Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu05g00602 ATGCAATATACACTCACTACCTTCTCTAACTCTTCAATGACGCAATTCACCACAAAAATACCACCACCTTTGCATCCCTACAACTTTTCATTTTCAAACCCTAATAATAATAATATTATGAACAAGAACCAACAAATTCCTAGGACTAGGCCCTGNNNNNNNNNTAAGTCACTACCTACTTCCACCACCTTCGGTGACGCCACTTGCATGGAACAGTTACTTGTTCACTGCGCCAACGCTATTGAAACCAACGACGTAACCCTCGCTCAGCAGATTCTCTGGGTTCTAAACAACATAGCTCCACCTGACGGCGATTCCAATCAGCGACTCGCCGGAAGCTTCCTCAGAGCCCTAACCGCACGCGCCGCGAATACTGGAAGCTGCAAGATGCTCGCCGCTGTAGCTGACGCCGCTGCTAGCCGTAACAGCCTCGCCATCGAAACGCACAGATTCTCTGTCATCGAGCTGGCAAACTTCGTTGACCTCACTCCATGGCACAGGTTCGGGTTCACCGCCGCCAACGCCGCCATTTTAGAAGCCACGGAAGGGTTCTCGGTGATCCACATCGTGGATTTGAGCTTGACGCACTGCATGCAGATCCCGACGCTGATCGACGCCATCGCTGGCCGCCACGAGGTGCCTCCTGTAATCAAGCTCACGGTTCCCGGTGCCGCCTTCAGAGAAGGTAACATCAATATCCCTCCATTACTCGATCTTTCTTACGAGGAATTAGGCGCGAAGTTGGTCAACTTCGCTAGGTCGAAGAACGTGGTCATGGAATTCAGCGTTGTTTCTTCGAGTTACGCTGATGGATTCGCCTCTTTGATCGAACACCTGAGAGTGCAACATATAGTTTCCGTTGCAGAAGGTCATCGTCCAAACGAAGCTTTGGTTATTAACTGTCACATGATGCTTCATTACATTCCCGATGAAACTGCACTAGTTCATCATCATCATGAAACAGATTCGAATTTAAACCCTTTTATTGTTCATGATTACTCTTCTTCTTCGTCATCTCCTTCATCTTCATCGTCGTCATTGCGGTCAATGTTTCTTAAGGCGGTTCGGAGTTTGGAACCTACAATTATGATTTTGGTAGATGAGGACGTGGATTTGATATCAAATAACTTGGTGTGTAGGCTAAGGTCTGCGTTCAATTATCTGTGGATACCGTACGACACGGTGGACACGTTCCTTCCTCGAGGCAGCAAGCAAAGGCAGTGGTATGAAGCTGACATATGTTGGAAGATTGAGAACGTGATAGCGCATGAAGGGGCTGAGAGGGTGGAGAGGGTTGAGCCCAAGAGCAAGTGGGAGCAAAGGATGAGGAATGCGAGCTTCCATGGGATTGGATTCAGTGAGGAATCGATTTCTGAGGTGAAGGGGATGCTGGATGAACATGCTGCTGGTTGGGGTGTTAAGAAGGAAGATGACAATCTTCTTCTCACTTGGAAAGGCCATAATGTTATCTTTGCTTCAGCTTGGTTACCTGCTTAG 1497 0.4783 MQYTLTTFSNSSMTQFTTKIPPPLHPYNFSFSNPNNNNIMNKNQQIPRTRPXXXXKSLPTSTTFGDATCMEQLLVHCANAIETNDVTLAQQILWVLNNIAPPDGDSNQRLAGSFLRALTARAANTGSCKMLAAVADAAASRNSLAIETHRFSVIELANFVDLTPWHRFGFTAANAAILEATEGFSVIHIVDLSLTHCMQIPTLIDAIAGRHEVPPVIKLTVPGAAFREGNINIPPLLDLSYEELGAKLVNFARSKNVVMEFSVVSSSYADGFASLIEHLRVQHIVSVAEGHRPNEALVINCHMMLHYIPDETALVHHHHETDSNLNPFIVHDYSSSSSSPSSSSSSLRSMFLKAVRSLEPTIMILVDEDVDLISNNLVCRLRSAFNYLWIPYDTVDTFLPRGSKQRQWYEADICWKIENVIAHEGAERVERVEPKSKWEQRMRNASFHGIGFSEESISEVKGMLDEHAAGWGVKKEDDNLLLTWKGHNVIFASAWLPA 498
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu05g00602 498 ProSiteProfiles GRAS family profile. 61 496 IPR005202 -
Adu05g00602 498 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 50 496 IPR005202 -
Adu05g00602 498 Pfam GRAS domain family 70 495 IPR005202 -
Adu05g00602 498 PANTHER SCARECROW-LIKE PROTEIN 32 50 496 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu05g00602 Adu-Chr5 6689225 6691358 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu05g00602 65 497 GRAS Transcription Factor Family AT3G49950 56.422 4.81e-170 484
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Adu05g00602 GRAS 2.3e-89 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu05g00602 - - adu:107487668 930.243