Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu05g00590 ATGGATAAGCCATTAAAGATTTGTTTGAAAGCTACTGCTATTCAAGAGCTTCCAGATTCCTTTGTTGATCTTGTAGGACTTCTCTATTTAGATTTGACAAGTTGCGAGAAACTTGGTTATCTTCCAAGCAGCTTATTTATGCTGCCAAATTTTGTCACATTGAAAGTTGGAGGATGCCCTCAACTTGGTGGATCATTTGCAAGATTCAGAGAAAGCCTTTCAACTACTGCAGAGAGCCGTCCAAGTTTAAAAACTCTGCATTTCAGCCATGCAAGTTTACGTGACAAAGATCTTCAAGAAATTATGCAGAGTTTTCCAAACTTGGAAGTCTTAAATGTTTCATCAAACAACTTTGTGTCTATTCCAGCATGCGTTCAAGAATCGTCCTACTTGACAAGTTTGGATTTGAGTTACTGCCTAAATCTTCAAGAAATTCCGGAACTTCCCTCTAGTGTTAGGAAAGTGGATGTGAGACACTGCAGTTTCTTAAGTGCAAACACAACAAATATGCTATGGGCACAGTGGGTGCAAGTCTGTTTTAGACCAATAGCTTCAATGGGTTTGGACGAAACTGAACTTGCAATTGCAGTATACTTGTATGGTGATCATTTGATGGATAACTACCAGGAGGATATAGTATTTTCAGAGTTTACAGCTCACAGAGATGTATTCAGGAGCTTGATTCCAGGAAAGCCAATCGATTCTCTTGTGCTAGACTTAGTAGCAGATATGATGAGGATAGAGTTGACCAGAGAAAGTGGTTATTGGTTTTTACCCACAATTTTTGCGCTGGCAGAGAAGACAAAATTGGATCCCGACCGTCTGCCGCTTTATGTCACACATGTTTATTTGGGCAAAGTTGACTGTTTAAAAAGAGTGTTTATCCCTGTATCTGAAACTACTGACGAAGGCCATGAACACTGGTACCTCGTAGTGATTGATCGTGTTAAAAGACAAATAATTTTGCTAGACCCATTACCCATTAAGAAACAGTTCAAGCGAGAGAGGACAGCCTTGAAATTGGTGGATGATGGGGTTCGCATGAAGATTGCAGTCTCACTCGTGCTAAAGAATCATAATGTGATCAGAGATAGGGTCAAAGAAAATGCCATTGAAAATCTTAATAAGCTATATGATAATCACTATCCCCTCCGCCAGTCCGCCTCACCTCACTCACCCAGCCCCCAGCCCCCAGCCGCCCGCCGTCATCCTCTTCGTCTCACCGCCGGTCTGAACTCTGAAGGAACCGACTCAACCAAGGGAGTAGGAACAGGACAGATACAGACCCGCCACCCGCGAACTCGCCGTTGCCGCGAAGTCGCCGTTGCCGCGAACTCGCCGTTGCCGCGAACTCGCCGTTGCCGCGCAGTCGAACTCGCCGTTCCAGCGCCGTCGCCCTCGCCCTCGCCCAGTCGCCATTGCTTTTCCGATCGAACTCGCCGTTGCCTCGCCCTTCTACTCTGTGACTCTGTCAAACAGGTAAGCTCCAGTTCTGTAATCTGCTTCTGCTCTGTTCTGCACTTGAAGTTTAATGATTGTTCTGTCAAATGCATTACACCTGCTCTGTTCTGCATTGCACTTTTGGCATCACTTTTGGCGGTCCGGCAATACTCCGCTATAAGGATCGATTTAAAGAAGCTGTCTTCTTGGCTTTTGACTCACCATCCTGGAAGGTTAATGGGGCTGCTGATCATCTTCTACGATCCCTTCTTGGAAGTTAGTCAGGTCATGACAAAGAGCAAGGCAATGGGTATCCATATAATCAACGAAGTCACAGAGCAAATCATGACAGAAACCTTATATGGTGATAGTCGTAGGCTGCAGCAAGTCTTGGCTGACTTCTTATTGAGTTGCATCAATTTTACGCCAACCAGAGGTCAAGTTGTTGTTGCAGCCTCTTTAACGAAAGATCAATTAGGCAAATCAGTTCATTTGGCTTACTTGGAGATAAGCATAACACATGATGGTGTTGGTGTTCCGGAAACACTGCTGAACAAAATGTTCGGACGAGACGGACAAGAATCCGAGGAGGGTATTAGTCTGCTCATCAGCAGAAAGTTGCTGAAGCTCATGAATGGAGACGTGCGGTATCTGAGAGAAGCTGGCTAA 2109 0.4486 MDKPLKICLKATAIQELPDSFVDLVGLLYLDLTSCEKLGYLPSSLFMLPNFVTLKVGGCPQLGGSFARFRESLSTTAESRPSLKTLHFSHASLRDKDLQEIMQSFPNLEVLNVSSNNFVSIPACVQESSYLTSLDLSYCLNLQEIPELPSSVRKVDVRHCSFLSANTTNMLWAQWVQVCFRPIASMGLDETELAIAVYLYGDHLMDNYQEDIVFSEFTAHRDVFRSLIPGKPIDSLVLDLVADMMRIELTRESGYWFLPTIFALAEKTKLDPDRLPLYVTHVYLGKVDCLKRVFIPVSETTDEGHEHWYLVVIDRVKRQIILLDPLPIKKQFKRERTALKLVDDGVRMKIAVSLVLKNHNVIRDRVKENAIENLNKLYDNHYPLRQSASPHSPSPQPPAARRHPLRLTAGLNSEGTDSTKGVGTGQIQTRHPRTRRCREVAVAANSPLPRTRRCRAVELAVPAPSPSPSPSRHCFSDRTRRCLALLLCDSVKQVSSSSVICFCSVLHLKFNDCSVKCITPALFCIALLASLLAVRQYSAIRIDLKKLSSWLLTHHPGRLMGLLIIFYDPFLEVSQVMTKSKAMGIHIINEVTEQIMTETLYGDSRRLQQVLADFLLSCINFTPTRGQVVVAASLTKDQLGKSVHLAYLEISITHDGVGVPETLLNKMFGRDGQESEEGISLLISRKLLKLMNGDVRYLREAG 702
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu05g00590 702 MobiDBLite consensus disorder prediction 410 431 - -
Adu05g00590 702 Gene3D Ribonuclease Inhibitor 6 171 IPR032675 -
Adu05g00590 702 ProSiteProfiles Histidine kinase domain profile. 573 702 IPR005467 -
Adu05g00590 702 MobiDBLite consensus disorder prediction 383 402 - -
Adu05g00590 702 MobiDBLite consensus disorder prediction 411 430 - -
Adu05g00590 702 SMART HKATPase_4 602 702 IPR003594 -
Adu05g00590 702 SUPERFAMILY RNI-like 12 168 - -
Adu05g00590 702 PANTHER PHYTOCHROME A 565 702 - -
Adu05g00590 702 SUPERFAMILY Cysteine proteinases 215 331 IPR038765 -
Adu05g00590 702 PANTHER TWO-COMPONENT HISTIDINE KINASE 565 702 - -
Adu05g00590 702 Gene3D - 569 702 IPR036890 -
Adu05g00590 702 Gene3D Adenoviral Proteinase; Chain A 201 386 - -
Adu05g00590 702 Pfam Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 602 697 IPR003594 -
Adu05g00590 702 SUPERFAMILY ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 583 700 IPR036890 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu05g00590 Adu-Chr5 6404590 6411338 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu05g00590 574 702 Histidine Kinase Gene Family AT1G09570 65.116 3.00e-47 178
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu05g00590 K12120 - ahf:112771910 333.569