Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu05g00428 ATGGATCACTGGAATTTCTCCAAACCCCCATCCCTTCCGCAAGATTCACCCTCCGCTTCTCCCTCTCTTCCTCCTCCTCCTCCTCCTCCTCCTCCTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTCCCGTCCAACCGATCCCAGAGAGAAAAGGGGCAAGCGGAACCACCGCAGGATCCAGCTGTCGCCGCAAGGAAAGTTCAGAAGGCTGACCGCGAGAAACTCCGCCGTGATCGATTAAACGACCACTTCCACGATTTGGCCAACACTTTAGATCCTGATAGGCCAAGGAATGACAAGGCAACCATCCTCACTGATACGATTCAAATGCTTAAAGATTTAACTGCCGAAGTTAATAGGTTGAAAACCGAACATAAAGCGCTTTCTGATGAGTCCCGCGAGCTAATGCAAGAGAAGAATGAACTTAGGGAAGAAAAGGCGTCGTTGAAATCGGATATAGAAAACCTTAATTCTCAGTATCAGCAGAGGGCCAGAATGATGTTCCCATGGACTGCAATCGACCACTCTGTCGTAATGGCACCACCACCTTATTCATATCCGGTTCCTATACCTATCCCTCCTGCTCCTGTTCCAATTCACCCAACTCTTCAACCCTTTCCTTATTTTGGAAATCAAAACCCTCCTCACATTCCTACTCCTTGTTCAACATATGTTCCATTCTCTGCTCCAATTAATGCCGCGCTTGACTTGCCCTCAGCTCAGTATGCTTCTGCATCTCATGTTCCCGCCCAAAAGGATTGTCGGAGCAAGTCACCACCTCATAGGAGAATCACTGATGCAGACAGATGTAGCGAGACTCATGATGTGGCTACGGAGCTTGAACTTAAGATGCCTGGATCATCAACACAGGAGGAATCTTCTTCCGGGGGAACGAAGAAGGTCAAGCATTCAGGGAGGAAGGATAGAGCCGTTGCAGAAGGGAGTGCTTCAAGCCGGTATTCAACGTCTCATGGACTTCAAGATAGCTCCAACAGTGTGGGTGACATCCCAAAGGCTGATAGTTGA 1065 0.4573 MDHWNFSKPPSLPQDSPSASPSLPPPPPPPPPXXXXXXXXXXXXXXXXXXXXXXXPSNRSQREKGQAEPPQDPAVAARKVQKADREKLRRDRLNDHFHDLANTLDPDRPRNDKATILTDTIQMLKDLTAEVNRLKTEHKALSDESRELMQEKNELREEKASLKSDIENLNSQYQQRARMMFPWTAIDHSVVMAPPPYSYPVPIPIPPAPVPIHPTLQPFPYFGNQNPPHIPTPCSTYVPFSAPINAALDLPSAQYASASHVPAQKDCRSKSPPHRRITDADRCSETHDVATELELKMPGSSTQEESSSGGTKKVKHSGRKDRAVAEGSASSRYSTSHGLQDSSNSVGDIPKADS 354
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu05g00428 354 MobiDBLite consensus disorder prediction 1 94 - -
Adu05g00428 354 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 77 127 IPR011598 GO:0046983
Adu05g00428 354 SMART finulus 83 133 IPR011598 GO:0046983
Adu05g00428 354 PANTHER TRANSCRIPTION FACTOR BHLH121 57 353 IPR044579 GO:0003700|GO:0055072
Adu05g00428 354 MobiDBLite consensus disorder prediction 78 94 - -
Adu05g00428 354 MobiDBLite consensus disorder prediction 14 35 - -
Adu05g00428 354 MobiDBLite consensus disorder prediction 309 326 - -
Adu05g00428 354 Coils Coil 117 172 - -
Adu05g00428 354 Gene3D - 76 153 IPR036638 GO:0046983
Adu05g00428 354 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 78 145 IPR036638 GO:0046983
Adu05g00428 354 MobiDBLite consensus disorder prediction 261 354 - -
Adu05g00428 354 MobiDBLite consensus disorder prediction 267 292 - -
Adu05g00428 354 CDD bHLH_AtILR3_like 82 156 - -
Adu05g00428 354 Pfam Helix-loop-helix DNA-binding domain 78 127 IPR011598 GO:0046983
Adu05g00428 354 PANTHER TRANSCRIPTION FACTOR BHLH11 57 353 - -
Adu05g00428 354 MobiDBLite consensus disorder prediction 328 354 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu05g00428 Adu-Chr5 4462477 4464314 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu05g00428 75 306 Basic Helix-Loop-Helix Transcription Factor Gene Family AT3G19860 55.508 1.15e-80 247
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Adu05g00428 HLH 4.6e-09 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu05g00428 - - adu:107487484 570.081