Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu05g00345 ATGGACAAAAATGCTTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCTCCTTCCTCCTCCACTGGAACACCAACATGCCCAGTTTGTAACAAAACTTTTGCAAGTTGGAAAGGTGCTTTTGGACACATGAGGAAGCACCCTGATCGCCAGTACCGTGGCTTCTTTAAGCCACCAACTTTCACGTCCTCTGCTGCCGCCACCGCCGCTGCTACTGGTGGTGCCACCACCCAGGGCTCTGCGGAGGGAGGAAGTAGTGCCGCTTCTGGCGAAGGAGGAAGTGCTGGCGCCGCCGGGCAAGTTGGAGAAGGCGGAGCATTTGATCTCAACCAGCCAATTGGAGGAGCCGGCGGTGGTGGTGAAGGAGGGAACGGTGATGAAGGAAAAGATTTAGGGTTTGATCTCAATAAGCCTGCCGATGAAGAAGACAAGGCATGA 441 0.5556 MDKNASSSSSSSSSSSSSPSSSTGTPTCPVCNKTFASWKGAFGHMRKHPDRQYRGFFKPPTFTSSAAATAAATGGATTQGSAEGGSSAASGEGGSAGAAGQVGEGGAFDLNQPIGGAGGGGEGGNGDEGKDLGFDLNKPADEEDKA 146
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu05g00345 146 PANTHER ZINC FINGER PROTEIN ZAT2-RELATED 8 144 - -
Adu05g00345 146 MobiDBLite consensus disorder prediction 50 146 - -
Adu05g00345 146 ProSitePatterns Zinc finger C2H2 type domain signature. 28 48 IPR013087 -
Adu05g00345 146 PANTHER TRANSCRIPTION REGULATORY PROTEIN SNF2-LIKE 8 144 - -
Adu05g00345 146 MobiDBLite consensus disorder prediction 128 146 - -
Adu05g00345 146 MobiDBLite consensus disorder prediction 1 29 - -
Adu05g00345 146 MobiDBLite consensus disorder prediction 58 88 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu05g00345 Adu-Chr5 3657000 3657555 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu05g00345 19 70 C2H2 Transcription Factor Family AT4G35280 44.231 2.54e-10 55.1
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Adu05g00345 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu05g00345 - - adu:107487296 119.783