIDTPMLASEWKRPGMLTHFTVIRKIDGNIFPLGFSKEVTERNSKAGSNVLCVESSERALLNRLMTELHKLDSDVLVGHNISGFDLEVLLHRSQACKVPSNMWSKLGRLKRSALPRLDRGSKAFGSGARPAVMSCMSGRLLCDTFLCSRDLLKEVSYSLTELTKTQLKKFRKEVAPHDVPKKFQSAESLIELIECSETDAWLSMELMFHLSVLPLTRQLTNISGNLWGKTLQGARAQRVEFLLLHAFHAKKYMVPDKIPNYAKETTLTKRKVAHGVEDSNLQEADGNEANYDNDAADTDNKKSKKAPSYAGGLVLEPKKGLYDKYILLLDFNSLYPSIIQEYNICFTTVERSQGASFSRLPSSLETGVLPEWMKKASGLKVQQLDIQQQALKLTANSMYGCLGFSNSRFYAKPIAELITLQGREILQSTVDLVQNNLNLEVIYGDTDSIMIYSGLDDIAKAKAMASKVIQEVNKKYRCLEIDLDGLYKRMLLLKKKKYAAVKVQFNDDTPYEVIERKGLDIVRRDWSLLAKELGDFCLTQILSGGSCEDVVESIHNYLMQEQEKMRSGQVPLEKYVINKTLTKPPEAYPDAKNQPHVLVAQRMKQQGYSSGCSVGDTIPYIICYEEQGCSSGSATGIAQRARHPDELKQEQGKWLIDIEYYLSQQIHPVVSRLCASIQGTSPERLADCLGLDSSKFQHKSSEAPSSDPTSSLLFAADDEERYRGCEPLVLCCPSCSDSFDCPPVFKSICLLGSEKISSSGTEESSYKFWHKLRCSKCPEDGVGRISPAMLTNQVKMQTEKFVLMYYRGVLMCDDETCKHTTRSINLKLVGDSERGTVCPNYPRCNGRLHRKYTEADLYKQLSYFCHVLDTFCSMEKMEAKSRMLIEKELMKIRPMVDLAASTVQKLRDRCAYGWVNLQDFVVPV 1547
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu05g00665 1547 Pfam DNA polymerase family B, exonuclease domain 407 784 IPR006133 -
Adu05g00665 1547 Gene3D Palm domain of DNA polymerase 918 1128 IPR023211 -
Adu05g00665 1547 MobiDBLite consensus disorder prediction 897 931 - -
Adu05g00665 1547 MobiDBLite consensus disorder prediction 1 42 - -
Adu05g00665 1547 MobiDBLite consensus disorder prediction 74 133 - -
Adu05g00665 1547 SUPERFAMILY Ribonuclease H-like 372 878 IPR012337 -
Adu05g00665 1547 MobiDBLite consensus disorder prediction 177 199 - -
Adu05g00665 1547 SMART polmehr3 590 1078 IPR006172 GO:0000166|GO:0003676|GO:0003887
Adu05g00665 1547 Coils Coil 449 469 - -
Adu05g00665 1547 Gene3D - 590 905 IPR036397 GO:0003676
Adu05g00665 1547 Gene3D - 418 540 - -
Adu05g00665 1547 Gene3D DNA Polymerase alpha, zinc finger 1338 1532 IPR038256 -
Adu05g00665 1547 PRINTS DNA-directed DNA-polymerase family B signature 1064 1072 IPR006172 GO:0000166|GO:0003676|GO:0003887
Adu05g00665 1547 PRINTS DNA-directed DNA-polymerase family B signature 949 962 IPR006172 GO:0000166|GO:0003676|GO:0003887
Adu05g00665 1547 PRINTS DNA-directed DNA-polymerase family B signature 1011 1023 IPR006172 GO:0000166|GO:0003676|GO:0003887
Adu05g00665 1547 PANTHER DNA POLYMERASE ALPHA CATALYTIC SUBUNIT 17 1545 - -
Adu05g00665 1547 SUPERFAMILY DNA/RNA polymerases 925 1315 IPR043502 -
Adu05g00665 1547 Pfam DNA polymerase alpha subunit p180 N terminal 35 89 IPR024647 -
Adu05g00665 1547 TIGRFAM pol2: DNA polymerase (pol2) 48 1297 - -
Adu05g00665 1547 Pfam DNA polymerase family B 995 1299 IPR006134 GO:0000166|GO:0003677
Adu05g00665 1547 Pfam DNA polymerase family B 849 978 IPR006134 GO:0000166|GO:0003677
Adu05g00665 1547 ProSitePatterns DNA polymerase family B signature. 1066 1074 IPR017964 GO:0000166|GO:0003676
Adu05g00665 1547 Gene3D - 1142 1328 IPR042087 -
Adu05g00665 1547 Pfam DNA Polymerase alpha zinc finger 1339 1543 IPR015088 GO:0003887|GO:0006260
Adu05g00665 1547 Gene3D - 378 576 - -
Adu05g00665 1547 CDD POLBc_alpha 925 1315 IPR045846 GO:0003887|GO:1902975
Adu05g00665 1547 Gene3D Helix hairpin bin 994 1025 - -
Adu05g00665 1547 CDD DNA_polB_alpha_exo 590 841 - -
Adu05g00665 1547 Coils Coil 1092 1112 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu05g00665 Adu-Chr5 7727214 7738774 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu05g00665 9 1545 Core DNA Replication Machinery Family AT5G67100 59.276 0.0 1802
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu05g00665 K02320 - gmx:100798779 2069.66
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu05g00665 05 7727214 7738774 Adu05g00665 05 7727214 7738774 ECH