Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu05g00658 ATGCTCCCAATTAACAATAATAAAGCTGATGCTAAAATAATTTACATCAGTGACGAAGAACCAGATCATGAATCATTATTGTCAGAGGTCAACATTAATTCTGCCCCTTCAATTTTATCAACAACGGAACAAACCAATCAACCTGCCTCAAATCTTTTAACATTACAAAGAAATTTGGAAATCAGCACCGCCAACAACAACCACCAACAAGATGGTGTGTCACTCGATTTATCCTTACACCAGTTTGGCGGTGATGGTGGTGGCAGCTCTTCTACTATTGATGTCACTGATGGCGGCACTGGTGGTGGTGGTGGAGGTGGAGATGGTCTCTTGAGGAGCGTTCTCAACAATACTTCTACTAGGCGCATCATCATCATGCCTATCAAAAGAACTGCACCTGATTACGCTCACCGAGAGTTTACGGTGGGTGAGAGCTCAAGTGCCGGTGGTGCTGCTGGTGGTTCTGTTGCTCAACCTATGGCAGCCCCAAGCGCCGCCCCATCGCAAATGAAAATGCGGCGGGAACAACGCCATGAAACTGCTAACAACAACAACAGCCCCCAAAATGTTGTTCGTATTTCTGAGGTGCAACGAGCTCTTCAGTCTGATAGCTTTCAAGTCCTTCAACCTACTCCTCCTCCTAACAACAACAACAACAACAACAACGCAACACTTGGTATTCTTCAACTTGATGATGGTTCCTTTATTTACCCGCAACCTGTTTTTGATAGTAGCCACCACCACCAACTCCACCATGGCCATCAGGACGCGCCAATTAATTCGTTTTACCACCATGGCCATCAACGTTATTTCTCCTCTGCTGACACTTCTCCATTCCGCCCAGTCTCAATCAATTACATGGAAAATCTTCCGCATCATCAGTACGCCGGTTCTTTGTCTTCATCTCCTTCCCCTCTTCCTTGGAGCACCGTGATTACGCCAAGGGCTATTCCCTCTGTGTCTCTCCCTCACGGAGTTGGAGGAAGTAACAGAGAATCTGACACCAGAAACAACTATCCATCTGGAAGGGGAATAATCACTGAGACTCACAATCGTGGAAACTCATCATCATCAACACAGCTAGTGGAAAGCCTTGTACAAAACGCTGGTACCCCTTCTGCATTTCAGCACCTGTCGGACGCTGCTCTTGCATGGATTGGAAGGCTGAACTCTCATGACGAGACCTTGACGAGAATGTCATCATCTTCTACCACTGATAATACTCATCACAGGCCATTACGAGCTTCTGCTATTGCTGAGACCTATAATTTGCCTACTTATTTTGCTGATGATTCAAGAAGGCTTAGAAGAGAGCCTCTGGAAGACGGGCAGCGAGTGACGAACCCCGATGTAGGACTGACGGAAACTGAGGAGGACTATGTTCACGGTGAAGAGCTTGGGAGATTGGATTGTGCGCACAAATATCACCTTTCTTGCATCAGGCAGTGGTTGCTTATCAAGAACAGATGGCCCGTTTGCAAGAAAATGGCTCTCACCATCATAGACTTGGAGGATGACGAGTAA 1524 0.4652 MLPINNNKADAKIIYISDEEPDHESLLSEVNINSAPSILSTTEQTNQPASNLLTLQRNLEISTANNNHQQDGVSLDLSLHQFGGDGGGSSSTIDVTDGGTGGGGGGGDGLLRSVLNNTSTRRIIIMPIKRTAPDYAHREFTVGESSSAGGAAGGSVAQPMAAPSAAPSQMKMRREQRHETANNNNSPQNVVRISEVQRALQSDSFQVLQPTPPPNNNNNNNNATLGILQLDDGSFIYPQPVFDSSHHHQLHHGHQDAPINSFYHHGHQRYFSSADTSPFRPVSINYMENLPHHQYAGSLSSSPSPLPWSTVITPRAIPSVSLPHGVGGSNRESDTRNNYPSGRGIITETHNRGNSSSSTQLVESLVQNAGTPSAFQHLSDAALAWIGRLNSHDETLTRMSSSSTTDNTHHRPLRASAIAETYNLPTYFADDSRRLRREPLEDGQRVTNPDVGLTETEEDYVHGEELGRLDCAHKYHLSCIRQWLLIKNRWPVCKKMALTIIDLEDDE 507
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu05g00658 507 PANTHER E3 UBIQUITIN-PROTEIN LIGASE RNF165 458 498 IPR045191 GO:0061630
Adu05g00658 507 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 456 498 IPR013083 -
Adu05g00658 507 PANTHER E3 UBIQUITIN-PROTEIN LIGASE HIP1-RELATED 458 498 - -
Adu05g00658 507 MobiDBLite consensus disorder prediction 320 360 - -
Adu05g00658 507 SUPERFAMILY RING/U-box 458 500 - -
Adu05g00658 507 MobiDBLite consensus disorder prediction 326 360 - -
Adu05g00658 507 MobiDBLite consensus disorder prediction 86 110 - -
Adu05g00658 507 MobiDBLite consensus disorder prediction 144 190 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu05g00658 Adu-Chr5 7623418 7625769 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu05g00658 456 498 C3H Transcription Factor Family AT2G15530 51.163 3.32e-11 63.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu05g00658 - K22753 aip:107640059 715.301