Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu05g00499 ATGGGAACTGTTCAAGGAGCAAGAAAGAGTAAAACTTGTTGCTGCAGAATTGGTGGGGCATTTTCTTTTCATCCAAGGGGATTGAGTGATGATGCCAAACCAGCTATGGTTTGCACTGCCAATGATTTACATGGTTGGAAGGACTTTCCAAAGGGTCTTAGGGTTCTTCTCCTTGAAAGAGACAGCACTTCTGCTTCTGAGATAAGAGCCAAACTTGAGGCCATGGACTATCACGTTTCTACCTTCTACGATGAGAATGAAGCATTGTCAGAAATTTCAAATAGGCTCGAAGGATTCCATGTGGCCATTGTGGAGGTGAGTACAAGTAGCAGCCAGAGAGGCTTTAAATTTCTTGAGAATGCCAAGGACTTGCCAACCATCATGACTTCAGATACTCAGTGCTTGAGCACTATGATGAAGTGCATTGCGCTTGGCGCTGTTGAGTTCCTATGTAAACCACTCTCTGAGGACAAACTCAGAAATATCTGGCAGCATGTGGTTCATAAGGCATTCAATGCTGGGGCAAGTGTCTTGTCCGAATCACTAAAACCGGTTAAAGAGTCTGTAGAATCCATGTTGCAGCTGCAAACAGAAAATGGACATCTTGAGAGTAAAATTTCCATTGATTTAGAGAATATATCAAGGTTTAGTGATAATTACCATGAGCAGTCTGCCGGAAGTGATAAATATCCGGCTCCTTCGACACCTCAATTAAAACAGGGAGCAAGGTTACTGGATGATGGTGATTGCCAAGAGCATACAAATTGCTCGAATGAAAAAGAAAGTGGGGAACATGAAGGGGAATCTAAATCTGTTGAAGCATCAAGTGAGAATTTGAATGAAGGTACTCAACCACAGAAACCTGAAGAGACTCTAATTAAACAGGAAGAGGATTTTGTTGCTGATGGTTCCAATGGTGAAAGTACTGTTCCTTTGAATCCTCATGATAGAAGGTCTCTTAGAAGCACCAATGGAAATATAACATCTCCAAATAAAGCAGTGGTCCTTAGTGATACTTGTCAAAACAAAGCTAACCGGAAGAAGTTGAAAGTAGACTGGACTCCTGCATTGCACAAAAAGTTTGTGCAGGCAGTGGAACAATTAGGTATTGATCAAGCCATTCCTTCTCGCGTACTGGAGCTGATGAAAGTGGAGGGCTTGACTAGGCATAATGTGGCAAGCCATCTTCAGAAATACAGACTACATAAGAGACAAATGATGCCCAAGGAAGAAGATCGAAGATGGCAAAATCAAAGAGATACCGTGCGCTGGAAAAGGCCAGTTATGGCCTATCCTCCACATCATTATAATCATGGCCTGTCTCCACCTCCTGTATATCCAATGTGGGGACAATCCGGAACTCAAACAACCGGTGCACAGTTTTGGGGACCTCCTGGTTATACCTGGTTGCGGCCTACAGAAAATTGGCACTGGAAGCCTTTTCCAGGGGTGCATGTGGATGCATGGGGTTGTCCAGTGTTACCAGCTACTCAAGCTCCTTACCTTTCTTACACTCAACATATGGCTGGATTGCACAATGGTAAATCAGCGGATTATAGATATGGCATGCCACCAAGTTCATTTGGGCATTATCCGGCAGATGAAGTTGTTGACAAAGTTGTAAAGGAAGCAATAAGCAAGCCATGGCTACCGTTACCCTTGGGCCTCAAGCCTCCTTCCACGGACAGCGTGTTGGCCGAGCTCTCCAGGCAAGGCATATCCCCCATCCCTCTTGACTCTAAGGGCTCTAAACCCTGCTGA 1761 0.4441 MGTVQGARKSKTCCCRIGGAFSFHPRGLSDDAKPAMVCTANDLHGWKDFPKGLRVLLLERDSTSASEIRAKLEAMDYHVSTFYDENEALSEISNRLEGFHVAIVEVSTSSSQRGFKFLENAKDLPTIMTSDTQCLSTMMKCIALGAVEFLCKPLSEDKLRNIWQHVVHKAFNAGASVLSESLKPVKESVESMLQLQTENGHLESKISIDLENISRFSDNYHEQSAGSDKYPAPSTPQLKQGARLLDDGDCQEHTNCSNEKESGEHEGESKSVEASSENLNEGTQPQKPEETLIKQEEDFVADGSNGESTVPLNPHDRRSLRSTNGNITSPNKAVVLSDTCQNKANRKKLKVDWTPALHKKFVQAVEQLGIDQAIPSRVLELMKVEGLTRHNVASHLQKYRLHKRQMMPKEEDRRWQNQRDTVRWKRPVMAYPPHHYNHGLSPPPVYPMWGQSGTQTTGAQFWGPPGYTWLRPTENWHWKPFPGVHVDAWGCPVLPATQAPYLSYTQHMAGLHNGKSADYRYGMPPSSFGHYPADEVVDKVVKEAISKPWLPLPLGLKPPSTDSVLAELSRQGISPIPLDSKGSKPC 586
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu05g00499 586 Gene3D - 50 170 - -
Adu05g00499 586 MobiDBLite consensus disorder prediction 306 330 - -
Adu05g00499 586 MobiDBLite consensus disorder prediction 273 289 - -
Adu05g00499 586 MobiDBLite consensus disorder prediction 302 330 - -
Adu05g00499 586 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 348 403 IPR006447 GO:0003677
Adu05g00499 586 PANTHER TWO-COMPONENT RESPONSE REGULATOR-APRR2-LIKE PROTEIN 36 584 - -
Adu05g00499 586 PANTHER TRANSCRIPTION ACTIVATOR GLK1 36 584 IPR044825 GO:0003700|GO:0045893
Adu05g00499 586 Gene3D - 344 406 - -
Adu05g00499 586 SUPERFAMILY CheY-like 51 169 IPR011006 -
Adu05g00499 586 ProSiteProfiles Response regulatory domain profile. 54 167 IPR001789 GO:0000160
Adu05g00499 586 MobiDBLite consensus disorder prediction 220 234 - -
Adu05g00499 586 Pfam Myb-like DNA-binding domain 351 400 IPR001005 -
Adu05g00499 586 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 345 404 IPR017930 -
Adu05g00499 586 MobiDBLite consensus disorder prediction 245 272 - -
Adu05g00499 586 SUPERFAMILY Homeodomain-like 347 405 IPR009057 -
Adu05g00499 586 MobiDBLite consensus disorder prediction 220 290 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu05g00499 Adu-Chr5 5234184 5239235 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu05g00499 36 580 Response Regulator Gene Family AT4G18020 48.870 7.29e-143 422
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-ARR-B Adu05g00499 Myb_DNA-binding 3.4e-07 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu05g00499 - - gmx:100779121 814.683
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu05g00499 05 5234184 5239235 Adu01g01266 01 28784988 28791227 PCT