Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu05g00325 ATGTCGTGCTCATCGTCGTCGGGGTCGGAGGAGGACGATGAGGGTTTCGATTCGTACCGGAAAGGAGGGTACCATGCCGTCAGAGTCGGCGATCAGTTCGCCGGTGGAAGGTACATAGCTCAGAGGAAGCTCGGTTGGGGCCAATTCTCCACCGTTTGGCTTGCTTACGATACCACCAATTCCTCATATGTTGCTCTCAAGATCCAAAAAAGTGCAGCCCAGTTTGTTCAGGCAGCACTTCATGAGATTGATGTTCTTTCATACATTGCTAAGGGTGACCCTTCAAATTCGAAGTTTGTTGTTCAATTAATTGACCACTTTAAACACACTGGCCCGAATGGGCAGCACCTTTGCATGGTCCTCGAGTTTCTTGGTGATAGCTTGCTACGTCTGATCAAATATAACCGATACAAATGCCTTCCATTGAATAAAGTTAGGGAAATGTGCAAATACATTTTGATTGGTTTGGATTACTTGCACAGAGAACTTGGTCTAATCCACACTGACCTCAAACCTGAAAATATTCTTCTACTTTCAACCATTGATGCTGCCAAAGACCCTTTTAAATCTGGACAATCTCCAATTCTGGAGAGGCCCGAGGGAGGCATCAACGGTGGAGTCACAAGTCTTATTGAGAAAAGATTGAGAAGGAGAGCTAAGAGGGCTGTTGCTAAGATATCCGAAAAAAGATCCTCAATGGGTGTAGCTGGAGAAGAGCAAAAGTCTACTAGAAACATTGATGGGATTGATATGAGATGCAAGATTGTAGATTTTGGAAATGCATGTTGGGCTGACAAGCAGTTTGCTGAAGAAATACAGACAAGGCAATACAGAGCTCCTGAAGTTATACTGCAGTCCGGCTATTCCTTCTCTGTCGACATGTGGTCTTTTGCTTGCATTGCTTTCGAGCTTGCCACTGGTGATATGTTGTTTACGCCCAAGGGTGGTCAAGGTTTTAGTGAAGACGAGGATCATCTCGCCTTGATGATGGAGCTCCTCGGAAAGATGCCCCGGAAGATTGCGATTTCTGGAGCACAATCCAAGGAATTCTTTGACAGGCACGGTGATCTGAAAAGGATCCGGAGGCTAAAATTTTTGGCACTTGACAAATTGCTGATTGATAGATATAAGTTTCCAGAGACTGACGCACGCGAGTTTACCGAATTTCTTACACCACTTCTTGATTTTGCACCGGAGAAGCGACCAACTGCACAACAGTGCTTGCAACACCCATGGATGAATTGCGAGTTAACTCCGAACGAGAATGAGTCTAGTGTGGAAACCGTGGAAGTTGGGATGAGCAACCTTAAACTCAAGGTGGGAAAGTGA 1329 0.4537 MSCSSSSGSEEDDEGFDSYRKGGYHAVRVGDQFAGGRYIAQRKLGWGQFSTVWLAYDTTNSSYVALKIQKSAAQFVQAALHEIDVLSYIAKGDPSNSKFVVQLIDHFKHTGPNGQHLCMVLEFLGDSLLRLIKYNRYKCLPLNKVREMCKYILIGLDYLHRELGLIHTDLKPENILLLSTIDAAKDPFKSGQSPILERPEGGINGGVTSLIEKRLRRRAKRAVAKISEKRSSMGVAGEEQKSTRNIDGIDMRCKIVDFGNACWADKQFAEEIQTRQYRAPEVILQSGYSFSVDMWSFACIAFELATGDMLFTPKGGQGFSEDEDHLALMMELLGKMPRKIAISGAQSKEFFDRHGDLKRIRRLKFLALDKLLIDRYKFPETDAREFTEFLTPLLDFAPEKRPTAQQCLQHPWMNCELTPNENESSVETVEVGMSNLKLKVGK 442
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu05g00325 442 ProSitePatterns Protein kinases ATP-binding region signature. 44 67 IPR017441 GO:0005524
Adu05g00325 442 ProSiteProfiles Protein kinase domain profile. 38 413 IPR000719 GO:0004672|GO:0005524|GO:0006468
Adu05g00325 442 SMART serkin_6 38 413 IPR000719 GO:0004672|GO:0005524|GO:0006468
Adu05g00325 442 PANTHER SERINE/THREONINE KINASE FAMILY PROTEIN 5 442 - -
Adu05g00325 442 Gene3D Phosphorylase Kinase; domain 1 24 123 - -
Adu05g00325 442 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 5 442 - -
Adu05g00325 442 CDD STKc_SRPK 27 413 - -
Adu05g00325 442 ProSitePatterns Serine/Threonine protein kinases active-site signature. 165 177 IPR008271 GO:0004672|GO:0006468
Adu05g00325 442 Pfam Protein kinase domain 39 178 IPR000719 GO:0004672|GO:0005524|GO:0006468
Adu05g00325 442 Pfam Protein kinase domain 252 413 IPR000719 GO:0004672|GO:0005524|GO:0006468
Adu05g00325 442 Gene3D Transferase(Phosphotransferase) domain 1 92 413 - -
Adu05g00325 442 SUPERFAMILY Protein kinase-like (PK-like) 32 420 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu05g00325 Adu-Chr5 3455493 3459403 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu05g00325 4 414 EF-hand Containing Proteins AT5G22840 51.724 1.35e-168 483
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_SRPK Adu05g00325 Pkinase 5.4e-24 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu05g00325 K08832 - gmx:100784192 723.391
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu05g00325 05 3455493 3459403 Adu05g00325 05 3455493 3459403 ECH
Adu05g00325 05 3455493 3459403 Adu01g00760 01 10267701 10275719 PCT