Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu05g00592 ATGGTGGCTATGAAGGAGGTGATTCCAAGGACAGGCCCGTTCTTTGTGTCGGCGTTCTGGCTAATACCTGCCGGGTTCCTCCTCATCGGGTTCGCTGCTTCAAGGGGAAGACCGTTCCCTTCGGGACTCAATGCCTGGCTCTCAATCTCTCTCTTTGCATTAGTTGATGCAGCTTGCTTTCAGAATGAAGGGGAATTGAAAGCAATGCTAATTGATTGGAATGCTTTAAGAATTGGCATATTGCATGCTTTGATTCCAGACTCATTCAAGTTCCTATCCAAGGCTACGGGGACTGCTGTCGATTGGGTCCAGATGCCTGGGATGAAGCCTGGTCCGGATTCGGTTGGGATCTTTGCCATTTCACAAAGTTGCAGTGGAGTGGCAGCTCGAGCCTGCGGTCTTGTTAGTTTAGAACCTACAAAGATTGCGGAGATCCTGAAAGATCGTCCATCTTGGTTTCGGGAGTGTCGGAGCCTAGAGGTTTTCACAATGTTCCCTGCGGGTAATGGAGGGACCATTGAACTTGTGTACACACAGACATATGCTCCAACGACACTGGCTCCTGCCCGGGATTTCTGGACTCTCAGATACACTACAAGCCTGGAAAATGGCAATCTTGTGGTTTGTGAGAGATCTCTATCTGGTTCTGGGAGTGGCCCTAATGCAGTTGCTGCTGCTCAGTTTGTAAGGGCTGAAATGCTTCCTAGCGGCTATTTGATTCGACCATGTGAAGGTGGAGGGTCAATTATTCACATCGTAGACCACCTAAATCTTGAGGCCTGTAGTGTGCCAGAAGTGTTGCGTCCACTTTACGAATCATCAAAAGTGGTGGCCCAAAAAATGACAATTGCAGCATTTGCTCAGTTACTACGAGCTCCTCATGATGATGCAGAGTCGATAATAAAGGAAAGATGCCACTCTCTCGTGGTTCAACGACTGAATTTCACGGCGGAGGATGTGTTAGAGTGTTTGTCGATGTCTGATAAGATCTTAGGGATGGGGTCCACTGGAACGGTTTACAGAGCGGAAATGCCAGGTGGCGACATCATAGCGGTTAAGAAGCTGTGGGGAAAGCAAAAGGAGAATATCCGACGGAGGAGAGGGGTGCTTGCTGAGGTGGAGGTGTTGGGGAACGTGAGGCACAGGAATATAGTGAGGTTGTTAGGGTGCTGCAGCAACAGAGAGTGCACCATGCTGCTTTACGAGTACATGCCCAATGGGAACTTAGATGACTTGTTGCATGGCAAGAACAAGGGTGATAATCTCGTTTCTGATTGGTTCACTAGGTACAAGATTGCCCTTGGTGTGGCGCAGGGGATTTGCTACCTTCACCATGATTGTGATCCTGTTATCGTGCATCGCGATCTAAAACCTAGTAATATATTGCTAGATGCTGACTTGGAGGCCAGGGTGGCGGATTTTGGGGTGGCTAAATTGATCCAGACCGATGAATCCATGTCTGTCATCGCTGGATCATACGGCTACATTGCCCCCGGTGAGTTTCCTAACTGGTCTTCATTATAA 1524 0.4869 MVAMKEVIPRTGPFFVSAFWLIPAGFLLIGFAASRGRPFPSGLNAWLSISLFALVDAACFQNEGELKAMLIDWNALRIGILHALIPDSFKFLSKATGTAVDWVQMPGMKPGPDSVGIFAISQSCSGVAARACGLVSLEPTKIAEILKDRPSWFRECRSLEVFTMFPAGNGGTIELVYTQTYAPTTLAPARDFWTLRYTTSLENGNLVVCERSLSGSGSGPNAVAAAQFVRAEMLPSGYLIRPCEGGGSIIHIVDHLNLEACSVPEVLRPLYESSKVVAQKMTIAAFAQLLRAPHDDAESIIKERCHSLVVQRLNFTAEDVLECLSMSDKILGMGSTGTVYRAEMPGGDIIAVKKLWGKQKENIRRRRGVLAEVEVLGNVRHRNIVRLLGCCSNRECTMLLYEYMPNGNLDDLLHGKNKGDNLVSDWFTRYKIALGVAQGICYLHHDCDPVIVHRDLKPSNILLDADLEARVADFGVAKLIQTDESMSVIAGSYGYIAPGEFPNWSSL 507
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu05g00592 507 Pfam START domain 91 287 IPR002913 GO:0008289
Adu05g00592 507 Pfam Protein kinase domain 328 498 IPR000719 GO:0004672|GO:0005524|GO:0006468
Adu05g00592 507 SMART START_1 82 292 IPR002913 GO:0008289
Adu05g00592 507 SMART serkin_6 325 507 IPR000719 GO:0004672|GO:0005524|GO:0006468
Adu05g00592 507 ProSitePatterns Serine/Threonine protein kinases active-site signature. 451 463 IPR008271 GO:0004672|GO:0006468
Adu05g00592 507 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN ATHB-14 90 297 IPR044830 GO:0003700
Adu05g00592 507 ProSiteProfiles Protein kinase domain profile. 325 507 IPR000719 GO:0004672|GO:0005524|GO:0006468
Adu05g00592 507 SUPERFAMILY Protein kinase-like (PK-like) 328 498 IPR011009 -
Adu05g00592 507 Gene3D Transferase(Phosphotransferase) domain 1 314 503 - -
Adu05g00592 507 Gene3D - 117 292 IPR023393 -
Adu05g00592 507 PANTHER BNAC03G55030D PROTEIN 90 297 - -
Adu05g00592 507 ProSitePatterns Protein kinases ATP-binding region signature. 331 354 IPR017441 GO:0005524
Adu05g00592 507 ProSiteProfiles START domain profile. 102 274 IPR002913 GO:0008289
Adu05g00592 507 SUPERFAMILY Bet v1-like 89 272 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu05g00592 Adu-Chr5 6422426 6425905 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu05g00592 90 286 Homeobox Transcription Factor Family AT5G60690 90.355 4.02e-122 375
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Adu05g00592 START 9.6e-44 CL0209
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu05g00592 K09338 - adu:107495590 385.571