Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu05g00513 ATGGGAAGAACCTCCTCACTCTGCAACCTCTTCTCTTGCTTCGCACCACCCTCCACCAACGACCACCACCAACAACCACCCGAGCTCGCATTCCAAGAAACCGAACCGCTAGACGAAACCCTAGGTCACTCATTCTGCTACGTCAGATCCTCAAATCGCTTCGTCTCTTCTCCCACTCACTCACCCTCTCATTCCGATCGCTTCCTCTCTTCCCCTTCCGCCTCCCTCCGCTTCTCCCCAACCCACACCGAACCCGTTTTCAAGTCCATTTCCGGTGCCTCCGTTAGCGCCAACAGCTCCGCTCCCAAAACCGTTCTCCAATTTGACGCTGATGCCGCAGCTGGTTTCCCTCCCAGGGGCAGTATCGTAAATGGATTCGAAGCCACGTCGTCGTTTAGCGCACTCCCGCTTCAGCCAGCTCCCAGAGGCAATGGTGAGCCTTCTGGAAGGGCTTTCTTCCTCTCCGGTCCAATCGAGAGCGGAGCTATGTCTGGTCCACTTGACGCCGGCGCCGCCGCGGAAGGGGGAGGACCCGCCTCCGGCGCCGGTGTTCCTTTCTCGGCGCCGCTGGGCGGGTTGTACGCCAAGAAGAAGCGGAAGAAGGGGATCCCCGGGCTTAGGAAGGCGTTCCATCGGAGAAGCCTCTCGGAGATGAAGCGGCCTTGGGTGGTGCCCGTGCTGAACTTCGTCGGGAGGAAGGAAGATCCGCCGGAGACTGAAGGAGGGAGCGGGGCTGCAGCGCCGGAGGTGGGGAAGGGCGAGAGCAATGTGCAGTGGGCGCTGGGGAAGGCAGGGGAGGATCGCGTGCACGTGGTGGTGTCGGAGGAGCAGGGTTGGTTGTTCGTGGGGATCTACGACGGCTTCAACGGCCCCGACGCGCCGGAGTTCTTAATGGGTCACCTCTACCGTGCTGTTCACAGTGAGCTTCAGGGGTTGTTTTGGGAAGTCGAAGAAGAAGAAAAAGCAGTGGAAACTAACCCCTCGAGTGAACCTGCATCTGCACCTGCAGCTGAATCGTCAATGGCTGCTGAAGAAGATTTCAAGGACGATGGAGGGTCAGCAAAGAGAGTGACATTTCAGGTGGAGGGAACGGAGAGCAGGCGGCGCAGGCTGTGGGAGCTTCTTGCGGAGGATGCTGCTGAAGATGGGCTTGATCTTTCGGGTTCGGACAGGTTTGCATTTTCGGTTGATGATGCACTCAGCGTGAGCAAGGAGGGCTCATCAGGTAGTAGAAGGTGGATGGTGTTGTCAAAATTGAAGCATGGATTGTCAAAGCACAAGGAGGGCCGTGGGGGGAAGTTGTTACCTTGGAACTTGGCTACGGAAGATAAAGAGAAGGTTGAAGTGGAAACCCGGGCAGAAGAGAAATCTCATGGTGGGGATGGCACTGGCAATGGCAATGGTGGTGGTAGAAGACGGAAAGTGGGTCCAGTGGATCATGATCTGGTTTTGAGGGCATTGGCTCGGGCACTTGAGATGACAGAACTTGCATATTTGGATATGACGGATAAAGTTATCGATACAAATCCGGAGCTTGCTCTAATGGGGTCTTGCCTTCTAGTTGCTTTGATGAGGGGCGAGGATGTGTATGTGATGAACGTGGGTGATAGCAGGGCCATTGTTGCTCAGTATGAGCCCATAGAAGTTGGTTGTAGCAAGGAATCCGGAAGTCATGGGGATGTTGGGTCAGGTGCAGAGAGCATTACAGAGGAGTCTTCATTAGGCCAAGGTGAACGTGCCATCAGGTCGGGGAAGGAGGGTCCTGCTCAGGAAATGAGGTTGGTGGCATTGCAATTGTCCACTGACCACAGCACGAGTGAAATCATTAGGATCAAGAATGAACATCCTGATGATAGCCACTGTATTGTAAATGATAGAGTGAAAGGCCGTCTTAAGGTCACCAGAGCGTTCGGGGCAGGATTTTTGAAACAGCCAAAATTCAATGATGCAGTACTAGAAATGTTTCGAAATGAATATATTGGAACTGCTCCATATGTATCCTGCTGCCCTTCATTACGTCATCATAGATTATGCCCTAGAGATCAGTTCTTGATCCTCTCATCTGATGGGTTATATCAATATCTAAGCAATCAAGAAGTGGTTTCTCAAGTGGAGAGCTTCATGGAAAAGTTTCCTGATGGAGATCCTGCCCAACATTTGATTGAGGAGCTGCTTGTCCGTGCAGCCAAAAAGGCTGGAATGGATTTTCATGAGTTGCTGGATATCCCTCAAGGAGATCGGAGGAAGTACCATGATGATGTTACTGTTATGGTGATATCACTCGAAGGAAGAATCTGGAAGTCATCAGGGAAGTACCCGTGA 2322 0.5301 MGRTSSLCNLFSCFAPPSTNDHHQQPPELAFQETEPLDETLGHSFCYVRSSNRFVSSPTHSPSHSDRFLSSPSASLRFSPTHTEPVFKSISGASVSANSSAPKTVLQFDADAAAGFPPRGSIVNGFEATSSFSALPLQPAPRGNGEPSGRAFFLSGPIESGAMSGPLDAGAAAEGGGPASGAGVPFSAPLGGLYAKKKRKKGIPGLRKAFHRRSLSEMKRPWVVPVLNFVGRKEDPPETEGGSGAAAPEVGKGESNVQWALGKAGEDRVHVVVSEEQGWLFVGIYDGFNGPDAPEFLMGHLYRAVHSELQGLFWEVEEEEKAVETNPSSEPASAPAAESSMAAEEDFKDDGGSAKRVTFQVEGTESRRRRLWELLAEDAAEDGLDLSGSDRFAFSVDDALSVSKEGSSGSRRWMVLSKLKHGLSKHKEGRGGKLLPWNLATEDKEKVEVETRAEEKSHGGDGTGNGNGGGRRRKVGPVDHDLVLRALARALEMTELAYLDMTDKVIDTNPELALMGSCLLVALMRGEDVYVMNVGDSRAIVAQYEPIEVGCSKESGSHGDVGSGAESITEESSLGQGERAIRSGKEGPAQEMRLVALQLSTDHSTSEIIRIKNEHPDDSHCIVNDRVKGRLKVTRAFGAGFLKQPKFNDAVLEMFRNEYIGTAPYVSCCPSLRHHRLCPRDQFLILSSDGLYQYLSNQEVVSQVESFMEKFPDGDPAQHLIEELLVRAAKKAGMDFHELLDIPQGDRRKYHDDVTVMVISLEGRIWKSSGKYP 773
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu05g00513 773 CDD PP2Cc 479 761 IPR001932 -
Adu05g00513 773 Pfam Protein phosphatase 2C 500 547 IPR001932 -
Adu05g00513 773 Pfam Protein phosphatase 2C 598 726 IPR001932 -
Adu05g00513 773 Gene3D - 246 768 IPR036457 -
Adu05g00513 773 MobiDBLite consensus disorder prediction 342 360 - -
Adu05g00513 773 MobiDBLite consensus disorder prediction 448 475 - -
Adu05g00513 773 SMART PP2C_4 250 759 IPR001932 -
Adu05g00513 773 MobiDBLite consensus disorder prediction 553 587 - -
Adu05g00513 773 PANTHER PROTEIN PHOSPHATASE 2C 29 23 771 - -
Adu05g00513 773 PANTHER PROTEIN PHOSPHATASE 2C 23 771 IPR015655 GO:0004722|GO:0006470
Adu05g00513 773 ProSiteProfiles PPM-type phosphatase domain profile. 249 761 IPR001932 -
Adu05g00513 773 SUPERFAMILY PP2C-like 263 762 IPR036457 -
Adu05g00513 773 MobiDBLite consensus disorder prediction 318 360 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu05g00513 Adu-Chr5 5396345 5400928 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu05g00513 35 772 PP2C-type Phosphatase Gene Family AT2G35350 57.828 0.0 773
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu05g00513 - - gmx:100775371 1001.5
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu05g00513 05 5396345 5400928 Adu01g01251 01 28154425 28159626 PCT