Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu05g00321 ATGGATGTTTTCCAATCAACAACAAACCAGTCATTGCAGGCTGGAATGCGAGAACATATAGTACAGAGCAGTATAACTAGCTCTGGATGGGTTTCCAAAGACAGTCACAGTCACACCCACTTCACTACACAGCTAAGCTACCTTGATCTGAATGAAGACAATCATCTCAATTCACAATGTTCTCCAAAGTCCTTGTGGTCTTCCCCTGCTTCTTTTCTGGGTTCCATATTCCTCTGCAATTCATGGCCACTGTTTAAAGCAACTGGTCCAAACATGGTTAAAGTTTGGTTCTTGGTGTTGATTATTCTCTCCAATGGATTCTATTCAAATGGGGCAGACATGCAAAATTCCACAGTACCTGAGGTTGTAAATATTGGGGCTCTCTTCTCTTTCAATGGCTCTTTTGGTAGAAGTGTAAAATTTGCTATAAAGGCTGCAGTTGATGATGTAAATTCTGATCCATCAATTCTTGGTAAAACAAAGCTGAATCTCATACTGCAAGAGGATACAAAATACAGAGGTTTTCTTAGCATTTCTGAGGTTTTGCAGGTTGCAACGAGACATACTGTGGCTATAATTGGTCCCCAGTCATCTGTAACAGCTCATGTCATAGCTCATATTGCAAATGAGCTCCAAGTTCCTCTGCTATCGTTTTCGGCTTTAGACCCTACCCTTCATTCACTTCAGTTTCCATTCTTTATTAGAACAGGTCATAGTGATCTTTATGTGATGACTGCAATAGCAGACTTTGTTGATCACTTTGGGTGGAAAGATGTTATTGCTTTCTATGTGGATGATGATAATGGGAGGAATGGAATTGGAGCTCTAGGCGACAAGCTCGCCGATAGGCGTTGCAGGATCTCATTTAAGGCAGCTGTGAGTCCTGATGCAACTGATGAGGAGATTACTGATGTGCTTGTTCAGGTGGCTTTGGCAGAGTCAAGAGTTATAGTTCTTCACCTCAACACTGTTTGGAAACTCAAGGTTTTCAATCTTGCAAAGAATCTTGGGATGATGGAAACTGGTTATGTCTGGATAGGTACTACTTTTCTTTCTGCTGTGCTTGATATGGAAAGTCCCTTGTCTTCAGATAAAATGGATGATATTCAAGGAGTTATTACATTTCGTGTTTACACACCGGATTCTGAACTCAAAAGAAGGTTTGTTTCTAAGTGGAAGAATTTGACTCAAGCTGATAGTGCTAATGGAGGCCCTCTTGGTTTTACTCCTCTAATTCTATATGCTTATGATACTGTTTATGCTCTTGCACATGCACTTGATTCGTTTTTCAAACAAGGGAACAGAATCACTTTCTCAAATGATTCAAAGTTATCAGTGTTACAAGGTGACAACTTGCATCTTGATGCCTTGAACATCTTCAATGAAGGACCTTCCTTGCGGCGAAGCATTTATGGGGTTAACATGACCGGTGTGACAGGTCCATTCAGCTATACATCTGATGAAAATCTTGCCAATCCTGCATTTGAGATCATCAATGTAATTGGAACAGGCTCTAGGAAGATTGGTTATTGGTCTAACTACTCTGGATTATCAGTTCTTCCTCCAGATACTCTTTATTCCAAGCCTGTTAATAATTCCAGGGAAAGTAAAACTTTACTTCCGGTGATTTGGCCTGGAGACACTGATCAAAAGCCCCGTGGTTGGGTTTTTCCCAACAGTGGAAGGCTATTAAAGATTGGAGTACCAAGAAGGGTTAATTACCATGAATTTGTGTCACCGGTAAAAGGCACTGATATGTTTCAGGGATTCTGCATTGATGTGTTTCTTGCTGCAGTGGATTTGTTGCCTTATGCTGTTCCCTATAAGTTTGTCCCCTTTGGCGACGGTCGCATCAATCCTAGCGCCACAGACCTTGTCCGTCGGATCACAACCGGTGAATTTGATGGTGCTGTTGGTGACATTGCCATTACTACAGAAAGAACAAGGATGGTGGATTTTACACAGCCTTATATTGAGTCTGGTCTAGTTGTAGTTGCACCAGTTAGGAAGGCAGAATCCAATGCTTGGGCGTTTTTGTCGCCGTTTACGCCCATGATGTGGGCTGTCACAGCTATGTTTTTCTTGTTTGTGGGAGCTGTTGTTTGGATATTGGAGCATAGAGTTAATGATGACTTTAGGGGACCTCCCAAGAAACAAGTAGTTACTATCTTATGGTTCAGTTTTTCAACTATGTTCTACTCACACAGGGAAAATACAGTTAGCACTCTCGGTCGCTTAGTGCTGATTATATGGTTATTTGTAGTTCTTATAGTTAACTCGAGTTACACAGCGAGTCTAACCTCAATCCTCACAGTGCAACAACTTTATTCACCCATCAAAGGCATTGAAAGTTTGGTAAATAGCAAGGATCCTATTGGTTACACTCAAGGTTCTTTCGCGAAAAATTATTTGATTCAGGAAATTGGCATTGCTGAATCGAGGCTGGTTCCTTTGAACACACCGGAGGAAGCTGCTAATGCTCTTAAAAAGGGTCCCCATGGTGGTGGTGTCTCTGCATACATTGATGAACGTTCCTACATAGAGCTCTTCCTTTCAAGCCGGTGTGATTTCACTGTTATTGGTCAAGAGTTCACTAGAGATGGTTGGGGATTTGCCTTTCCGCGAGACTCGCCTTTAGCAGTAGACCTGTCAACAGCAATTCTGGAAATGGCAGAGAATGGAGACCTACAAAGGATCCATGACAAGTGGCTTCTGCGCAGCGCCTGCTTGTCGCAGGGGACGAAACTGGAAGTGGAAAGACTAAACCTTCAAAGCTTCTGGGGCCTCTATCTGCTATGTGGCTTTGCCTGCTTCATTGCTCTCTTGATATATCTCATACAAGTGACTAGGCAGTACTTCAAGCATGGCTCTGATGAACTTGACCCTTCAGAGCAGGGCTCATCTTCAGGATCTGCGCGCCTTCGGAGCTTCCTTTCATTTGTGGATGAAAAGGAGGAGACAGTTAAGAGCCGCTCCAAGAGAAGGCAAATGGAGAAGATCTCATACAGAAGCAGCATTGGATCATCTATGAGCTCAAACAAAGACTATGCTCAATCTTCTCCATACAAAAATTTTTGTGCTAATGATGCTCAATCTTCTCCACACACAACTGATTGTGCTAATGAAGCATGA 3132 0.4237 MDVFQSTTNQSLQAGMREHIVQSSITSSGWVSKDSHSHTHFTTQLSYLDLNEDNHLNSQCSPKSLWSSPASFLGSIFLCNSWPLFKATGPNMVKVWFLVLIILSNGFYSNGADMQNSTVPEVVNIGALFSFNGSFGRSVKFAIKAAVDDVNSDPSILGKTKLNLILQEDTKYRGFLSISEVLQVATRHTVAIIGPQSSVTAHVIAHIANELQVPLLSFSALDPTLHSLQFPFFIRTGHSDLYVMTAIADFVDHFGWKDVIAFYVDDDNGRNGIGALGDKLADRRCRISFKAAVSPDATDEEITDVLVQVALAESRVIVLHLNTVWKLKVFNLAKNLGMMETGYVWIGTTFLSAVLDMESPLSSDKMDDIQGVITFRVYTPDSELKRRFVSKWKNLTQADSANGGPLGFTPLILYAYDTVYALAHALDSFFKQGNRITFSNDSKLSVLQGDNLHLDALNIFNEGPSLRRSIYGVNMTGVTGPFSYTSDENLANPAFEIINVIGTGSRKIGYWSNYSGLSVLPPDTLYSKPVNNSRESKTLLPVIWPGDTDQKPRGWVFPNSGRLLKIGVPRRVNYHEFVSPVKGTDMFQGFCIDVFLAAVDLLPYAVPYKFVPFGDGRINPSATDLVRRITTGEFDGAVGDIAITTERTRMVDFTQPYIESGLVVVAPVRKAESNAWAFLSPFTPMMWAVTAMFFLFVGAVVWILEHRVNDDFRGPPKKQVVTILWFSFSTMFYSHRENTVSTLGRLVLIIWLFVVLIVNSSYTASLTSILTVQQLYSPIKGIESLVNSKDPIGYTQGSFAKNYLIQEIGIAESRLVPLNTPEEAANALKKGPHGGGVSAYIDERSYIELFLSSRCDFTVIGQEFTRDGWGFAFPRDSPLAVDLSTAILEMAENGDLQRIHDKWLLRSACLSQGTKLEVERLNLQSFWGLYLLCGFACFIALLIYLIQVTRQYFKHGSDELDPSEQGSSSGSARLRSFLSFVDEKEETVKSRSKRRQMEKISYRSSIGSSMSSNKDYAQSSPYKNFCANDAQSSPHTTDCANEA 1043
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu05g00321 1043 Gene3D - 838 866 - -
Adu05g00321 1043 Gene3D - 564 674 - -
Adu05g00321 1043 Gene3D - 867 903 - -
Adu05g00321 1043 CDD PBP1_GABAb_receptor_plant 124 519 IPR044440 -
Adu05g00321 1043 MobiDBLite consensus disorder prediction 988 1018 - -
Adu05g00321 1043 Pfam Bacterial extracellular solute-binding proteins, family 3 584 904 IPR001638 -
Adu05g00321 1043 PIRSF IGluLR_plant 91 1040 IPR017103 -
Adu05g00321 1043 CDD GluR_Plant 564 904 - -
Adu05g00321 1043 SUPERFAMILY Periplasmic binding protein-like I 118 556 IPR028082 -
Adu05g00321 1043 Pfam Ligand-gated ion channel 905 937 IPR001320 GO:0015276|GO:0016020
Adu05g00321 1043 PANTHER GLUTAMATE RECEPTOR 98 1022 - -
Adu05g00321 1043 Gene3D - 141 492 - -
Adu05g00321 1043 Gene3D - 675 801 - -
Adu05g00321 1043 PANTHER IONOTROPIC GLUTAMATE RECEPTOR 98 1022 - -
Adu05g00321 1043 Gene3D - 239 517 - -
Adu05g00321 1043 MobiDBLite consensus disorder prediction 1001 1018 - -
Adu05g00321 1043 Pfam Receptor family ligand binding region 142 502 IPR001828 -
Adu05g00321 1043 SMART GluR_14 565 906 IPR001320 GO:0015276|GO:0016020
Adu05g00321 1043 SUPERFAMILY Periplasmic binding protein-like II 538 906 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu05g00321 Adu-Chr5 3426900 3434538 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu05g00321 96 1005 Ion Channels AT3G51480 58.178 0.0 1105
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu05g00321 K05387 - gmx:100785258 1434.08
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu05g00321 05 3426900 3434538 Adu05g00321 05 3426900 3434538 ECH
Adu01g00870 01 11555342 11560429 Adu05g00321 05 3426900 3434538 ECH
Adu05g00321 05 3426900 3434538 Adu01g00870 01 11555342 11560429 PCT