Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu05g00335 ATGGATTCCTCACTCAGCATCCTCTTAGTCTTCAACAACACCATCCAACCAGAGTTGTTCAGGAGCGTGCATGTATATTGCAGAGAATTATTGGATGGGGACGAAAGGGAGGAAGAAGAAGTGGTAGTTGAGAGGGAGTTTGTGTTATCTGAGAGTGGCTTCTACGTGGAAATGAAGTGCACTCCAATTCTCACATCACTCAAGCTTTGTGTTGATGATGTTTGTGAAGGTTACAAGAATGGTGTGTGGCTTTGTGTCTTTGCGTTTCATGCTGATCACACGCCTCAATTCACACACATTCCTTCAATTTTGTTGTTCGCCAGAAACTCAAAACTCAAGGCAATTCCCAACTTGCTTAATGATCTCCAGATTATATACAAGCTGGAATTGAAAGCAGAAGTCAAAGATGATCTGCTAGATTCTTCAAAGGAAGAATCACAGGGAAATAGCGATGGTCACCAATCACCACAGAAAGTCTTGCCAGTATTTAATCAGGATCTAAATTGCCTTCCTTTGGATGAAGACACAACTGAGTTGATCGACAAGAAGACAAATGTTGAAAGCTTACCAGGTTTTGGAGCAAAGAAAAGGAGGGCGCAAAGCGACCACATAGCGAAAATTGCTTTACCAGATTTGGTCAAGTACTTTGATGTGCCAATTGTAGAAGCTTCAAGAAATCTGAATATTGGGCTTACAGTTCTCAAGAGAAAGTGCAGAGAATTTGGTATTCCCCGCTGGCCACATAGGAAGATAAAATCACTTGACAATCTCATTCATGATCTTGAGGAAGAGGCGAAACACCAAGAACCAAAGGACAAGGTGTCAGCGATGGCGATGGTGAGGAGGCAAAGGATGTTGGAATGCGAAAAGGAAAACATGGAGAAGAAGCCCTTCATGGACATACAAACTGAGACCAAGAGATTCAGGCAAGATGTGTTCAAGAGAAGGCACAGAGCTAGAGCTGTTGAAAAACAAAGTTCTGCAGTTTAA 990 0.4232 MDSSLSILLVFNNTIQPELFRSVHVYCRELLDGDEREEEEVVVEREFVLSESGFYVEMKCTPILTSLKLCVDDVCEGYKNGVWLCVFAFHADHTPQFTHIPSILLFARNSKLKAIPNLLNDLQIIYKLELKAEVKDDLLDSSKEESQGNSDGHQSPQKVLPVFNQDLNCLPLDEDTTELIDKKTNVESLPGFGAKKRRAQSDHIAKIALPDLVKYFDVPIVEASRNLNIGLTVLKRKCREFGIPRWPHRKIKSLDNLIHDLEEEAKHQEPKDKVSAMAMVRRQRMLECEKENMEKKPFMDIQTETKRFRQDVFKRRHRARAVEKQSSAV 329
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu05g00335 329 PANTHER PROTEIN RKD4 8 326 IPR044607 GO:0003700
Adu05g00335 329 Pfam RWP-RK domain 207 254 IPR003035 -
Adu05g00335 329 ProSiteProfiles RWP-RK domain profile. 189 274 IPR003035 -
Adu05g00335 329 PANTHER PROTEIN RKD5 8 326 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu05g00335 Adu-Chr5 3590842 3595131 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu05g00335 15 329 AtRKD Transcription Factor Family AT4G35590 44.411 1.85e-82 251
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF RWP-RK Adu05g00335 RWP-RK 5.4e-20 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu05g00335 - - gmx:113001653 421.779
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu05g00335 05 3590842 3595131 Adu05g00335 05 3590842 3595131 ECH