Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu05g00463 ATGGAACTTAAGTACCACCAATTTGGCCTTGTTTGTGTCATAATGCTCTTACCTTTAATGTGTACTTCTCAAGACTCATTTACGTGCTCCAGAGCAACCTATTATGGCAGCCCTGAATGCACTGCCAACCCAACGGGAGCTTGTGGCTTTGGCGAATATGGAACGGCGATCAACGATGGCAGCGTGGCAGGCGTGTCTTGGCTATGGCGGAATGGATCTGGCTGTGGTGCATGCTATCAAGTTAGGTGCAAAATAGCAGAATACTGCGATGACTATGGAGCATATGTAGTGGTAACAGACTTCGGCGTGGGAGACAGAACCGACTTCATTATGAGTCCACGTGCTTATTCAAGATTGGCCAAGAACGAAGATGCATCTGCAGAGCTTTTCAAATACGGTGTGGTGGACGTAGAATACAAGAGGGTACCATGCAGATACGGTGGCTATAACATCATAGTCAAGGTGAATGAGCGCAGCTACAACCCACACTACTTAGCCATTGTAACTCTCTATGTTGGTGGAACACAAGACATAACTGCCGTTCAGTTCTGGCAGGAAGATTGCAAAGAATGGAGGCCAATGCGAAGGGCGTTTGGGACAGTGTTTGATGTTGAGAACCCACCAAGGGGTGACATAAAGTTAAGGTTCCAAGTGACTGGCAGTGCAGGGGTTTATTGGGTAGAGTCCAAGACCTTTATCACCAGTGATTGGAAGGCTGGAGCATCTTATGATACTCAAATCCAGCTTGAATAG 753 0.4701 MELKYHQFGLVCVIMLLPLMCTSQDSFTCSRATYYGSPECTANPTGACGFGEYGTAINDGSVAGVSWLWRNGSGCGACYQVRCKIAEYCDDYGAYVVVTDFGVGDRTDFIMSPRAYSRLAKNEDASAELFKYGVVDVEYKRVPCRYGGYNIIVKVNERSYNPHYLAIVTLYVGGTQDITAVQFWQEDCKEWRPMRRAFGTVFDVENPPRGDIKLRFQVTGSAGVYWVESKTFITSDWKAGASYDTQIQLE 250
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu05g00463 250 Pfam Expansin C-terminal domain 153 227 IPR007117 -
Adu05g00463 250 PANTHER EXPANSIN-B3 4 249 - -
Adu05g00463 250 SUPERFAMILY PHL pollen allergen 150 244 IPR036749 -
Adu05g00463 250 Gene3D - 18 144 IPR036908 -
Adu05g00463 250 ProSiteProfiles Expansin, Cellulose-binding-like domain profile. 163 245 IPR007117 -
Adu05g00463 250 PANTHER EXPANSIN-B1-LIKE PROTEIN 4 249 - -
Adu05g00463 250 ProSiteProfiles Expansin, family-45 endoglucanase-like domain profile. 45 149 IPR007112 -
Adu05g00463 250 Gene3D - 145 246 IPR036749 -
Adu05g00463 250 Pfam Lytic transglycolase 62 139 IPR009009 -
Adu05g00463 250 SUPERFAMILY Barwin-like endoglucanases 12 148 IPR036908 -
Adu05g00463 250 PRINTS Expansin/Lol pI family signature 26 41 IPR007118 GO:0005576
Adu05g00463 250 PRINTS Expansin/Lol pI family signature 65 83 IPR007118 GO:0005576
Adu05g00463 250 PRINTS Expansin/Lol pI family signature 132 148 IPR007118 GO:0005576
Adu05g00463 250 PRINTS Expansin/Lol pI family signature 191 205 IPR007118 GO:0005576
Adu05g00463 250 PRINTS Expansin/Lol pI family signature 231 245 IPR007118 GO:0005576
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu05g00463 Adu-Chr5 4834895 4836669 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu05g00463 10 249 Expansin Gene Family AT4G17030 62.241 1.86e-113 324
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu05g00463 - - gmx:100802855 420.624
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu05g00463 05 4834895 4836669 Adu01g01343 01 33007264 33009362 PCT