Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu05g00587 ATGGAAAGCTACCTAAAAGAGAATTTTGATGTGAAGCCTAAGAATTCATCTGAAGAAGCACTTGAGAGATGGAGGAAGCTATGTGGGATGGTCAAGAACCCCAAAAGAAGGTTCCGTTTCACTGCAAATCTCTCCAAGAGACAAGAAGCAGATGCCATGCGTCTTGGCAACAAGGAGAAGCTGAAGGTGGCAGTTTTGGTTTCCAAAGCAGCATTTCAATTTATCCAAGGTGCACAAGTGAAACCAAGTGATGAAAAAGTACCTGAAGAAGTTAAAGCAGCAGGTTTCGAAATCAGTGGTGATGAATTGGGGACTATTGTTGAAGGCCATGATGTGAAGAAGCTGAAATCTCATGGTGGGGTTGATGGCATTGCAGAGAAGCTTTCTACATCAACCAGCAAGGGGCTTAGCAGTGATCCTGATTCACTGAGCAAGAGACAAGACATATATGGGATCAACAAATTCGCCGAAAGCGAAGCCAAGAGTTTCTGGGTTTTTGTTTGGGAAGCCCTTCAAGACATGACTCTGATGATACTTGGAGTGTGTGCTTTTGTGTCTCTGATAGTTGGCATTGCAACAGAAGGTTGGCCAAAGGGAGCGCATGACGGTCTTGGCATTGTTGCCAGCATACTACTGGTTGTGTTTGTGACAGCAACCAGTGATTACAGGCAGTCATTGCAATTCAAAGATTTGGACAAGGAGAAGAAGAAGATTTCAGTTCAGGTAACAAGAGACGGTTGCAGGCAGAAGATGTCAATATATGAATTACTTGCTGGTGATATTGTGCATCTTTCAATTGGTGATCAAGTACCTGCTGATGGACTATTTCTCTCTGGATTCTCTGTGTTGATTGATGAATCAAGCTTGACAGGGGAGAGTGAACCGGTTATGGTGAACTCTGAGTATCCATTTCTTCTTTCTGGAACCAAGGTTCAAGATGGATCTTGCAAGATGTTGGTTACCACTGTGGGAATGAGGACTCAATGGGGAAAGTTGATGGCAACTCTGAGTGAAGGTGGAGATGATGAAACTCCATTACAGGTTAAATTGAATGGAGTTGCAACCATTATTGGCAAGATAGGCCTCTTCTTCGCCGTGGTTACATTCGCGGTTCTTGTGCAAGGACTAGTGAGCCGTAAGCTCCAAGAAGGGAGAATATGGAGCTGGAATGGAGATGATGCTTTGGAGATGCTGGAATTCTTCGCTGTCGCGGTTACCATAGTAGTTGTTGCTGTCCCAGAAGGGCTGCCACTGGCTGTGACATTGAGCCTTGCCTTCGCCATGAAGAAGATGATGAATGATAAGGCCCTTGTGAGGCATTTGGCCGCGTGCGAAACCATGGGATCTGCCACAACTATATGCAGTGACAAGACTGGAACTCTAACAACTAATCACATGACTGTTGTGAAAACATGCATTTGTATGAACACCAATGAAGTGAGTAACAATAAGGCTTCTGATTTGTGTTCTGAGCTTTCTGATTCTTCCATGAAACTGCTCCTTCAGTCAATATTCAACAACACTGGAGGAGAGGTTGTGGTTAACAAACATGGGAAGCGAGAGATCTTAGGGACACCAACAGAGACTGCAATCTTGGAGTTTGGCTTGTCACTTGGTGGAGATTTTCAAGCAGAGAAACAAGAATGCAATGTTGTTAAAGTTGAGCCTTTCAACTCCACCAAGAAGAAAATGAGCCTTGTGGTGGAGCTCCCTGGTGGTGGATTGCGTGCACACTGCAAAGGTGCTTCTGAGATCATCCTGGCCTCTTGTGACAAGGTGCTTAACTCTGCCGGCGAGGTTGTCCTGCTCAATGAAGAATCAAGTAACCATCTCAAGGCTACAATAGACCAGTTTGCTAATGAGGCACTCAGAACATTATGCCTTGCCTATAAAGAATTAGATAATGGATTCTCTTCCGAGGATCCAATTCCTGATTCTGGCTATACTTGTATAGGAATTGTTGGTATCAAGGATCCGGTTCGCCCTGGCGTTAAGGAATCTGTAGCAGTATGCCGCTCTGCTGGAATCACAGTGAGGATGGTTACAGGAGATAATATCAATACTGCCAAGGCTATAGCCAGGGAATGTGGGATCTTAACAGATGATGGCATAGCCATTGAAGGTCCAGAGTTTAGAGAGAAGAGTGAGGAAGAATTGCTTAAACTCATTCCCAAAATTCAGGTTATGGCTCGGTCGTCGCCTTTAGACAAACATACATTGGTGAAACACTTGCGTAACACGTTTGGGGAAGTTGTAGCTGTAACTGGAGATGGAACAAATGATGCTCCAGCACTTCATGAAGCTGACATTGGACTTGCTATGGGCATTGCTGGAACTGAGGTTGCAAAAGAAAGTGCTGATGTCATAATTCTAGATGACAACTTCTCCACAATAGTGACAGTGGCCAAATGGGGACGTTCTGTTTACATAAATATTCAAAAATTCGTGCAGTTTCAGTTAACGGTTAATGTGGTTGCATTGATAGTGAACTTCACCTCAGCATGTGTGACAGGAAGTGCACCCCTCACAGCTGTTCAACTTTTGTGGGTGAACATGATCATGGATACACTGGGAGCACTAGCACTAGCAACCGAACCTCCGAATGATGATTTAATGAAGCGTTTGCCTGTTGGAAGAAAGGGCAATTTCATCAGCAATGTCATGTGGAGGAACATCTTGGGACAATCATTGTATCAGTTTATGGTGATATGGTTTCTTCAGTCAAGGGGAAAATCGATATTTTCGCTCGACGGCCCTAACTCGGATCTGGTCTTAAACACACTCATTTTCAACACATTTGTCTTCTGTCAGGTTTTCAATGAGATTAACTCACGTGAGATGGAGGAAATAGATGTTTTCAAAGGCATATTAAACAATCATGTTTTCGTGGGTGTCCTTACTGCTACTGTTTTCTTCCAAATCATAATAGTGGAGTACTTGGGAACCTTTGCAAACACAACACCTCTAACTCTGGTTCAATGGTTCTTCAGCTTGTTGGTTGGATTTTTAGGCATGCCAATCGCAGCTCGCTTGAAGAAGATCCGTGTTTGA 3051 0.4389 MESYLKENFDVKPKNSSEEALERWRKLCGMVKNPKRRFRFTANLSKRQEADAMRLGNKEKLKVAVLVSKAAFQFIQGAQVKPSDEKVPEEVKAAGFEISGDELGTIVEGHDVKKLKSHGGVDGIAEKLSTSTSKGLSSDPDSLSKRQDIYGINKFAESEAKSFWVFVWEALQDMTLMILGVCAFVSLIVGIATEGWPKGAHDGLGIVASILLVVFVTATSDYRQSLQFKDLDKEKKKISVQVTRDGCRQKMSIYELLAGDIVHLSIGDQVPADGLFLSGFSVLIDESSLTGESEPVMVNSEYPFLLSGTKVQDGSCKMLVTTVGMRTQWGKLMATLSEGGDDETPLQVKLNGVATIIGKIGLFFAVVTFAVLVQGLVSRKLQEGRIWSWNGDDALEMLEFFAVAVTIVVVAVPEGLPLAVTLSLAFAMKKMMNDKALVRHLAACETMGSATTICSDKTGTLTTNHMTVVKTCICMNTNEVSNNKASDLCSELSDSSMKLLLQSIFNNTGGEVVVNKHGKREILGTPTETAILEFGLSLGGDFQAEKQECNVVKVEPFNSTKKKMSLVVELPGGGLRAHCKGASEIILASCDKVLNSAGEVVLLNEESSNHLKATIDQFANEALRTLCLAYKELDNGFSSEDPIPDSGYTCIGIVGIKDPVRPGVKESVAVCRSAGITVRMVTGDNINTAKAIARECGILTDDGIAIEGPEFREKSEEELLKLIPKIQVMARSSPLDKHTLVKHLRNTFGEVVAVTGDGTNDAPALHEADIGLAMGIAGTEVAKESADVIILDDNFSTIVTVAKWGRSVYINIQKFVQFQLTVNVVALIVNFTSACVTGSAPLTAVQLLWVNMIMDTLGALALATEPPNDDLMKRLPVGRKGNFISNVMWRNILGQSLYQFMVIWFLQSRGKSIFSLDGPNSDLVLNTLIFNTFVFCQVFNEINSREMEEIDVFKGILNNHVFVGVLTATVFFQIIIVEYLGTFANTTPLTLVQWFFSLLVGFLGMPIAARLKKIRV 1016
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu05g00587 1016 PANTHER CALCIUM-TRANSPORTING ATPASE 9 1014 - -
Adu05g00587 1016 PRINTS H+-transporting ATPase (proton pump) signature 787 812 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Adu05g00587 1016 PRINTS H+-transporting ATPase (proton pump) signature 611 629 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Adu05g00587 1016 PRINTS H+-transporting ATPase (proton pump) signature 755 771 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Adu05g00587 1016 PANTHER CATION TRANSPORTING ATPASE 9 1014 - -
Adu05g00587 1016 SFLD p-type atpase 436 807 IPR044492 -
Adu05g00587 1016 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 460 664 IPR023299 GO:0000166
Adu05g00587 1016 Pfam Cation transporter/ATPase, N-terminus 118 186 IPR004014 -
Adu05g00587 1016 ProSitePatterns E1-E2 ATPases phosphorylation site. 456 462 IPR018303 -
Adu05g00587 1016 SUPERFAMILY Calcium ATPase, transmembrane domain M 118 1014 IPR023298 -
Adu05g00587 1016 SMART Cation_ATPase_N_a_2 117 191 IPR004014 -
Adu05g00587 1016 PRINTS P-type cation-transporting ATPase superfamily signature 674 684 - -
Adu05g00587 1016 PRINTS P-type cation-transporting ATPase superfamily signature 454 468 - -
Adu05g00587 1016 PRINTS P-type cation-transporting ATPase superfamily signature 755 774 - -
Adu05g00587 1016 PRINTS P-type cation-transporting ATPase superfamily signature 285 299 - -
Adu05g00587 1016 PRINTS P-type cation-transporting ATPase superfamily signature 779 791 - -
Adu05g00587 1016 PRINTS P-type cation-transporting ATPase superfamily signature 652 663 - -
Adu05g00587 1016 Gene3D - 464 659 IPR023299 GO:0000166
Adu05g00587 1016 Gene3D - 451 800 IPR023214 -
Adu05g00587 1016 Pfam Cation transport ATPase (P-type) 515 593 - -
Adu05g00587 1016 Pfam Cation transporting ATPase, C-terminus 840 1013 IPR006068 -
Adu05g00587 1016 Gene3D - 140 337 - -
Adu05g00587 1016 Pfam E1-E2 ATPase 237 432 - -
Adu05g00587 1016 CDD P-type_ATPase_Ca_PMCA-like 143 888 - -
Adu05g00587 1016 SUPERFAMILY HAD-like 452 860 IPR036412 -
Adu05g00587 1016 Pfam Ca2+-ATPase N terminal autoinhibitory domain 5 49 IPR024750 GO:0005516
Adu05g00587 1016 Gene3D - 169 1005 - -
Adu05g00587 1016 Gene3D - 16 76 - -
Adu05g00587 1016 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 394 476 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Adu05g00587 1016 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 725 842 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Adu05g00587 1016 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 551 700 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Adu05g00587 1016 SFLD Haloacid Dehalogenase 436 807 - -
Adu05g00587 1016 SUPERFAMILY Calcium ATPase, transduction domain A 239 334 IPR008250 -
Adu05g00587 1016 TIGRFAM ATPase-IIB_Ca: calcium-translocating P-type ATPase, PMCA-type 110 1014 IPR006408 GO:0005388|GO:0005524|GO:0016020|GO:0070588
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu05g00587 Adu-Chr5 6391784 6395408 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu05g00587 1 1016 Primary Pumps ATPases AT4G37640 82.006 0.0 1708
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu05g00587 K01537 - gmx:547567 1743.4
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu05g00587 05 6391784 6395408 Adu05g00587 05 6391784 6395408 ECH
Adu05g00587 05 6391784 6395408 Adu01g01119 01 19484661 19491307 PCT