Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu05g00530 ATGGAGGAATTAAACGGATTGGCAACCAACTGGTTATCTGATCTGGATATAGATGATTACGAATTGTTTTCAGAGTGCAATTTGAAGAAGTTTCTGGATGAGGATGAAGAGAATCAGTTTGATGAGATGGTGATGAGTGCAGTGGTGGGGGAGGAGGAGGAAGAGGAGGAGGAGAGGCCAACTAAGCAACTCAGAACTTGCTCATCATCAAGCATCACTAACTACGTCTCATCTAATTCTTCTTCTTCTTCTTCTCCCACCTCCCAGATTCTGTCTTTTGAAAACTCTTACAACCCATCCTCCCAATTTTATGGCTTTGAATTTGATGCAACTCCTAATGATAAGGTTTCACCGCAACCACAAGTTGGTAATAACAATGATAAGAACAAGCTGGAACAAACAAGGAAACCTCAAAGCCAAGGGAGTAAGAGACAGGCGGCTCACTCTCACGATCACATCATGGCTGAGAGAAAGCGAAGGGAGAAGCTCAGCCAAAGCTTGATCGCCCTTGCAGCTCTTATTCCAGGCTTAAAAAAGATGGATAAGGCTTCGGTACTGGGAGATGCAATCAAGTACGTGAAAGAGCTTCAGGGGCGATTGAAGGTTCTAGAAGAAGAGAACAAGAGAGAGGTGGAGTCTGTGGTGATTGTGAAGAATCCACGCTTCATCACGAGCAGCAGCGACGATGACTCCTCGTCCTGTGATGATGACACCTTGGAAGCAGACGGCGAAGCAGCACTAGCACACGTGGAAGCAAGAGTGGCGGCGGCCGAGAAGGAGGTGCTGCTCCGGATCCATTGCAAGAAACAGAAGGGCATTTACGTCAAATTACTGTCGGAGATACAAAGCCTTCACCTGTACGTGGTCCATAGCAGTGTGCTACCGTTCGGGGATTCGGTTCTCGACATAACCATCGTCGCTCAGGTTTACACTTTAATTAATTGTTCAATATGA 954 0.4633 MEELNGLATNWLSDLDIDDYELFSECNLKKFLDEDEENQFDEMVMSAVVGEEEEEEEERPTKQLRTCSSSSITNYVSSNSSSSSSPTSQILSFENSYNPSSQFYGFEFDATPNDKVSPQPQVGNNNDKNKLEQTRKPQSQGSKRQAAHSHDHIMAERKRREKLSQSLIALAALIPGLKKMDKASVLGDAIKYVKELQGRLKVLEEENKREVESVVIVKNPRFITSSSDDDSSSCDDDTLEADGEAALAHVEARVAAAEKEVLLRIHCKKQKGIYVKLLSEIQSLHLYVVHSSVLPFGDSVLDITIVAQVYTLINCSI 317
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu05g00530 317 MobiDBLite consensus disorder prediction 145 159 - -
Adu05g00530 317 SMART finulus 153 202 IPR011598 GO:0046983
Adu05g00530 317 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 147 196 IPR011598 GO:0046983
Adu05g00530 317 Coils Coil 186 213 - -
Adu05g00530 317 MobiDBLite consensus disorder prediction 108 159 - -
Adu05g00530 317 MobiDBLite consensus disorder prediction 49 91 - -
Adu05g00530 317 Gene3D - 128 212 IPR036638 GO:0046983
Adu05g00530 317 PANTHER TRANSCRIPTION FACTOR NAI1 32 309 - -
Adu05g00530 317 PANTHER BHLH TRANSCRIPTION FACTOR 32 309 - -
Adu05g00530 317 MobiDBLite consensus disorder prediction 64 91 - -
Adu05g00530 317 MobiDBLite consensus disorder prediction 114 128 - -
Adu05g00530 317 Pfam Helix-loop-helix DNA-binding domain 152 197 IPR011598 GO:0046983
Adu05g00530 317 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 152 210 IPR036638 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu05g00530 Adu-Chr5 5631855 5633907 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu05g00530 7 308 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G37850 36.760 1.82e-48 163
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Adu05g00530 HLH 2.7e-09 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu05g00530 - - adu:107487595 532.717