Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu05g00662 ATGAGAATTTTCACTACTCCTTTATCAACTTCTGATACTGGTGGTAATAATAATTCGACATTGTTTTTTGAAAGTTTTTCTTCCTCAGCTATTGTCTCCCAAGAAAACAGAGAGACTTCTATTATGTTCCCAATTAACAATAACAATCCTGCTGCTGAAATAATCCACATCAATGACGAAGAACCAGATCTTGAATCATCATTTATAGAAGGCAATCTTAATTCTTTCTCTTCAATTTTACCAACAATGGAACAAACCAATCAAGATGCCTCAAATCTTTTAACATTACAAAGAAATTTGAGAATCAACACCGCCAACAACAACAACCGACAAGATGGTGTGTCACTTGATTTATCCTTACACCAGTTTGGCGGTGATGGCGGTGGCAGCTCTTCTACTATGGATGTCATCAGTGGCAGCGCTGGTGGTGGTGGAGGTGGAGATGGTCTCTTGACGAGCGTTCTCAACAATACTTCTACTAGGCGCATCATGCCTATCAAAAGAACTGCACCTGATTATGCTCGCCGAGAGTTTACAGTGGGTGAGAGCTCAAGTGCCGGTGGTGCTGGTGGTGGATCTGTTGCTCAACCTATGGCAGCCCCCAAGCGCCGCCCCACCGCTAATGAAAATGCGGCGCTGCGCGTTTCATCATCATCTAATACCTGCACTTGTACCCCTTCTCCCACTTGCGCTCTCCATGCTTCCGCCAATAATAATCTTTCTTCATCTTCCAGGGAACAACCCCATGAAACTGCTAACAACAACAACAACCCCCAAAATGTTGTTCGTGTTCCTTCTAGTTTGTGGCCAATTTCTGAGGTGCAACGAGCTCTTCAGTCTGATAGCTTTCAAGTCCTTCAACCTACTGCTACTACTACTCCTCCTCCTCCTCCTCCTCCTCCTAGTAGTAGTAATAATAACAATAATAACACAACACTTGGTATTATGCAACTTGGTGATGGTTCCTTTATTTACCCCCAACCTGTTTTTGATAGTAGCCACCACCACCACCAAATCCACCATGGCCACCAGCACACGCCAATTAATTCGTTATACCACCAAGGCTATCAACGTTTTTTCTCCACTGCTGGCACTTCTCCATTCCGCCCGGCCTCAATCAATTACATGGAGAATCTTCCTCCTCCTCATCATCATCCGTATGCCGGTTCTTCTTCTTCTTCTTCGTCTCCTTCCCCTCTTCCTTGGAGCACCGTGATTAGGCCAAGGGCTGTTCCTGTGTCTCTCACTCACCGAGTTGGAGGAAGTAATAGAGAATCTAACAACACCAGAAACAACTATCCTTTTTCTTCTCCTGCTGGAAGGGGAACAATCACTGTGACTCAGAATCGTGGAAACTCATCATCATCAAGCTTATTCCCCGGTGGGTCTCCTTCAACACGGCTACTCGAAAGCCTTGTACAAAACGCTGGTACCCCTTCTTCTGGATCTGGCGGTGGTCAGAATAATACAGCAGGTACTACCGTTGGAGCTGTTCCTGCAGTTCAGCAGCTGTCGAACGTTGCTCGTGCATGGATTCGAAGGCTGAACGCTCATGATGAGGCCTTGACGAGAACGTCACAATCTTCTACCCCTGATATTACTCCTCACAGGGCACTGCGAGCTTCTCCTATTGCTGAGATGTATAATTTGCCTACTTATTTTGCTGATGATTCAAGAAGGCTTAGACAAGAGATCCGCACTGCCATTGATCATTTGCGTAATGGAGGTTCCGTCCGACTGGAGGAACTTTTAATTCTTGATTACTCCATTGTGCTGAACTTGCTTGACAACATTGAGGAGGAAGAGGATGATGTTCCGCAGCAGTTTTATGAGTATCTGGGAGACGGGCAGCGAGTGACCAACCCCGATTTAGGACTGACGGAAACTGAGGTTGCAATATGTATTGGACGGGAAATTTTCCAAACTGTTGGTGAGCAGCCTCAGAACATTGATGCATGCGGCATATGTCAGGAGGACTATGTTCACGGTGAAGAGCTTGGGAGATTGGATTGTGCGCACAGATATCACCTTTCTTGCATCAGGCAGTGGTTGCTCATCAAGAACAGATGCCCAATCTGCAAGAAAATGGCTCTCACCATCATAGACTTGGAGGACGACGAGGACGATGATGAGTGA 2136 0.4593 MRIFTTPLSTSDTGGNNNSTLFFESFSSSAIVSQENRETSIMFPINNNNPAAEIIHINDEEPDLESSFIEGNLNSFSSILPTMEQTNQDASNLLTLQRNLRINTANNNNRQDGVSLDLSLHQFGGDGGGSSSTMDVISGSAGGGGGGDGLLTSVLNNTSTRRIMPIKRTAPDYARREFTVGESSSAGGAGGGSVAQPMAAPKRRPTANENAALRVSSSSNTCTCTPSPTCALHASANNNLSSSSREQPHETANNNNNPQNVVRVPSSLWPISEVQRALQSDSFQVLQPTATTTPPPPPPPPSSSNNNNNNTTLGIMQLGDGSFIYPQPVFDSSHHHHQIHHGHQHTPINSLYHQGYQRFFSTAGTSPFRPASINYMENLPPPHHHPYAGSSSSSSSPSPLPWSTVIRPRAVPVSLTHRVGGSNRESNNTRNNYPFSSPAGRGTITVTQNRGNSSSSSLFPGGSPSTRLLESLVQNAGTPSSGSGGGQNNTAGTTVGAVPAVQQLSNVARAWIRRLNAHDEALTRTSQSSTPDITPHRALRASPIAEMYNLPTYFADDSRRLRQEIRTAIDHLRNGGSVRLEELLILDYSIVLNLLDNIEEEEDDVPQQFYEYLGDGQRVTNPDLGLTETEVAICIGREIFQTVGEQPQNIDACGICQEDYVHGEELGRLDCAHRYHLSCIRQWLLIKNRCPICKKMALTIIDLEDDEDDDE 711
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu05g00662 711 MobiDBLite consensus disorder prediction 290 304 - -
Adu05g00662 711 CDD RING-H2_TTC3 653 694 - -
Adu05g00662 711 PANTHER E3 UBIQUITIN-PROTEIN LIGASE HIP1-RELATED 225 698 - -
Adu05g00662 711 SMART ring_2 653 693 IPR001841 -
Adu05g00662 711 MobiDBLite consensus disorder prediction 387 402 - -
Adu05g00662 711 MobiDBLite consensus disorder prediction 377 403 - -
Adu05g00662 711 ProSiteProfiles Zinc finger RING-type profile. 653 694 IPR001841 -
Adu05g00662 711 MobiDBLite consensus disorder prediction 419 466 - -
Adu05g00662 711 MobiDBLite consensus disorder prediction 210 263 - -
Adu05g00662 711 MobiDBLite consensus disorder prediction 287 316 - -
Adu05g00662 711 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 637 698 IPR013083 -
Adu05g00662 711 PANTHER E3 UBIQUITIN-PROTEIN LIGASE RNF165 225 698 IPR045191 GO:0061630
Adu05g00662 711 MobiDBLite consensus disorder prediction 180 263 - -
Adu05g00662 711 Pfam Ring finger domain 652 694 IPR001841 -
Adu05g00662 711 SUPERFAMILY RING/U-box 652 701 - -
Adu05g00662 711 MobiDBLite consensus disorder prediction 417 466 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu05g00662 Adu-Chr5 7674638 7678507 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu05g00662 564 698 C3H Transcription Factor Family AT2G15530 38.889 3.90e-25 109
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu05g00662 - - adu:110280903 1270.37