Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu05g00337 ATGGGTAATTGTTTTGGTTCACCACCTACGAATGAATCACACTCTACCATCAATAAACCTCGTCATTATTCAGGTTCGTGGAGTAGTGGTGGCGATGAGAGCAAGAAGGTGGCATCATCAACAATTGATGATGGAGGAACAAGCAGCCAAGGAATTAGTAGTCATCAGTTTTCGGCATCGGAGACTTCGAGTTTCGGTGGAAGCTTCGGTGTATCGATCATAACTCACAGTGGCCAGATTCTTGAGACTCCGAATCTGAAAGTGTTCAGTTTCATGGAATTGAGAGTGGCAACGAAGAACTTCAAGCCGGATACATTGCTGGGCGAAGGTGGATTCGGAAAGGTTTACAAAGGTTGGTTGGATCAGAGAACGCTTTCTCCGGCCAAAGCGGGTTCCGGCATGGTCGTCGCCGTCAAGAGACTCAACACCGAGAGCGTTCAGGGATTTCAAGAGTGGAAGTCAGAAGTCAGCTTCTTAGGAAGGATTTCTCACCCAAATCTTGTTAAGCTTTTGGGTTATTGTAGAGAAGCTGATGAACTTCTCCTTGTTTACGAGTTTATGCCTAAGGGAAGCTTGGAGAGCCATCTCTTCAGAAGAAACTCTAATACAACAGAACCAATTTCTTGGAACACTCGTCTCAAAATAGCCATTGATGCTGCTAGAGGCTTGGCCTTCTTGCATACTTCAGAAAAGCAAGTTATATATAGAGATTTTAAGGCCTCCAATATATTATTAGATGGGGATTACAATGCAAAGATTTCCGATTTTGGATTAGCTAAATTGGGGCCTGCTGGAGGAGAATCACATGTGAGTACCAGAATCATGGGCACCTGTGGTTATGCTGCTCCAGAATACATAGCAACTGGTCATTTGTATGTGAAAAGTGATGTGTACGGATTTGGTGTAGTGCTGCTTGAAATGCTGACAGGGCTGAGAGCACTTGACACAAAGAGACCAACAAATCAGCAGAACCTTGTTGAATGGAAGAGGCATTCACTCTCTGATAAGAAGAACATTAATAAGAACATCATGGATCCAAGAATTGAGGATCAATACTCAGTCAAAGCTGCAACACAAGCAGCTCAACTTACCCTTAAATGCCTTGAACCTGTCCCCAAGAACCGCCCTTCTATGAATGAAGTCTTGAAGTCTTTGGAATCCATTGCTGCTATCAAACATAGAACCTCCAAGAAGCCTTCCAAGAAATTAAACACCATGCATAGTGCTAATTAA 1233 0.4339 MGNCFGSPPTNESHSTINKPRHYSGSWSSGGDESKKVASSTIDDGGTSSQGISSHQFSASETSSFGGSFGVSIITHSGQILETPNLKVFSFMELRVATKNFKPDTLLGEGGFGKVYKGWLDQRTLSPAKAGSGMVVAVKRLNTESVQGFQEWKSEVSFLGRISHPNLVKLLGYCREADELLLVYEFMPKGSLESHLFRRNSNTTEPISWNTRLKIAIDAARGLAFLHTSEKQVIYRDFKASNILLDGDYNAKISDFGLAKLGPAGGESHVSTRIMGTCGYAAPEYIATGHLYVKSDVYGFGVVLLEMLTGLRALDTKRPTNQQNLVEWKRHSLSDKKNINKNIMDPRIEDQYSVKAATQAAQLTLKCLEPVPKNRPSMNEVLKSLESIAAIKHRTSKKPSKKLNTMHSAN 410
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu05g00337 410 PANTHER OS01G0588500 PROTEIN-RELATED 53 398 - -
Adu05g00337 410 PANTHER SERINE/THREONINE-KINASE CX32, RELATED PROTEIN 53 398 - -
Adu05g00337 410 ProSitePatterns Protein kinases ATP-binding region signature. 107 139 IPR017441 GO:0005524
Adu05g00337 410 Gene3D Transferase(Phosphotransferase) domain 1 187 409 - -
Adu05g00337 410 Pfam Protein tyrosine and serine/threonine kinase 105 385 IPR001245 GO:0004672|GO:0006468
Adu05g00337 410 ProSiteProfiles Protein kinase domain profile. 101 388 IPR000719 GO:0004672|GO:0005524|GO:0006468
Adu05g00337 410 ProSitePatterns Serine/Threonine protein kinases active-site signature. 233 245 IPR008271 GO:0004672|GO:0006468
Adu05g00337 410 CDD STKc_IRAK 107 388 - -
Adu05g00337 410 SUPERFAMILY Protein kinase-like (PK-like) 85 391 IPR011009 -
Adu05g00337 410 Gene3D Phosphorylase Kinase; domain 1 72 186 - -
Adu05g00337 410 MobiDBLite consensus disorder prediction 1 59 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu05g00337 Adu-Chr5 3599482 3605540 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu05g00337 87 385 Glycoside Hydrolase AT3G07070 49.333 1.33e-97 296
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Adu05g00337 PK_Tyr_Ser-Thr 8.1e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu05g00337 - - gmx:100794193 514.227