Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu05g00663 ATGGGAGATCATATGTACAACTATGACAAGAATCTGTCATCGTCCTCTTCTTCACAGGACGAAATCTCTCTTTTCCTGCGTCAGATTTTGCTGCGTTCCTCACAACCTCACCAAGATTCACCACCACCGCCACAACAACAACAACAACAACAACTCCCTTCTTCTTCTTCCTCTTCTTGTTTCCCATCAACCTCACAGCTTCAAGATGGGAAGATCTCTGCACTTGGTTCCACCCCTGCTGGTTTTCTCTCTGCCTCCTCCATGAAGGGGCACGGAGGTAATTCTGCTCCAAATGTCTCTTCTTCTTCCGTAGGACTCAGTGCCAACGATACTGATGACTATGATTGCGAAAGTGAGGAGGGTGTTGAGGCCTTGGCAGAAGATGTTCCAGCAAAGCCTGTACCTTCTAGGAGTTCATCAAAGAGGAGCAGAGCAGCAGAAGTTCATAATTTGTCAGAAAAGAGAAGGAGGAGTAGGATCAATGAAAAGATGAAGGCCTTGCAAAATCTAATTCCGAATTCTAACAAGACTGATAAGGCTTCAATGCTGGATGAGGCTATTGAATATCTTAAACAGCTTCAGCTCCAAGTACAGGGGAAGTTTATGATAATATTTCAGATGTTATCGATGAGAAATGGATTGAGTTTGCACCCTATGAGCTTTCCCGAAGGATTGCAGCCTCTACAGTTCTCAAGAATGAGTATGGAGTTTAGTGAAGAAAACAGGGCCATCCCTGTAAACATGACAGAAAGTCTGCCTTTGCACCAAGGCAACCCCTTGCACTATGCATCCCTACCTAACAAACCAACCATGCCAAATCAGCCATCAGTGACTTACCCTTCATATCTTAACAACTCAGAAGCGCCGTTTGGGCTGGAACCGCCAATCCTAACACATATAAAACACCTTCAACCAGGAAGATTTTCTGAGGCGCATAGGGAAGACACACTGCAGCAGCAGCAATCAAATGCAAGCCATTCAGATACCGATCCATTAGGTGGTTCTCAAGTTGCAAAAGAGTTGGAGACAGGAACCATGGTCACAACATCACTCTCCTTTGACCTGCAAACATGTGAACCTAAGGACAACAACCCTTTGCAAATTTGCATTGCTGGAAGCGATCAATCATCATCAGTGATCATTAGGAATAGTTAA 1155 0.4459 MGDHMYNYDKNLSSSSSSQDEISLFLRQILLRSSQPHQDSPPPPQQQQQQQLPSSSSSSCFPSTSQLQDGKISALGSTPAGFLSASSMKGHGGNSAPNVSSSSVGLSANDTDDYDCESEEGVEALAEDVPAKPVPSRSSSKRSRAAEVHNLSEKRRRSRINEKMKALQNLIPNSNKTDKASMLDEAIEYLKQLQLQVQGKFMIIFQMLSMRNGLSLHPMSFPEGLQPLQFSRMSMEFSEENRAIPVNMTESLPLHQGNPLHYASLPNKPTMPNQPSVTYPSYLNNSEAPFGLEPPILTHIKHLQPGRFSEAHREDTLQQQQSNASHSDTDPLGGSQVAKELETGTMVTTSLSFDLQTCEPKDNNPLQICIAGSDQSSSVIIRNS 384
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu05g00663 384 Gene3D - 139 201 IPR036638 GO:0046983
Adu05g00663 384 PANTHER TRANSCRIPTION FACTOR PIF1-RELATED 13 328 IPR031066 -
Adu05g00663 384 MobiDBLite consensus disorder prediction 315 332 - -
Adu05g00663 384 MobiDBLite consensus disorder prediction 308 335 - -
Adu05g00663 384 Pfam Helix-loop-helix DNA-binding domain 148 194 IPR011598 GO:0046983
Adu05g00663 384 MobiDBLite consensus disorder prediction 28 156 - -
Adu05g00663 384 SMART finulus 150 199 IPR011598 GO:0046983
Adu05g00663 384 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 144 193 IPR011598 GO:0046983
Adu05g00663 384 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 141 206 IPR036638 GO:0046983
Adu05g00663 384 CDD bHLH_AtPIF_like 145 214 - -
Adu05g00663 384 MobiDBLite consensus disorder prediction 142 156 - -
Adu05g00663 384 PANTHER TRANSCRIPTION FACTOR SPATULA 13 328 - -
Adu05g00663 384 MobiDBLite consensus disorder prediction 49 109 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu05g00663 Adu-Chr5 7705227 7708663 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu05g00663 109 333 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G36930 47.009 2.64e-45 158
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Adu05g00663 HLH 4.4e-14 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu05g00663 - - gmx:100793754 407.527
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu05g00663 05 7705227 7708663 Adu05g00663 05 7705227 7708663 ECH