Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu05g00548 ATGAGAACCCTCTGCAACGTATGCGAAAACGCCGCTGCAATTTTATTCTGCGCCGCCGACGAAGCTGCTCTTTGCCGCTCTTGCGATGACAAGACAAAGAGCAGCGTGATCGGAACAAATGAGCGAAGGAATTTTAGTTTTGGAATGAAAGCTAAGGGCGTGGCTTCTGTAAGCTCATCAACAATCTTGCAGAAGCTAGATTCCAAGGATTTCATAGGCTTCCGATCACTGTTTCTTGAATACGTTAATGATCTCAACGAATTTTCCATGTCAAAAAACCAAAGGGAAGTACAATCGATCGCTGAGAAGTTTTATCCGTTTCTAATGGATTCCTTTGGAATTCTTCACAAACACTTGGAGAACATCTTCAAATCCAGCAAAGACAAGGAGATCCTCGCGGAACTGGTGAAGGTATACAAAATGTGCTTGGATTGCTTCGACAAAGTGGCCCCTGCGATGCAGCAACGCAAGCCGTATGTAGCGGAGTTTGAGAGACTAAATTTTATCAAGTATCTCGAGAAGTTCGGTTACATATCAGAAGCGGAAACCGAGTCTATAAGCTTGTCCAAGACGCTTCAAGACTCGAGTAAACCGACAGAGAGGAAGAGTAGGAAGCGTATACGTGCTGATCAGGATAAATGTTTGGGTTCTTTAATAGTTCAAAATGCTGTATTAATGGTGAGTTTGACGGCGGCATTGGGAGCCGATGACAATGACGATGTCGGTGATAGCCGCTTCAGGTCTTTGCTTTGTTTGTTGGAAGAAATGAGGCCGTGGCTAAGGAAAATAGATACAACTGAGAATTTGCGCATCAAGTTGGTGGATGATTTGTCTCGTAACGCCTTCAAATTGTTGAGAAGAACAAATTCTGACGAAGATTTGATAATTTCCTTCTGCCGTGTGACACTTACTGAGTATGTCAAATCTCCAAGAAAAGATAAAGTCTACGAGATTGCCCAAAGCATGTGCTCCTTACTGTTTGAACTGCATAAGAATAAACCGAATTATATTGCTAATGTACTGGATGTTATCCTGGATTGTGTTCTTTCTGAGTGCCAGCTTGGAGAGGGAAATGCTGGAACAAGGTTTATTGAAACTGTATATTTTTGTGTACGGAGTGCTACAGAAGCATGTACTCGTCGTACAGTTGCAGTATGTCTGAACAGAATAGCTGAACATTTTAAACAGGTTAATCCACTCATTTTTTCAATATTGAGGCTTTATGCCACTGGGTTGCTCCTTGATGATTCTACCTCTCAGTCCAGAATTGGAGATCCTGCATCCACCAGAAGTTTGAAGTTTGACTGTCAACTTGGAAACTTACTTAAACAACAGAACGTGCTGCAGACTTCCTTAGATTCGCTTTGTTCTGTCGCTGAGGCTTCACTGACTTACCTTCCATTTTGTTCCCACCCATTGAGATTCTTATGTTTACCTCTTGCTAATTCAATTGATGAAGAAATGTCTCAGTTTGTTAATAAAGTGGTGGATGCTTCTGTTGAAAAACTTATGTCCACAGTGCAAGATCAATTCCATATCCTTTGCAATAGTATTCTATCTAGTCCAAGCTTTACATCTGAAAAAAACACCAACGAATTTGCAGAGAAATGTCAAACAGTGATTAGTGTAGCTTTAGCAGCCTACACTATTTCAATCAGAACAAATCTTAAAGTCCAGGAGAGCAGTAAGTTAGTTAAGCAAATCATAGCCAGCAAATGGCTAACATATGAAAGCATTTCAAAGATATGTGGTTGTCTCAACGAAATTTTTGTCATTTTGTTCGCAGACAAGCATAAAAAGGCTTTAAAGGTTCTAAACCTGTATTGTACAGCATCATGGATCACGATTGAATATCACTGTTCGAAGCTAACCAGTGGGGCATTGAAAGAGTTGGTAAATAACTCTTGCAAAAGAAGCACTGAACTTTTAGATGCTCCTTATGACATCAATCCTAGAAAGATAAGAAAAAGACTGATTGAGATCCTTAAAAGCTGGTACACTGCCAACAGTCTATCTAAGGATTTGCCACCTCCTATGTTTGTAATGAAGTGGCTGATGAAGGAACATGCTAAGCATATAAAAGAGGGAGTGGATTCATGTTCTACCGAATTCTCCAACAAGAACGTTAGCTTCATCCTGGAGCAGGAACTTATATCATATGAGGCAGAGAGTCTAGAACACCCAAAACATTCTCAGAAAATGCTGATGAAAATTACGAAGATCCTCCTGCAATACATATATATCACTGACGATTTGAAAAGAGCCCAGGCCCTACTAAGAAGGGGAAAAGCATTAAGGATTTGTACCACTGCTAGTCATGATGACTGCATTCAGTGTCTCACCGATGCAATAACTATCATGAAGAATTATGGTGAAATGAGTGCCAACAAAAACGTTATTGATCATCAGTTGGCTGTGGCCTATTGCCTACGTGCTTTATCTACCCAGGAAGCTGAACCAAAATCGGTGCGAATCTCTGAAGATGTTGAGAGTGCATTGGATCTGTGGTTGGACATTTCTCGTTTTGATTTCCCTGAGGACAGAGAGCGTTCTCAACCGTTTGATAGTATTATGGTTCTGCTCTACAACACAATTGATTTAGTTCAACTCAAGGGTTTCTTGAAACTCTCCAAGAAAGCATATCAGATGGTGATTAGAATCTTTAAACGGAAGTTCTCAACTGAGAAGTGGTTGACCTTACTATGGGAAAGTAGAAGGCTAAGACATGCCCTTTGCGCTTCCCCGATCAGTGATGCATTTATCCAGTCTTCACTAGACTTAGTTAATGAACTTTCAAAAGTTGACATCTGGACAAGTCACCTTCGAGAAAATCCTATACAATTAATAGGTTTTCAGCAGAATTTCTCATTTTTGTTTGCTAGTTCAGATACAGATTCTTCCTGTTATGAAGCCTGTTTTCAAAGAAAGATAACAATTGATGATGTTAAAAGCGCCGCAGAGAAACTTTCAAATGATTCTGTTCCACTTCATTCTACTTTTCTTCGCGGGAGTCTGTATTATGATTTATGCTCATGGCTCGTTGCAAATGGACAATTAAGAGAGGCTCTTTCATTAGCTAAAGAAGCCCGAAACTTATATGTTGGACTCTGCAAAGAGAAATTTGGGGACAACTTCAAGAAAAATAGAGTGAATGAATCAGTTGCCAGGAAGATTGCACAATTTGATATAGAACTGTGGGACTTCAGCCAATGTTATTTTAGTCCATGGAATAGTATGCAATGTTATCTTGAGAGTACTCTTCAGGTAGGACTTATCTGCAAAATTAGTGGAGATGCAGAGTTGGCCAAAGCTTATTTCCTGGACGGGAAAGACACGTCTTACTCGTTACATTTGCCTTCTTTCATCGTTGCATTTTGCTCCGAACTAGGAAAAATTTATATTGAGAAAAGAGACTGGAATTCTGCAGAAAAGGAACTTCAAAATGCCAAGCAGATTTTAAGGGATAGCAATACAACTTTATGCTGTTCTAAGTGTAAATTAATCTTTGAAGTGACACTTGATCAGTATTATGGAGATTTGCATCAAAGTAAATATAAGACCTGTGAAGTGAAGAGTTTTAGTTCCGAGCATATATCTTTTTACGAATCAGCTCTGGCTAAATTAGATCTTCCTGAGTGGAAAAATTCTGTCAGCTGTCCTGAAGATGGTAGTCTCAAAACAGCAGCGGTAGATGTCATCTCTGCAGGGACTTCTTGTATTTGCTTTACAATGAACGAAGCAGCTCAAAATGTAATAATGGAACCCACGAAAGAAGGTAGCTGGCATTGGCACTGTATTGCAACCGAAGTTTTAGAAGGCAGACTTCTTAGCGATTTTATAAACTTTAAATGGGAGTTTGTCCGGAGGAAACTTTCGATGAAGCTGCTCGCTCGATTAGTGAGATGCTTTGCATATGTTGGAGATGAGACACAGAAAATTCTTTTGAAGAGTACGACAATGCTTCACAGTAAAAACACATTCAGTGAAACAAATTCAGCGATTGCCATAGATTATTTTCAACATATAGTCCCAAAGGTGATCCTGGGAGACATGTTTGCGGTTGAACGTGCGGAGATACTCAAAGAAATATGTTTGTACTATTGGAATATCTATAATTCCAAGGCTACAACTACAAGGAATATTTTTCAGAATGAATCTTGCATTAGCCTTAAAGATCTAGCTTCTTGGCTGATGGTGGCATTTGTACTCTCCCGTGAGGTTCCCGATATTTTTCATAAGGTGTCTCAGTTACTTGCTGTGACATATGTTGTTTCTGACTCGAGAGAGCAACTTTCTCTGCCATATATTAGCAAAAGTTTGGGTGAAAATGCTTGGGCTTCGTATTTCCACCAAGCGTCCATTGGAACTCATGATACTCACTCATCTCGTCTAACTGGAAGATGCAAGGGTTCAGATAAATCCAACATAGGAGGGACATACAACTTATCCAGGCTTGTGCCTGATGACACTGAAGTTCTTGCAGAATGTGTAAAACAGTTTTTGGGTGATCTTCCATCTACAACAGTCATCTGCCTGACTTTACTTGGACATGATTATGCTAGTTTACTCAAGGAATTTTCCCCTAGTGTTAAAGCATGGATACTGTTGTCCAGACTCACTTTTGAGAGTGAACCTATAGTAGCATTATTGCCTTTGCATCCTATTTCAGAAGATGTAATTGATCCGCCAATACTTCCCAAGTATAAAATTTTAAGAGATTGGTGGTGTCCATGGGGTTCGACAGCCTTAGATGAAGTAGTTCCAGCATTCAAAAATATTTTAAAAGAGGATTATTCGCGAGAATTGGAAGAAAATACATCTGAACAGCAGCAGCTGTGGTGGAACCATAGGAAAACGCTTAATCAACGTCTTCGTCAGTTGCTAAGGAGCATTGAAGAATCGTGGTTTGGATCATGGAAATGCTTGCTTCTTGGAGAATTGTTAAATTGCAAGAATTTTGAGTCTCTGCTTGAGCATCTTGTGAAGGAGTTAAGATCTGAATGTAAATTGGAAGTTAACGAGGGCCTCGTTAGAGTTATTCTTGGAGGAACCAGACATGTTTGTGGACGAGAAAAGCTAAAGTGCAAGAAAGACTGCTATATTGCTAAAGTAGGCCATTGTGATCAAGGAATGAGTGGGATATTATTAAATGCCGCCGATGGTTTTGGGGTGTCATCTGATAAAGCTTTTCAACTGTTGAAGCATGCGTTGATTGAGCTGGACGCAGATAAGAATAGTAAAAGAGAGCCAATTATTCTTGTGTTAGATTATGAGGTGCAGATGCTTCCGTGGGAAAACATTCCCATACTTAGACAACTTGAAGTATACCGGATGCCTTCTGTCAGCAGCATCTCTGCCTTGGGTGATACAGGAAGCAGATCCCAAAAGGAAGCTGGAAGAAAATGTCCCTCATTTCCCTCAATAGATCCTCTGCACGCCTTCTATATACTAAATCCAGATGGAACCGTCCCTGAATGTCAAAATGAATTTGAGAATTGGTTTAAAGAGAACAATTTGAAGGGGAACACAGGTTTGGCACCAACCCGAAAATTATGGGCTTCTGCATTGGAGAAGCACGACCTTTTTATATACATCGGGCATGGAAGTGGAACAAAGTACTTTAGCTTGGAAAATTTTCAGCATCTAAATAAATGTGGTGCTGTGGTGTTGTTAGGGTGCAACAGCGGTACCGTTTACTTGCAGGGTAACTGTGCACCGCTATGTATTCCCCTGCAATATCTTGCAGCCGGTTCTCCGGCTATTGTTGCTAATTTGTGGAAAATATCAGCAAAAGATATCAGTACATTTGGTAAATACTTGCTCCAGGCGTGGGTCAAGAAAAGATTTGAACTTGAAAAAGAATGCCCTAACAACTGTGATCACCCACCAACACTTGGAGCTTTCATAGGTCGTGCACGGGATGCTTGCGAACAAGAATTTATGACAGGTGCAGCACCTGTATGCTACGGTGTTCCTACTCGGATTTGTGTGAAGAAGAGAGTTTCGTCCATGGCCACTTGA 6021 0.4031 MRTLCNVCENAAAILFCAADEAALCRSCDDKTKSSVIGTNERRNFSFGMKAKGVASVSSSTILQKLDSKDFIGFRSLFLEYVNDLNEFSMSKNQREVQSIAEKFYPFLMDSFGILHKHLENIFKSSKDKEILAELVKVYKMCLDCFDKVAPAMQQRKPYVAEFERLNFIKYLEKFGYISEAETESISLSKTLQDSSKPTERKSRKRIRADQDKCLGSLIVQNAVLMVSLTAALGADDNDDVGDSRFRSLLCLLEEMRPWLRKIDTTENLRIKLVDDLSRNAFKLLRRTNSDEDLIISFCRVTLTEYVKSPRKDKVYEIAQSMCSLLFELHKNKPNYIANVLDVILDCVLSECQLGEGNAGTRFIETVYFCVRSATEACTRRTVAVCLNRIAEHFKQVNPLIFSILRLYATGLLLDDSTSQSRIGDPASTRSLKFDCQLGNLLKQQNVLQTSLDSLCSVAEASLTYLPFCSHPLRFLCLPLANSIDEEMSQFVNKVVDASVEKLMSTVQDQFHILCNSILSSPSFTSEKNTNEFAEKCQTVISVALAAYTISIRTNLKVQESSKLVKQIIASKWLTYESISKICGCLNEIFVILFADKHKKALKVLNLYCTASWITIEYHCSKLTSGALKELVNNSCKRSTELLDAPYDINPRKIRKRLIEILKSWYTANSLSKDLPPPMFVMKWLMKEHAKHIKEGVDSCSTEFSNKNVSFILEQELISYEAESLEHPKHSQKMLMKITKILLQYIYITDDLKRAQALLRRGKALRICTTASHDDCIQCLTDAITIMKNYGEMSANKNVIDHQLAVAYCLRALSTQEAEPKSVRISEDVESALDLWLDISRFDFPEDRERSQPFDSIMVLLYNTIDLVQLKGFLKLSKKAYQMVIRIFKRKFSTEKWLTLLWESRRLRHALCASPISDAFIQSSLDLVNELSKVDIWTSHLRENPIQLIGFQQNFSFLFASSDTDSSCYEACFQRKITIDDVKSAAEKLSNDSVPLHSTFLRGSLYYDLCSWLVANGQLREALSLAKEARNLYVGLCKEKFGDNFKKNRVNESVARKIAQFDIELWDFSQCYFSPWNSMQCYLESTLQVGLICKISGDAELAKAYFLDGKDTSYSLHLPSFIVAFCSELGKIYIEKRDWNSAEKELQNAKQILRDSNTTLCCSKCKLIFEVTLDQYYGDLHQSKYKTCEVKSFSSEHISFYESALAKLDLPEWKNSVSCPEDGSLKTAAVDVISAGTSCICFTMNEAAQNVIMEPTKEGSWHWHCIATEVLEGRLLSDFINFKWEFVRRKLSMKLLARLVRCFAYVGDETQKILLKSTTMLHSKNTFSETNSAIAIDYFQHIVPKVILGDMFAVERAEILKEICLYYWNIYNSKATTTRNIFQNESCISLKDLASWLMVAFVLSREVPDIFHKVSQLLAVTYVVSDSREQLSLPYISKSLGENAWASYFHQASIGTHDTHSSRLTGRCKGSDKSNIGGTYNLSRLVPDDTEVLAECVKQFLGDLPSTTVICLTLLGHDYASLLKEFSPSVKAWILLSRLTFESEPIVALLPLHPISEDVIDPPILPKYKILRDWWCPWGSTALDEVVPAFKNILKEDYSRELEENTSEQQQLWWNHRKTLNQRLRQLLRSIEESWFGSWKCLLLGELLNCKNFESLLEHLVKELRSECKLEVNEGLVRVILGGTRHVCGREKLKCKKDCYIAKVGHCDQGMSGILLNAADGFGVSSDKAFQLLKHALIELDADKNSKREPIILVLDYEVQMLPWENIPILRQLEVYRMPSVSSISALGDTGSRSQKEAGRKCPSFPSIDPLHAFYILNPDGTVPECQNEFENWFKENNLKGNTGLAPTRKLWASALEKHDLFIYIGHGSGTKYFSLENFQHLNKCGAVVLLGCNSGTVYLQGNCAPLCIPLQYLAAGSPAIVANLWKISAKDISTFGKYLLQAWVKKRFELEKECPNNCDHPPTLGAFIGRARDACEQEFMTGAAPVCYGVPTRICVKKRVSSMAT 2006
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu05g00548 2006 CDD Bbox1_BBX-like 4 31 - -
Adu05g00548 2006 ProSiteProfiles SEPARIN core domain profile. 1810 1904 IPR030397 GO:0004197|GO:0006508
Adu05g00548 2006 ProSiteProfiles Zinc finger B-box type profile. 1 28 IPR000315 GO:0008270
Adu05g00548 2006 Pfam Peptidase family C50 1531 1933 - -
Adu05g00548 2006 PANTHER EXTRA SPINDLE POLES 1-RELATED 95 1218 IPR005314 GO:0004197|GO:0005634|GO:0006508
Adu05g00548 2006 PANTHER EXTRA SPINDLE POLES 1-RELATED 1264 1999 IPR005314 GO:0004197|GO:0005634|GO:0006508
Adu05g00548 2006 PANTHER BNAC04G05300D PROTEIN 95 1218 - -
Adu05g00548 2006 PANTHER BNAC04G05300D PROTEIN 1264 1999 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu05g00548 Adu-Chr5 5887090 5900326 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu05g00548 1 31 C2C2-CO-like Transcription Factor Family AT4G38960 80.645 5.63e-11 62.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu05g00548 K02365 - adu:107487547 1948.71