LGRPv2

Gene search

Sequence information

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Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Adu05g00397	ATGATAAGGTTTATCTTTAAAGCGATTCCTTATTATCATGTGGCTATAGTCATTCTTGTTATTATTTCATGTTGTGTCAAAGGTATGAGCTGTCAAGAACAGAATATACGAAAGAAGAATGAAAGTGTGCCAGCAAtctttgtgtttggggactccatagtggacacaggtaacaacaactacatcaaaaccattgcgaaatgcaatttcccaccatatggtagagactttgctgctggaggatataaacctaatgggaggttcagcaatggtttagtcccttcagatttcattgCTGAAATATTTGGAGTAAAAGATATTTTGCCACCATATCTGGATCCAAATCTGCAACTTCAAGAACTTCTTACTGGTGTAAGTTTTGCCTCGGGAGGCGCTGGATACGATCCTCTTACCTCAAAAGCAGCAGGTGCAATGTCACTATCAGATCAATTAGACAAATTGGGGGAGTACCAAAAGAAGATAAGGGAAGCAGTTGGAGAAAACAGAGCAGAAACAATAGTATCAAAGAGCATATACATAGTGTGCCTGGGAAGTGATGATATTGCTAACACTTACCTTCCATTTAGACAATCACAATATGATATTCCATCTTACACTGACTTAATGGCCTCACTAGCCTTCACATTCTTAAAGGAGCTTTATGGGGTAGGTGCTAGGAGGATTGGAGTGGTTAGCATGCCAATTATAGGGTGTGTGCCGTCACAGAGGACAGTAGAGGGAGGCATAAATAGAGCATGTTCAGATTTTGAAAATCAAGCTGCAATTCTATTCAACATGAAACTCCTCTCTCAAACAAAGCTCCTCAATAAACAGTTTCCAGATGCTAGGATCGTCTACCTCGATATTTACAACACATTGGATCAAGTGATTCAAAACCCAGCTCAATATGATTTTGAAGTAGTAGACAAAGGATGCTGTGGAACAGGAATTATAGAAGCGAGCATGTCCTGCAACTCCCTCAGCATAAACACATGTACCGATGATTCAAACTATATATTCTGGGATAGTTACCATCCTACCGAGAAAGCCTATAAATTGATCACTTCTATGGTGCTCCGTCACAAAATCAACGACTTCTTTTGA	1104	0.337	MIRFIFKAIPYYHVAIVILVIISCCVKGMSCQEQNIRKKNESVPAIFVFGDSIVDTGNNNYIKTIAKCNFPPYGRDFAAGGYKPNGRFSNGLVPSDFIAEIFGVKDILPPYLDPNLQLQELLTGVSFASGGAGYDPLTSKAAGAMSLSDQLDKLGEYQKKIREAVGENRAETIVSKSIYIVCLGSDDIANTYLPFRQSQYDIPSYTDLMASLAFTFLKELYGVGARRIGVVSMPIIGCVPSQRTVEGGINRACSDFENQAAILFNMKLLSQTKLLNKQFPDARIVYLDIYNTLDQVIQNPAQYDFEVVDKGCCGTGIIEASMSCNSLSINTCTDDSNYIFWDSYHPTEKAYKLITSMVLRHKINDFF	367

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Annotation information

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Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Adu05g00397	367	Pfam	GDSL-like Lipase/Acylhydrolase	46	355	IPR001087	GO:0016788
	Adu05g00397	367	CDD	SGNH_plant_lipase_like	44	359	IPR035669	-
	Adu05g00397	367	PANTHER	GDSL-LIKE LIPASE/ACYLHYDROLASE	12	366	-	-
	Adu05g00397	367	Gene3D	SGNH hydrolase	30	362	IPR036514	-
	Adu05g00397	367	ProSiteProfiles	Prokaryotic membrane lipoprotein lipid attachment site profile.	1	24	-	-
	Adu05g00397	367	PANTHER	GDSL ESTERASE/LIPASE EXL3	12	366	-	-
	Adu05g00397	367	SUPERFAMILY	SGNH hydrolase	45	360	-	-
	Adu05g00397	367	ProSitePatterns	Lipolytic enzymes "G-D-S-L" family, serine active site.	46	57	IPR008265	GO:0006629\|GO:0016298

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Duplication type information

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Select	Gene	Chromosome	Start	End	Duplicated_type
	Adu05g00397	Adu-Chr5	4193117	4196792	Wgd

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Functional genes information

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Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Adu05g00397	40	360	Pollen Coat Proteome	AT1G75910	39.877	4.01e-71	224

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Pathway information

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Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Adu05g00397	-		-	gmx:102668883	476.478

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