Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu05g00468 ATGGAGGAACGCTATGAGCCAATCAAGGACCTTGGTTCTGGAAATTTCGGAGTTGCTAGGTTGGCTAAAGACAAGAAAACAGGGGAGCTTGTTGCTGTTAAATACATTCAAAGGGGTAAAAAGATTGATGAGAATGTTCAAAGGGAGATAATTAACCACCGATCTCTAAGGCACCCTAACATTATCAGGTTCAAAGAGGTGTTTCTCACTCCAACTCATTTAGCTATTGTTCTGGAATATGCTGCTGGTGGTGAACTCTTTGGGAGGATTTGCACAGCTGGTCGATTTAGCGAAGATGAGGCAAGATTTTTCTTCCAGCAACTCATATCTGGAGTTAGCTACTGTCATTCAATGCAAATTTGTCATAGAGATCTGAAACTGGAAAACACTCTCTTGGACGGTAATCCAGCACCTCGACTTAAGATTTGTGACTTCGGTTTCTCCAAGTCTGCATTGCTGCATTCGCAGCCTAAGTCAACAGTTGGAACACCAGCATATATTGCTCCAGAGGTTTTGTCTCGAAAGGAGTATGATGGAAAGATTGCAGATGTTTGGTCATGTGGGGTGACTCTGTATGTAATGTTAGTTGGAGCATACCCATTTGAAGATCCAGAAGATCCTAGAGACTTCAGAAAGACTATTGGGAGAATAATGAGCGTGCAGTATTCTATACCTGATTATGTGCGTCTTTCTTCAGAGTGTAGGCATCTTCTCACTTGCATTTTTGTTGCCAATCCAGCCAAGGCAAGTATTATATTAAGGATTACTATTCCGGAGATAAAACAGCACACATGGTTCTTGAAGAACTTGCCTAGAGAGATAATTGAGGCTGATAGAAGAATCAATGAAGAAAGTGGGAAGGAGGAGCCACCAAGCCAAAGTGTTGAAGAAATCATGTGTATAGTCAAAGAGGCAAGGAAACCATATCCAGGATTAAAATTGGATTCTGAAGATGCTGAAGTTAAAGAGGGACTTAATGTTACTGAAGACTCTAAAAAACCTCTTTCATCCTTAACTTAA 1020 0.4088 MEERYEPIKDLGSGNFGVARLAKDKKTGELVAVKYIQRGKKIDENVQREIINHRSLRHPNIIRFKEVFLTPTHLAIVLEYAAGGELFGRICTAGRFSEDEARFFFQQLISGVSYCHSMQICHRDLKLENTLLDGNPAPRLKICDFGFSKSALLHSQPKSTVGTPAYIAPEVLSRKEYDGKIADVWSCGVTLYVMLVGAYPFEDPEDPRDFRKTIGRIMSVQYSIPDYVRLSSECRHLLTCIFVANPAKASIILRITIPEIKQHTWFLKNLPREIIEADRRINEESGKEEPPSQSVEEIMCIVKEARKPYPGLKLDSEDAEVKEGLNVTEDSKKPLSSLT 339
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu05g00468 339 SMART serkin_6 5 266 IPR000719 GO:0004672|GO:0005524|GO:0006468
Adu05g00468 339 Gene3D Transferase(Phosphotransferase) domain 1 81 273 - -
Adu05g00468 339 CDD STKc_SnRK2 4 265 - -
Adu05g00468 339 Pfam Protein kinase domain 5 266 IPR000719 GO:0004672|GO:0005524|GO:0006468
Adu05g00468 339 ProSitePatterns Serine/Threonine protein kinases active-site signature. 120 132 IPR008271 GO:0004672|GO:0006468
Adu05g00468 339 PANTHER SERINE/THREONINE KINASE 3 307 - -
Adu05g00468 339 ProSitePatterns Protein kinases ATP-binding region signature. 11 34 IPR017441 GO:0005524
Adu05g00468 339 Gene3D Phosphorylase Kinase; domain 1 1 80 - -
Adu05g00468 339 PANTHER SUCROSE NONFERMENTING 1(SNF1)-RELATED KINASE 3 307 - -
Adu05g00468 339 SUPERFAMILY Protein kinase-like (PK-like) 3 274 IPR011009 -
Adu05g00468 339 ProSiteProfiles Protein kinase domain profile. 5 266 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu05g00468 Adu-Chr5 4885650 4887478 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu05g00468 4 276 CBL-interacting serine-threonine protein kinases AT4G24400 42.908 6.43e-66 212
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_OST1L Adu05g00468 Pkinase 7.7e-69 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu05g00468 K14498 - gmx:547790 539.265
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu05g00468 05 4885650 4887478 Adu01g01325 01 32047885 32051402 PCT