Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu05g00616 ATGTTGGAGCTCTGTCGAAAACCGTTGATGTGCTTCTTCTCATGTGGACTAGGAGGAGGCAACTATGACGATGAGCTTCTATGGGACTTAGAGTTGAAGCCACACACCGCAGGTGAATATTCAATTGCTGTTGTTCAAGCCAATTCTTCTTTGGAAGACCAAGCACAGGTGTTTACTTCTCCCTTTGCAACTCTTGTTGGTGTTTATGACGGCCATGGTGGACCTGAAGCTTCTCGTTTCATCACCAACCATCTCTTCTCCTTCATTCACATGTTCTCTGCAGAGGATGGTGGGTTATCGGAGCAAGTGATAAAGAAAGCTTTCAGTGCAACTGAAGAGGAGTTCTTGCGTATGGTGAAGCAATCATGGATTTCGCAGCCACACATTGCTTCGGTGGGATCGTGTTGTATTCTTGGAGCAATTTCAAACGATGTTCTCTATGTTGCTAACCTTGGAGACTCGAGGGCAGTTCTCGGTCGCAAAGCATTCGGAGGAAACGAGGTTAGTTGCGGTCATAATGTGGTGGCAGAGCGTTTGTCCACTGATCATAATGTTGGAGTGGAGGAGGTGAGAAAGGAGGTTGAGGCTCTTCACCCTGATGATGATTATGTTGTGGTTAATGCTAATGGAGTTTGGAGAATCAAGGGGATTATTCAGGTCTCAAGATCAATTGGAGATGTTTATCTAAAGAAGCCAGAGTTCGACAACAAGTCTATAATGTTCCAGCAATGTGTGTCCCCGGTACCTTTAAAGAGAGCCGTGATGACGGCGGAGCCATCAATATTAACTCGAAAGTTGAAGGCGGAGGATTTGTTTCTGATCTTCGCATCGGACGGACTTTGGGAGCAATTAACGGACAAAGAAGCCGTTGAAATCGTGTCTAGAAGTCCAAGAAAAGGGATAGCAAAAAGATTGGTGAGAGCTGCACTAGAAGCTGTTGCAAAGAAAAAAGAAATGAGATATAAGGATTTAAAGAAAATTGAGAAAGGTGTAAGGCGCCATTTCCATGATGATATTACAGTGATTGTTATATACCTTGATCATTCACAAAATTCTGTGAATGGTAGTAGGCCAAGACATCAAGGAATCTATGATTCTGTTAATGCTCCTGTAGATATCTACTCTATTAATGCAGATAGGTAA 1143 0.4331 MLELCRKPLMCFFSCGLGGGNYDDELLWDLELKPHTAGEYSIAVVQANSSLEDQAQVFTSPFATLVGVYDGHGGPEASRFITNHLFSFIHMFSAEDGGLSEQVIKKAFSATEEEFLRMVKQSWISQPHIASVGSCCILGAISNDVLYVANLGDSRAVLGRKAFGGNEVSCGHNVVAERLSTDHNVGVEEVRKEVEALHPDDDYVVVNANGVWRIKGIIQVSRSIGDVYLKKPEFDNKSIMFQQCVSPVPLKRAVMTAEPSILTRKLKAEDLFLIFASDGLWEQLTDKEAVEIVSRSPRKGIAKRLVRAALEAVAKKKEMRYKDLKKIEKGVRRHFHDDITVIVIYLDHSQNSVNGSRPRHQGIYDSVNAPVDIYSINADR 380
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu05g00616 380 CDD PP2Cc 46 346 IPR001932 -
Adu05g00616 380 ProSitePatterns PPM-type phosphatase domain signature. 65 73 IPR000222 GO:0043169
Adu05g00616 380 Coils Coil 307 327 - -
Adu05g00616 380 Gene3D - 30 354 IPR036457 -
Adu05g00616 380 SMART PP2C_4 31 344 IPR001932 -
Adu05g00616 380 PANTHER ALPHABET, ISOFORM E-RELATED 3 379 - -
Adu05g00616 380 Pfam Protein phosphatase 2C 65 312 IPR001932 -
Adu05g00616 380 ProSiteProfiles PPM-type phosphatase domain profile. 39 346 IPR001932 -
Adu05g00616 380 PANTHER PROTEIN PHOSPHATASE 2C 63-RELATED 3 379 - -
Adu05g00616 380 SUPERFAMILY PP2C-like 45 348 IPR036457 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu05g00616 Adu-Chr5 6823222 6825979 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu05g00616 24 355 PP2C-type Phosphatase Gene Family AT3G51370 53.959 3.29e-131 379
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu05g00616 - K01102 gmx:100802394 565.459
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu05g00616 05 6823222 6825979 Adu05g00616 05 6823222 6825979 ECH
Adu05g00616 05 6823222 6825979 Adu09g02610 09 113565727 113568029 PCT