Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu05g00652 ATGACAAGTGTTAAAGTGATTTCAACAAGCACAATCCATGTAGCAAACAAGGATTCAACGGTGGAGGAGGAGATTCAGTTAACTCCATGGGATCTCCAATTCCTCCTATTTGATCCCATTCAAAAAGGTCTTCTCTTCTGGAACAACCCCATCACTACTCCACCAATCATAATCCAACGCCTCAAACATTCCCTTTCGTCCACCCTTTCTTTCTTCCCACTCCTCGCGGGCCGCCTTTCCGTTACGGAACACGATGACAACACTTCCTCCGTTTCCGTTATTTGCAACAACTCCGGAGCGCTGTTTGTCCATGCCGTTGCGGATAAATACTCCGTTAATGATATCGTTAGTTCCGTTTACACTCCACGCTTTGTGCACTCTTTGTTCCCGCTCAACCGGGTTAGAAACCACGAAGGAATAACCAAGCCGTTGTTGGCGGTTCAAGTCACCGAGCTCAACGACGGTTTCTTCGTTGGGTGCGCCATGAACCACGTTGTTGGAGACGGATCTTCCTTTTGGCATTTCATGAACTCTTGGGCCGAGATCTCACGTGGTTCGGAAGAATTGTCCAAGCCTCCCGTGCTTGAACGCTGGTTCCTTGACAGCTCCGCCTCTGCCATACGCGTTCCTTTGACGAAGGAGAAGATGATCCAAAGTGGTTACGACGGTTTCGTCCCAGAACCTCAATGCGAGAGGGTTTTCCATTTCAGCAAAGACAAGATCGCTGAACTCAAGGCAAAAGCCAACGCAGAAATTGAAGGCGAAAGCAAAAACAAAATATCTTCGCTGCAAGCGCTTTTGACTCACCTGTGGAGATCCGTGGTTGGGAGCCAGGGTCTTGAGCCCGAAGAAGAAGGTGCGTTGGAGTTGAACAAGATAGTTGGTTTGCACACGGAGGAGAAGATGAAGAGCTACTATAGGGGTTGGGCGGAGAACCCTAGGCTTCTGACGATGCGAGGTTTGGGGGGAAACAATACTTTAGTGACAAGCAGTTCGCCGAGGTTTGATGTTTATGGGAATGATTTTGGGTGGGGGAAACCGGTGGCAGTGAGGAGCGGAGCCGGGAACAAGATCCATGGCACCATAACGGTTTATGCTGGGGCGGAAGATGGTGTTGACTTTGAAGTTTGTCTTTCATATGAGACATTGGAGGCTATGGGTAATAACCCTGGCTTCATGGACGCCTTCTCCGCC 1194 0.495 MTSVKVISTSTIHVANKDSTVEEEIQLTPWDLQFLLFDPIQKGLLFWNNPITTPPIIIQRLKHSLSSTLSFFPLLAGRLSVTEHDDNTSSVSVICNNSGALFVHAVADKYSVNDIVSSVYTPRFVHSLFPLNRVRNHEGITKPLLAVQVTELNDGFFVGCAMNHVVGDGSSFWHFMNSWAEISRGSEELSKPPVLERWFLDSSASAIRVPLTKEKMIQSGYDGFVPEPQCERVFHFSKDKIAELKAKANAEIEGESKNKISSLQALLTHLWRSVVGSQGLEPEEEGALELNKIVGLHTEEKMKSYYRGWAENPRLLTMRGLGGNNTLVTSSSPRFDVYGNDFGWGKPVAVRSGAGNKIHGTITVYAGAEDGVDFEVCLSYETLEAMGNNPGFMDAFSA 398
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu05g00652 398 PANTHER FAMILY REGULATORY PROTEIN, PUTATIVE (AFU_ORTHOLOGUE AFUA_3G14730)-RELATED 3 285 - -
Adu05g00652 398 Gene3D - 1 223 IPR023213 -
Adu05g00652 398 PANTHER FAMILY REGULATORY PROTEIN, PUTATIVE (AFU_ORTHOLOGUE AFUA_3G14730)-RELATED 286 395 - -
Adu05g00652 398 PANTHER ANTHRANILATE N-HYDROXYCINNAMOYL/BENZOYLTRANSFERASE-LIKE PROTEIN 286 395 - -
Adu05g00652 398 Pfam Transferase family 291 389 - -
Adu05g00652 398 Pfam Transferase family 3 288 - -
Adu05g00652 398 PANTHER ANTHRANILATE N-HYDROXYCINNAMOYL/BENZOYLTRANSFERASE-LIKE PROTEIN 3 285 - -
Adu05g00652 398 Gene3D - 224 289 IPR023213 -
Adu05g00652 398 Gene3D - 290 388 IPR023213 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu05g00652 Adu-Chr5 7410130 7411461 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu05g00652 59 290 Monolignol Biosynthesis Gene Families AT5G48930 31.855 1.41e-21 94.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu05g00652 - - pvy:116114536 406.757