Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu05g00591 ATGCATCCATCACTATACAACATGTTCCCACCATCATTTATTGTAGTTCCAACTGTCACAAATTTTCAGCCTCCTACTCTCTTATATCCTTTTCAATCTACTAATCCAAGAGATACAGATAAAATTCTTAAACTGCTAAAGTCTCCACAACATCATCAGTCTGACTCTGGTACAAATAAAAAGGCATCAAAACAGACAAGTGTACCCGATAAGAAGATATCTACGGCCAAGAGAAGAATTGTTTGGAATTCACATTTGTCTGAAAATAAGGGTGGTGTGAATGCGGCCTCCATTAAAGACCAATTTCCAAAAAATAAAAAAATTCCACCAAGGACCTCACACAAATCTCTAACTGAGGAGCAAAAGGCACTCTTAAAAAAGAGTACACCAAGTGGATATTCTATTAGCATGCCTACTCTAAACCAGAAAAACATCGAGCACAATAAACGGAGAATTGAATGTCCATCTTGGATCCCGGTTTTATTTAAGCCTCCTGCATACATGGATTTTGATGAGTTAGATATTAAAATGGCAACCTATGTGTTTGCACCAAATAAAAGAAGTGATGAGGTATTGGCGACAACAAACAAATTTAGCGGAACTCGTGACAATTTCAAGTCATTAATTCCCAAGGAGTGGGTACATGGGATttctagGGTTGCAAAAGCTTTCCTTACTAAACTTGGAAGGGTGCCTTGTAACAGCTGCATGCTTGGATTCTCTTGCAGTTCCGATGAAAGTGATGATATGGAGGATGTAAGTATAGATGAAGCAGAGGCAGATATAATTAATGCTGGTGGTTTGGAAAAGTTGATAACTGATTTGACCATCGAAGACATATGGGGACTGGTGTTTGATACAGAATCTCAAGTTTGTGAATTTTATGCCAAGTATGCCAAGTGCTATGGATTTGTGTCCCGAAAAGACTTGAAGACGGTGGATGCTAATGGCAACATTAATACAagacaggcgaggattcggttcattcgtcactatagaacggcagactatagggaaatcTCAGGTGAGTTACTTAAGCTAATTTCGAAGGTGCAAAATAAAGGTGATGCACAAGCGAGACTTTCCCCCACTTCAGCGCTAATAGGTGATCCAGCTGTTGTGAAGTCAAAAGGGGCTCCAAGAAAGACCGAAGAAATCAGTCTAAGTGAAGAGACATTAAAAGATAAGACCAACACATCAGGAATAGAAGCGACCGAAGTTCCAGATGCAGCCACAACCAAGATACCAGGATTGCCACAATATCCTATGCATCATTATCCAGTGGTCCTTCCTTATCAACCTTATGGTGGAGTCCTCCCTATTCCTTTTCATCCTGTTCCAAATGGCATGGCGTACTTCAACCAATATCCTTCTACTGCCGGAATTACATCATATCCTCAGTTTTCGCATGTCTCGTCGTATTCTAGTGGACCCCGTGATAGCAATACATGGTCTGGACTTTTGAATGATGTTTGTGAGAGATCTCTATCTGGTTCTGGGAGTGGCCCTAATGCAGTTGCTGCTGCTCAGTTTGTAAGGGCTGAAATGCTTCCTAGCGGCTATTTGATTCGACCATGTGAAGGTGGAGGGTCATTTATTCACATCGTAGACCACCTAAATCTTGAGGTGGCTGCTCTTGTTCCTAAAGGGGAGCTTGATGGTGAAATGGGGGATGCACACATGGCAATGCAGGCTAGGTATGAGTTAAAACCCAGTAATTGCACTGGAATCAGCATTGTTCTGAGGGACTTGAGATTGATTTGGATTATTGCATCTTCTGCCATGAATGTTTGTCCTTTTGGCTTTTATTTACAGATTTTGGGAAGCCAGGTACTTGTCAAGGTTGTGAAGAACAAGCTTGCCCCTCCATTTAAAACTGCTGAGTTTGAGCTTCAATTTGGCGAGGGTATAAATAGAGAATGTGAGATCATAGACTTGAGTGTAAAACACAAAATCATCCTAAAGGCCGGTGCTATGTATTACTTCAATGATAAGAATTTCCGTGGTAGGGATGCTTTTAAGAGTTTCCTGGCCGAGAATCATAGTGCATTTGAAGAACTTCAAATGAAACACAGGGAGAAGCTTCTTGATGATACCGAGGTGGAAAAGGTACAAGATTCAGATGTGACTAGTGATGTCAAAGAAGAAATTACAACAACACTCGAGTCTACCGATGAAGAATCCTCAGCTGCTGTCGAAGCTTGA 2205 0.3982 MHPSLYNMFPPSFIVVPTVTNFQPPTLLYPFQSTNPRDTDKILKLLKSPQHHQSDSGTNKKASKQTSVPDKKISTAKRRIVWNSHLSENKGGVNAASIKDQFPKNKKIPPRTSHKSLTEEQKALLKKSTPSGYSISMPTLNQKNIEHNKRRIECPSWIPVLFKPPAYMDFDELDIKMATYVFAPNKRSDEVLATTNKFSGTRDNFKSLIPKEWVHGISRVAKAFLTKLGRVPCNSCMLGFSCSSDESDDMEDVSIDEAEADIINAGGLEKLITDLTIEDIWGLVFDTESQVCEFYAKYAKCYGFVSRKDLKTVDANGNINTRQARIRFIRHYRTADYREISGELLKLISKVQNKGDAQARLSPTSALIGDPAVVKSKGAPRKTEEISLSEETLKDKTNTSGIEATEVPDAATTKIPGLPQYPMHHYPVVLPYQPYGGVLPIPFHPVPNGMAYFNQYPSTAGITSYPQFSHVSSYSSGPRDSNTWSGLLNDVCERSLSGSGSGPNAVAAAQFVRAEMLPSGYLIRPCEGGGSFIHIVDHLNLEVAALVPKGELDGEMGDAHMAMQARYELKPSNCTGISIVLRDLRLIWIIASSAMNVCPFGFYLQILGSQVLVKVVKNKLAPPFKTAEFELQFGEGINRECEIIDLSVKHKIILKAGAMYYFNDKNFRGRDAFKSFLAENHSAFEELQMKHREKLLDDTEVEKVQDSDVTSDVKEEITTTLESTDEESSAAVEA 734
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu05g00591 734 PANTHER RECA 591 724 IPR013765 GO:0003697|GO:0005524|GO:0006281
Adu05g00591 734 PANTHER RECA 542 583 IPR013765 GO:0003697|GO:0005524|GO:0006281
Adu05g00591 734 MobiDBLite consensus disorder prediction 48 74 - -
Adu05g00591 734 ProSiteProfiles RecA family profile 2. 601 642 IPR020587 GO:0003677|GO:0005524|GO:0006259|GO:0008094
Adu05g00591 734 MobiDBLite consensus disorder prediction 104 120 - -
Adu05g00591 734 MobiDBLite consensus disorder prediction 93 120 - -
Adu05g00591 734 Gene3D - 533 638 IPR027417 -
Adu05g00591 734 PRINTS RecA protein signature 542 571 IPR013765 GO:0003697|GO:0005524|GO:0006281
Adu05g00591 734 PRINTS RecA protein signature 613 642 IPR013765 GO:0003697|GO:0005524|GO:0006281
Adu05g00591 734 PRINTS RecA protein signature 666 683 IPR013765 GO:0003697|GO:0005524|GO:0006281
Adu05g00591 734 PANTHER REPAIR PROTEIN RECA, PUTATIVE-RELATED 591 724 - -
Adu05g00591 734 PANTHER REPAIR PROTEIN RECA, PUTATIVE-RELATED 542 583 - -
Adu05g00591 734 MobiDBLite consensus disorder prediction 49 64 - -
Adu05g00591 734 Gene3D - 639 696 - -
Adu05g00591 734 MobiDBLite consensus disorder prediction 701 734 - -
Adu05g00591 734 Pfam recA bacterial DNA recombination protein 605 638 IPR013765 GO:0003697|GO:0005524|GO:0006281
Adu05g00591 734 SUPERFAMILY Bet v1-like 502 542 - -
Adu05g00591 734 MobiDBLite consensus disorder prediction 701 721 - -
Adu05g00591 734 SUPERFAMILY RecA protein, C-terminal domain 639 693 IPR023400 -
Adu05g00591 734 Pfam START domain 491 542 IPR002913 GO:0008289
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu05g00591 Adu-Chr5 6411932 6419869 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu05g00591 491 542 Homeobox Transcription Factor Family AT5G60690 86.538 9.08e-23 102
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu05g00591 K03553 - adu:107492975 373.629