Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu05g00566 ATGCCGATGTTTCAGCCTTCCAAGAGGGACATGGTAGGTGGGTACGAGGGTGGAGGGGACGGGCAGATTCTAGATCTGGACACTGCCGTGAAGGACGGTGTGTTGGGGGGAGGCGTTGGCGTTGGCGTTGGCGTTGGCGTTGTGGGAGGCATGGCATGCGAGAAATTGGATCTGGGGAAGATGATTGAGGAGCTGGACTTGTCGGAGGTACCAAGCGTGTTCATATGCCCAATCTCTCTGGAAGCAATGCAAGACCCCGTGACACTCTGCACCGGACAAACTTACGAGCGGTCCAACATCCTCAAATGGTTCAACCTGGGTCACTTGACCTGCCCCACTACGATGCAGGAGCTTTGGGATGATTCCGTTACCCCCAACACCACCCTCTACCGCCTCATATACACGTGGTTCTCTCAGAAGTACCTTCTCATGAAGAAGAGGTCGGAGGATGTTCAGGGTAGGGCTTCCGAGCTTCTTGACACGCTCAAGAAGGTCAAGGGTCAGGCTCGAGTCATGGCTCTCAAGGAGCTTCACCAGGTTGTTGCTGCTCACGCCACTGCCCGCAAGACGCTTCTCGATGAAGGTGGTGTCTCTTTAATGTCTTCTTTGCTTGGACCTTTTACTTCCCATGCTGTTGGCTCTGAGGTTATTGGTATTCTTGTTTGCTTGACTCTTGATTCCGATTCCAAGAAGAATCTTATGCAGCCTGCCAAGGTTTCTTTGATGGTGGATATCCTCAACGAGGGCTCTATCGAGACCAAGATTAATTGTACTAGGTTGATTGAGTCTTTGATTGACGATAAGGATCTTAGGTCCGAGCTTATCTCCAGCCATAGCTTGTTGGTTGGCTTGATGAGGCTTGTAAAGGATAAGAGGCACACCAATGGAATCTGCCCTGGCTTGAGCCTTTTAAGAGCAATTTGCTCCCACAAAGACATTCGGCATTTGCTTGTAAGCATCGGTGCTGTTTCGCAATTGGTCGAATTGTTGTCTGCTTTGGAGCCTGATTGTTTGGAATTGGCACTTTCTATTTTGGATTCCTTGGCATCTATACCCGAAGGCAGGCTCGCTTTGAAGAATTGTTCTAATACCATACCAATCATGGTCAAATTGTTGATGAGGATCTCGGAGAATTGCACGCAGTATGCGTTGTCCATCTTGTGGTCTGTCTGCAAGCTTGCACCGGAGGAGTGCTCGTCCGTTGCCGTGGACGCAGGGCTTGCTGCCAAACTCCTCCTTGTGATTCAGAGTGGTTGCAATCCTCTATTGAAACAACAGTCTGCTGAGCTTTTGAAGCTGTGCAGTTTGAATTATTCGGATACAATCTTTATTTCCAAGTGCAAGCTTACAAGAACCATCCTATAA 1365 0.493 MPMFQPSKRDMVGGYEGGGDGQILDLDTAVKDGVLGGGVGVGVGVGVVGGMACEKLDLGKMIEELDLSEVPSVFICPISLEAMQDPVTLCTGQTYERSNILKWFNLGHLTCPTTMQELWDDSVTPNTTLYRLIYTWFSQKYLLMKKRSEDVQGRASELLDTLKKVKGQARVMALKELHQVVAAHATARKTLLDEGGVSLMSSLLGPFTSHAVGSEVIGILVCLTLDSDSKKNLMQPAKVSLMVDILNEGSIETKINCTRLIESLIDDKDLRSELISSHSLLVGLMRLVKDKRHTNGICPGLSLLRAICSHKDIRHLLVSIGAVSQLVELLSALEPDCLELALSILDSLASIPEGRLALKNCSNTIPIMVKLLMRISENCTQYALSILWSVCKLAPEECSSVAVDAGLAAKLLLVIQSGCNPLLKQQSAELLKLCSLNYSDTIFISKCKLTRTIL 454
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu05g00566 454 SUPERFAMILY ARM repeat 158 439 IPR016024 -
Adu05g00566 454 Gene3D - 148 300 IPR011989 -
Adu05g00566 454 PANTHER WDSAM1 PROTEIN 44 451 IPR045185 GO:0061630
Adu05g00566 454 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 69 144 IPR013083 -
Adu05g00566 454 SMART Ubox_2 73 136 IPR003613 GO:0004842|GO:0016567
Adu05g00566 454 Pfam U-box domain 70 140 IPR003613 GO:0004842|GO:0016567
Adu05g00566 454 Gene3D - 301 435 IPR011989 -
Adu05g00566 454 PANTHER U-BOX DOMAIN-CONTAINING PROTEIN 30 44 451 - -
Adu05g00566 454 SUPERFAMILY RING/U-box 64 140 - -
Adu05g00566 454 ProSiteProfiles U-box domain profile. 69 143 IPR003613 GO:0004842|GO:0016567
Adu05g00566 454 CDD RING-Ubox_PUB 74 116 IPR045210 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu05g00566 Adu-Chr5 6227060 6228424 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu05g00566 1 453 U-box Gene Family AT3G49810 73.731 0.0 667
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu05g00566 - - adu:107487639 853.203