Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu05g00649 ATGAATTGTGGGGCCCACTGCGTAGGTACTGTTTCCACTTGGGGAAAACAAGCTGTTGAACCACACCCTCGTCTCACTTCTATTATGGGAAGGGAATACAAAGATCCTTCACCTTCTCCCTCTTTATTATTGCCCTTTTTCCCAACACCTACCCTTCTCTCCAGTCCTAGTAGCTACCTGAAACAAGTGTTCAAACTTGAAACAAGAAACGGAAGAATGTGGGATCTGAATGACTCTCCCGACCACAGAAAGGACTACGACTCTGAAGAAGCTTGTTCTTCACCCAAGACTGCCACTACTTCCATGGACGATGACGTCAGAGGCAAGACCCTCCGATCTGCCTCCAATTCCAGCTCCTCTGCAGTCCTCCTAGAAGACGGATCCGAAGAAGACGAAGAACAAGCCAGCAGAACAACAACTACTCTCAACAACATCAACAGTACCAGCAAGATATTCGGCTTCTCCGTCACCCCCATGGACGGCGACGACAACCCTCCCGTGACCCATCAGTTTTTCCCGGTGGAGGACTCCGGCTGTGGCGGAGGAGGAGGAGGAAGCTCGTCGTCGTCGTCGTTCCCTCGAGCGCACTGGGTTGGCGTGAAGTTCTGCCAATCGGAAGCAGCAGTTGGGGGCGGTGGGAAATCGGCGGCGGTGGAAGTATCTCAGCCTATGAAGAAGAGCCGGAGAGGACCAAGGTCTCGGAGCTCACAGTATAGAGGAGTGACCTTTTACCGAAGAACGGGTCGTTGGGAATCTCATATTTGGGATTGTGGAAAACAAGTTTATCTGGGTGGATTTGACACCGCACATGCAGCTGCTCGTGCTTATGATAGAGCGGCAATTAAGTTCCGCGGAGTGGAGGCTGACATTAACTTCAACATAGAAGACTACGAAGAAGACTTGAAGCAGATGACGAATTTGACAAAGGAAGAATTTGTGCACGTGCTTCGGCGACAAAGCACTGGCTTTCCAAGAGGAAGTTCCAAATATAGAGGCGTTACCTTGCACAAGTGTGGAAGATGGGAGGCTCGTATGGGCCAATTTCTAGGCAAAAAGTATGCCCCCTCTTCCCCCCCCTCCCCTTCAATTTCATCTATTTTGCTAAGCTACCCTCAATTTTATTTTATTTTATTAGGTACGTTTATCTGGGCCTCTTTGACACTGAGATTGAAGCTGCCAGGGCATATGACAAAGCAGCAATCAAATGCAATGGCAAAGAGGCCGTCACCAATTTTGATCCCAGCATCTATGAAAACGAGCTTAATTCTGAATCGTCAGGAGGCAACGGTGCAGCAGATCACAATCTGGATCTAA 1314 0.4924 MNCGAHCVGTVSTWGKQAVEPHPRLTSIMGREYKDPSPSPSLLLPFFPTPTLLSSPSSYLKQVFKLETRNGRMWDLNDSPDHRKDYDSEEACSSPKTATTSMDDDVRGKTLRSASNSSSSAVLLEDGSEEDEEQASRTTTTLNNINSTSKIFGFSVTPMDGDDNPPVTHQFFPVEDSGCGGGGGGSSSSSSFPRAHWVGVKFCQSEAAVGGGGKSAAVEVSQPMKKSRRGPRSRSSQYRGVTFYRRTGRWESHIWDCGKQVYLGGFDTAHAAARAYDRAAIKFRGVEADINFNIEDYEEDLKQMTNLTKEEFVHVLRRQSTGFPRGSSKYRGVTLHKCGRWEARMGQFLGKKYAPSSPPSPSISSILLSYPQFYFILLGTFIWASLTLRLKLPGHMTKQQSNAMAKRPSPILIPASMKTSLILNRQEATVQQITIWI 437
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu05g00649 437 CDD AP2 237 294 IPR001471 GO:0003700|GO:0006355
Adu05g00649 437 SMART rav1_2 237 299 IPR001471 GO:0003700|GO:0006355
Adu05g00649 437 Pfam AP2 domain 237 285 IPR001471 GO:0003700|GO:0006355
Adu05g00649 437 ProSiteProfiles AP2/ERF domain profile. 237 293 IPR001471 GO:0003700|GO:0006355
Adu05g00649 437 PANTHER AP2 DOMAIN TRANSCRIPTION FACTOR 73 353 - -
Adu05g00649 437 SUPERFAMILY DNA-binding domain 236 294 IPR016177 GO:0003677
Adu05g00649 437 MobiDBLite consensus disorder prediction 214 236 - -
Adu05g00649 437 PANTHER AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR 73 353 - -
Adu05g00649 437 MobiDBLite consensus disorder prediction 72 91 - -
Adu05g00649 437 MobiDBLite consensus disorder prediction 72 139 - -
Adu05g00649 437 Gene3D AP2/ERF domain 236 295 IPR036955 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu05g00649 Adu-Chr5 7337381 7344440 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu05g00649 73 354 AP2-EREBP Transcription Factor Family AT4G36920 66.897 2.48e-100 304
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Adu05g00649 AP2 6.1e-10 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu05g00649 K09284 - gmx:100801975 399.438
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu05g00649 05 7337381 7344440 Adu05g00649 05 7337381 7344440 ECH
Adu05g00649 05 7337381 7344440 Adu01g01000 01 14665001 14667610 PCT