Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu05g00476 ATGGCAGAAACGTCTCAAGCCATGGCTATTCCACGTGGAAGCATTGCAATAAATCAACCAGCAGCAATGGTGCACAATTTTTCAATTCCGATTTCAATCAAGTTAGATGAGGAAAACTATTTTCCTTGGAAGGATCAAGCTAAAGCCTCCATCGAAGCTCATGAGCTTGTGGATTTCATCAATGGAGTGAATATTCCAACACAATTTCGATTAGAAGAAAATAAAAGAAATGGCATAGTAACTGCAGAATTCAAGATCTGGAAGAGGCAAGATTCTTTCTTGAAAACCTGGCTCCTAGCCTCAATGACTCCGTCATTTGCAGCAAGAATGGTAGGATGTACAACCTCTCATCAAATCTGGCAGAGACTTCAGGACTTTTTTGCTGCACAAATGAAAGCCAAGGTCAGGCAATTGAGAGCAAAGCTCAGCAACACAAAGAAAGAAGGTACAATGGCAAATTACTTGTTAGAAATAAAGAAAACTGTGGATGCATTAGTGTCAGTAGGAGCTCAAATTGATGAATCAGCACATGTTGAAGCCATTCTTGAAGGCCTCTCTGAAGAATATAGCTCCTTTATCACATCAATCAACACTAGAGACACGCCTCTTCAAATTGGAGCGTTAGAAGCAATGCTGATGGCACAAGAAGAATGGTTAGAGAAATTCAAGAAAGCAGAACCAATGATGGCAAATGTTGCACAGTTTCATCCGTCTCAACAACGCAGATACAATTCTGAATCTATCTATGGTGATAGAGAAGGATATAGGAATTTTTCAAGCAATAGAGGCAGTTTCTTGCAAAGAGGACGAGGAAATGGCAGAATGAACTCTAGTCGAGCAAATCCGCGACGAGAAAGAGGAAACTATGGCAGCTATGGAAGAAATTATGATAGAATAGTCTGTCAAGTGTGCGACAAGGCAGGTCACAGTGCTCGTGATTGTTGGTATAGATACAATAATCAGAACAGTAGTGGAGGTGGAAGCACTCAGTCAACTGGCAGAACTAGTGCTAATATTGCTACGAGCAACATTCCTCTAGATCAAGCAATAgtttatgatccaaattggtacccggattctgAATCACCCTTATCCTCCACCCTCCCAACTATCCCTCTCATTCATTCCACCTTGCCTAGTTCAGTTCCTCCTCACCAATCTATTAACTCAGATCCCCAATATACAGATTTGGCCTATCAAGTCAGCAATTCACATGCCAACACCACTAATTCCATCAACCCTTCAAGACCTGCAGCTGTCTCCACACTCTCTGCACCATCTAACACTCATTCCATGACTACCCGTGCCAAGAACAGTATCACCAAACCAAAACTCTTCAATTCTGAACTACACTCCTTCCCTTTACCCAAAACAGCCAAAGAAGCCATGACAATACCACATtggcgacaagcaatggaagacgaatatgcagcattgatgaagaacagtacctggcagctcactgctctgcctccgaacaggcgtgcaattgAATATTCGGTTAAGTTCAACCGAATTCATGCTTACAATATGATGTGTTTATTCTTCAAACGAAAATCCAAATCCGAGCCACAGCTGCAAAAAACAACCAGGAACAGCAAGGTCAAGTCCACCAACTCGCGATCGTTATCGCCATCGCCAAGGAGTGTTAATGAATTGTATAAGGAGAACCAGCACAATTTCAGGGTCTTCACTCTCAGGGAGCTCGTAGATGCAACCAATGGTTTCAATAGAACGCTCAAGATCGGTGAAGGTGGTTTCGGAAGTGTTTATAGAGGAACCATTCCACCTCTACATCGACATGAGGATCCAATTCTCGTTGCTATCAAAAAGCTCAACACTCGTGGCTTTCAGGGGCACAAAGAATGGCTTGCTGAAGTTCAATTTCTCGGCATCGTTAACCACCCCAATTTGGTTAAGTTATTGGGATACTGCTCTGTAGACGCCGAGAGAGGAATTCAAAGGCTATTGGTGTATGAATTCATGCCAAATAGGAGCCTAGAGGATCATCTTTTCAACCATTCTTTACCTCACTTGCCTTGGAAAACTAGATTGCAGATCATGCTTGGTGCTGCTGAAGGATTGGATTACTTACATGAGGGATTGGAAGTTCAGGTGATCTACAGAGATTTCAAATCTTCCAATGTGCTGTTGGACAAAAGTTTCCATCCCAAGCTCTCGGATTTCGGTCTAGCTAGGGAGGGCCCAACCGGTGATCAGACTCATGTATCTACTGCAGTAGTTGGAACACAGGGATATGCAGCGCCGGAGTATGTTGGAACAGGACATCTCAAAGCTAAGAGTGACATATGGAGTTTCGGCGTGGTGCTCTATGAGATTCTCACAGGCAGGAGGGTACTGGAAAGAGATCGTCCCACAGGAGAACAGAAGCTTCTAGAGTGGGTCAAGAAGTACCCTGCTGATACTAGCAGATTCAGCACCATAGTAGACCCTCGCCTCAGGAACCAATACTCCCTTGTTTCGGCTCGAAAGATNNNNNNNNNNNNNNNNNTGGAAAGCTTGAAGCAAGCATTGCAGCTTTCAGAAACCTCAAACAATTTTCAAAAAGGTTAA 2574 0.4079 MAETSQAMAIPRGSIAINQPAAMVHNFSIPISIKLDEENYFPWKDQAKASIEAHELVDFINGVNIPTQFRLEENKRNGIVTAEFKIWKRQDSFLKTWLLASMTPSFAARMVGCTTSHQIWQRLQDFFAAQMKAKVRQLRAKLSNTKKEGTMANYLLEIKKTVDALVSVGAQIDESAHVEAILEGLSEEYSSFITSINTRDTPLQIGALEAMLMAQEEWLEKFKKAEPMMANVAQFHPSQQRRYNSESIYGDREGYRNFSSNRGSFLQRGRGNGRMNSSRANPRRERGNYGSYGRNYDRIVCQVCDKAGHSARDCWYRYNNQNSSGGGSTQSTGRTSANIATSNIPLDQAIVYDPNWYPDSESPLSSTLPTIPLIHSTLPSSVPPHQSINSDPQYTDLAYQVSNSHANTTNSINPSRPAAVSTLSAPSNTHSMTTRAKNSITKPKLFNSELHSFPLPKTAKEAMTIPHWRQAMEDEYAALMKNSTWQLTALPPNRRAIEYSVKFNRIHAYNMMCLFFKRKSKSEPQLQKTTRNSKVKSTNSRSLSPSPRSVNELYKENQHNFRVFTLRELVDATNGFNRTLKIGEGGFGSVYRGTIPPLHRHEDPILVAIKKLNTRGFQGHKEWLAEVQFLGIVNHPNLVKLLGYCSVDAERGIQRLLVYEFMPNRSLEDHLFNHSLPHLPWKTRLQIMLGAAEGLDYLHEGLEVQVIYRDFKSSNVLLDKSFHPKLSDFGLAREGPTGDQTHVSTAVVGTQGYAAPEYVGTGHLKAKSDIWSFGVVLYEILTGRRVLERDRPTGEQKLLEWVKKYPADTSRFSTIVDPRLRNQYSLVSARKXXXXXXXESLKQALQLSETSNNFQKG 857
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu05g00476 857 Gene3D Phosphorylase Kinase; domain 1 548 661 - -
Adu05g00476 857 SUPERFAMILY Retrovirus zinc finger-like domains 284 321 IPR036875 GO:0003676|GO:0008270
Adu05g00476 857 PANTHER OS01G0588500 PROTEIN-RELATED 528 833 - -
Adu05g00476 857 ProSiteProfiles Protein kinase domain profile. 576 857 IPR000719 GO:0004672|GO:0005524|GO:0006468
Adu05g00476 857 ProSitePatterns Protein kinases ATP-binding region signature. 582 611 IPR017441 GO:0005524
Adu05g00476 857 MobiDBLite consensus disorder prediction 405 431 - -
Adu05g00476 857 SUPERFAMILY Protein kinase-like (PK-like) 557 824 IPR011009 -
Adu05g00476 857 Pfam Protein kinase domain 578 794 IPR000719 GO:0004672|GO:0005524|GO:0006468
Adu05g00476 857 Gene3D Transferase(Phosphotransferase) domain 1 662 849 - -
Adu05g00476 857 MobiDBLite consensus disorder prediction 260 284 - -
Adu05g00476 857 MobiDBLite consensus disorder prediction 260 289 - -
Adu05g00476 857 Pfam gag-polypeptide of LTR copia-type 87 217 - -
Adu05g00476 857 Coils Coil 128 148 - -
Adu05g00476 857 PANTHER RECEPTOR-LIKE KINASE PLANT 528 833 - -
Adu05g00476 857 MobiDBLite consensus disorder prediction 317 340 - -
Adu05g00476 857 ProSiteProfiles Zinc finger CCHC-type profile. 301 314 IPR001878 GO:0003676|GO:0008270
Adu05g00476 857 MobiDBLite consensus disorder prediction 524 551 - -
Adu05g00476 857 ProSitePatterns Serine/Threonine protein kinases active-site signature. 706 718 IPR008271 GO:0004672|GO:0006468
Adu05g00476 857 MobiDBLite consensus disorder prediction 526 551 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu05g00476 Adu-Chr5 4957133 4965327 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu05g00476 513 824 Glycoside Hydrolase AT3G07070 44.923 6.82e-85 275
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Adu05g00476 Pkinase 4.8e-42 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu05g00476 - K00924 adu:107487526 683.33
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu05g00476 05 4957133 4965327 Adu01g01301 01 30790808 30793905 PCT