Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu05g00624 ATGCCACCCCAACAACCCCTCCTGGAGCCAGAAGAGGACACGGCCTACGACTCCTCCGAGAAGGTGGTGGTGGCGGTGGGAGTGGAGGATGAGTACGGCGATGACGTGGAGGCGCCGCCCTTCTCGTGGAAGAAACTGTGGCTGTTCACTGGGCCGGGGTTCTTGATGAGCATAGCGTTTCTTGACCCAGGGAACTTGGAGGGGGATCTTCAGTCGGGTGCGATTGCAGGCTACTCGCTGCTCTGGCTGCTCATGTGGGCCACGCTAATGGGCCTTCTGATTCAGCTGCTTTCGGCCAGGCTCGGGGTGGCCACAGGGCGGCACCTGGCTGAGCTGTGCAGGGAGGAGTACCCGCCATGGGCCAGGATTGTGTTGTGGCTCATGACTGAGTTGGCTCTTATTGGCTCCGACATACAAGAGGTTATTGGCAGCGCTATTGCTATCCGGATTCTCAGTAACGGATTTGTTCCTCTATGGGCTGGTGTCGTCATTACTGCTCTTGATTGTTTTATTTTTCTATTTCTCGAGAACTATGGTGTGAGGAAATTGGAGGCATTTTTTGCTGTTCTGATTGGCATAATGGCGCTCTCATTTGCATGGATGTTCGGTGAAGCAAAACCCAATGGGGTTGATGTTCTTCTTGGTGTTTTGGTTCCTAAACTTAGCTCCAGAACTATAAAGCAAGCTGTTGGAGTTGTTGGTTGCATCATTATGCCTCACAACGTGTTCTTGCATTCCGCTCTCGTTCAGTCAAGGCAGATTGATCAAAGCAAGAAAGGCCGCGTTCAAGAAGCTCTTAATTACTACTCCATAGAGTCCACCTTGGCCCTTGCAGTCTCTTTCATCATCAATATTTTCGTCACGACTGTGTTTGCCAAGGGCTTTTACGGTACTGAAATAGCCGATAGTATTGGTCTTGTAAATGCAGGGACTTATCTTCAGGAGAAATATGGGGGTGGATTATTCCCAATCCTATATATATGGGGCATTGGTTTGTTAGCAGCAGGGCAAAGTAGCACTATAACTGGTACATATGCTGGGCAATTCATCATGGGAGGTTTTCTCAATTTAAGGCTGAAGAAATGGGTGAGGGCGTTAATTACCCGATGCTGCGCAATCATCCCAACCATGATAGTCGCTCTTATCTTTGATACCTCGGAGGAATCTTTAGATATCCTGAATGAATGGCTTAATGTTCTTCAGTCAGTTCAAATCCCATTTGCTCTTATTCCCTTGCTTTGCTTGGTGTCCAAGGAACAGATAATGGGCACTTTCAGAATTGGTCCTGTCCTCAAGATTTTTTCTTGGCTGGTCGCTGCTCTGGTGATAGTGATCAATGGCTATCTTTTGCTAGACTTCTTCTCCTCTGAAGTGAATGGAGCAGTGTTTGCCGTTGTAGTGTGTGCACTAACAGCTGCTTATGTTGCATTTGTAATATACCTTATTGCGCGTGCTGTTTCCTTTTCGCCTTGGCAAAGTTTAGATCGATCAAAGGGAACTAGCACAGAGAACTGA 1515 0.4799 MPPQQPLLEPEEDTAYDSSEKVVVAVGVEDEYGDDVEAPPFSWKKLWLFTGPGFLMSIAFLDPGNLEGDLQSGAIAGYSLLWLLMWATLMGLLIQLLSARLGVATGRHLAELCREEYPPWARIVLWLMTELALIGSDIQEVIGSAIAIRILSNGFVPLWAGVVITALDCFIFLFLENYGVRKLEAFFAVLIGIMALSFAWMFGEAKPNGVDVLLGVLVPKLSSRTIKQAVGVVGCIIMPHNVFLHSALVQSRQIDQSKKGRVQEALNYYSIESTLALAVSFIINIFVTTVFAKGFYGTEIADSIGLVNAGTYLQEKYGGGLFPILYIWGIGLLAAGQSSTITGTYAGQFIMGGFLNLRLKKWVRALITRCCAIIPTMIVALIFDTSEESLDILNEWLNVLQSVQIPFALIPLLCLVSKEQIMGTFRIGPVLKIFSWLVAALVIVINGYLLLDFFSSEVNGAVFAVVVCALTAAYVAFVIYLIARAVSFSPWQSLDRSKGTSTEN 504
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu05g00624 504 PRINTS Natural resistance-associated macrophage protein signature 125 151 IPR001046 GO:0016020|GO:0030001|GO:0046873
Adu05g00624 504 PRINTS Natural resistance-associated macrophage protein signature 155 174 IPR001046 GO:0016020|GO:0030001|GO:0046873
Adu05g00624 504 PRINTS Natural resistance-associated macrophage protein signature 180 201 IPR001046 GO:0016020|GO:0030001|GO:0046873
Adu05g00624 504 PRINTS Natural resistance-associated macrophage protein signature 229 252 IPR001046 GO:0016020|GO:0030001|GO:0046873
Adu05g00624 504 PRINTS Natural resistance-associated macrophage protein signature 336 355 IPR001046 GO:0016020|GO:0030001|GO:0046873
Adu05g00624 504 PRINTS Natural resistance-associated macrophage protein signature 364 381 IPR001046 GO:0016020|GO:0030001|GO:0046873
Adu05g00624 504 PRINTS Natural resistance-associated macrophage protein signature 398 417 IPR001046 GO:0016020|GO:0030001|GO:0046873
Adu05g00624 504 Pfam Natural resistance-associated macrophage protein 67 428 IPR001046 GO:0016020|GO:0030001|GO:0046873
Adu05g00624 504 PANTHER METAL TRANSPORTER NRAMP3 PROTEIN 9 502 - -
Adu05g00624 504 TIGRFAM nramp: metal ion transporter, metal ion (Mn2+/Fe2+) transporter (Nramp) family 44 422 IPR001046 GO:0016020|GO:0030001|GO:0046873
Adu05g00624 504 Hamap Divalent metal cation transporter MntH [mntH]. 33 454 IPR001046 GO:0016020|GO:0030001|GO:0046873
Adu05g00624 504 PANTHER SOLUTE CARRIER PROTEIN FAMILY 11 MEMBER 9 502 IPR001046 GO:0016020|GO:0030001|GO:0046873
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu05g00624 Adu-Chr5 6971910 6975207 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu05g00624 28 491 Inorganic Solute Cotransporters AT2G23150 79.193 0.0 778
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu05g00624 K21398 - gmx:100789871 892.493
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu05g00624 05 6971910 6975207 Adu05g00624 05 6971910 6975207 ECH
Adu05g00624 05 6971910 6975207 Adu01g01054 01 16833923 16844933 PCT