Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu05g00320 ATGTCAATTTATGTGTTTACAATGATTCCTGAACCATCAGTTTCCAAATTCCAAACGAAACTTGCAAGAACAACATCAGTCACATTTTTCACACCACAGATCAAAACAAAAAAGCCTAGAATGGTGGATGACCTTCACTCTTTTCTGCACCATTTTGTGGACAATATATCCATTATCACTTTCTTGTCTGCTGAATCTACCAAGTACAAGGAAGCTTCTTCAAACATGCTTAAAGTTTGGTTCTTGGTGTTCATTGTTCTCTCCAATGGGTTCTCATCAACTGGGCAAGACATGCACAATTCCACAGTACCTGATGTTGTAAATATTGGGGCTCTCTTCAATTACAATACCACTTTTGGTAGAACTGTAAAAATTGCGATAAGAGCAGCACTCGAAGAACTGAATGCTAATCCATCTATTCTTGGTAAAACACACTTGAATGTCATACTACAAGAAGATTCTAAATACAGAGGTTTTCTGAGCATTTCTGAGGTTTTGCAGGTTGCAACAAAGCATACTGTGGCAATAATTGGTCCCCAGTCTGCTGTAACAGCTCATGTCATATCTCATATTGCTAATGAGCTCCAAGTTCCGCTGCTATCATTTTCGGCTTTAGATCCCACCCTTTCTTCACTTCAGTTCCCATTCTTTATTAGAACTAGTCATAGTGACCTTTATGTGATGACTGCAATAGCAGACTTTGTTGACTACTATGGGTGGAAAGACGTTATTGCTTTCTACGTCGATGATGATAGTGGGAGGAATGGTATTGAAGCTTTAGGTGATAAGCTTGCGGAGAAACGTTGCAGGATCTCATATAAGGCACCTATGAGCCCTGAACCGACCGATGAAGAAATTACAAACGTGCTTGTTCAGGTGGCTTTGGCAGAATCACGGGTTATAGTTGTTCACGTCAACATTTTCTTGGGCCGCAAGGTTTTCGATATTGCAAAGAGTCTTGGGATGATGGGAAGTGGGTATGTCTGGCTAGCCACTACTTTCCTTTCTGGTATACTTGAAATGAATACTCCCTTCCCTGCAGGATTTACAAATAATATTCAAGGTGTTATTACATTTCGTGTATATACACCAGATTCTGAACTCAAAAGAAGGTTTGCTTCTAAATGGAAAAATTTGACTCAAGGGGAGACTGCTAATGACCCCCTTGGATTAAGTGCTTTAGGTCTCTATGCATATGATACTGTTTATGCACTTGCTCATGCACTAGATGCATTTTTCAAACAAGGGAACCGAATTACTTTCTCAAAGGATCCAAAATTATCATTACTTCATGGAGACAACTTGGGTCTTGATACATTGAACATCTTCAATGAAGGAAATCTTTTGCGCAGAAGCATATATGAAGTTAACATGACCGGTGTGACTGGTACATTCAGGTATACATCTGACAGAGACCTTGTAAATCCTTCATATGAAATCATGAATGTGGTTGGAACAGGGTTTAGGAGTATTGGTTATTGGTCCAATTACTCTGGATTATCAGTTGATCCTCCAGAAGCTCTTTCTTCCAAACCAGCCAATAATTCCAGGGCTGGTAAAATGTTACGTCCGGTGATTTGGCCTGGAGATACTACCAAAAAACCTCGTGGTTGGGTTTTTCCAAACAATGGAAGGTTATTGAAAATTGGAGTTCCAAAAAGCATTAGTTACCATGAATTTGTCTCACAAGTACCAGGCACCGATACATTTGAGGGATTCTGCATTGAGGTATTTCTTGCTGCAGTGAATTTGTTACCTTATGCTGTCCCCTATAAATTTATCCCGTTTGGCGATGACCACAGCAATCCTAGCGCCACTGAACTTGTTCGTCTAATCACAACGGGTGAATTTGATGGTGCTGTTGGTGATATTACAATTACCACAGAAAGAACAAAGATGGTGGATTTTACACAACCTTATATTGAGTCTGGTCTAGTGGTGGTAGCACCAGTTAAGAAGACAGATTCGAATGCCTGGGCATTTTTGGCCCCATTTACGCCAATGATGTGGGCAGTCACAGCTATCTTTTTTCTATTTGTGGGAGCTGTTGTTTGGATATTGGAGCATAGAGTGAATGATGATTTTAGGGGCCCTCCCAAGCAACAAATAGTAACTACTTTATGGTTTAGTTTTTCAACCATGTTCTTTTCACAAAAGGAAAATACAGTGAGCACGCTTGGTCGCTTTGTGCTGATTATATGGCTATTTGTAGTTCTTATAGTTAACTCGAGTTACACAGCAAGTCTGACCTCAATTCTCACTGTGCAACAACTTTCTTCACCAATCAAAGGAATTGAAAGTTTAGTGAATGGAAAGGATCCTATTGGCTACACACAAGGTTCTTTTGCAAAAAATTATTTAATTGAGGAAATTGGCATTAACGAATCCAGGCTTGTTGCTCTGAACACACCGGAGGAAGCTGCGAATGCACTAAAAAAGGGTCCCCATGATGGGGGTATCTGTGCATATATTGATGAGCGTGCCTATATGGAGCTCTTCCTTTCAACCCGGTGCGATTTCACTGTTATAGGTCAAGAGTTCACCAGAGATGGTTGGGGATTTGCCTTTCCACGAGACTCTCCGTTAGCAATAGACCTGTCAACAGCAATTCTTGAAATGGCAGAGAGTGGAGACCTACAAAGGATCCACGACAAATGGCTTCTGCGCAGCGCTTGCTTATCACAAGGCACAAAGCTCGAAGTGGAAAGACTAAACCTTAAAAGCTTCTGGGGCCTCTATCTGATCTGCGGCTTTGCCTGCTTCCTTGCTCTCTTCATATATCTCATACAGATAGTTAGGCAGTACATCAAGCACTCCTCAGAGGAAGTTCACCCTGCTGATCAGAGCACGTCGTCATCAGGGTCCTCGCGCCTTCGAAGTTTCCTTTCATTTGTAGACGAAAAGGAAGAGAAGGTTAAGCACCGTTCCAAGAGAAGGCAAACAGAGATGACCTCATGCCGAAGCAGCATAGTTGGATCATCCATTAGCTTTAGCTCCAACAAAGACTACGCTCATTCATCTCCACACAAAAGTGATGGTGGTGGTGAAGCATAA 3054 0.4139 MSIYVFTMIPEPSVSKFQTKLARTTSVTFFTPQIKTKKPRMVDDLHSFLHHFVDNISIITFLSAESTKYKEASSNMLKVWFLVFIVLSNGFSSTGQDMHNSTVPDVVNIGALFNYNTTFGRTVKIAIRAALEELNANPSILGKTHLNVILQEDSKYRGFLSISEVLQVATKHTVAIIGPQSAVTAHVISHIANELQVPLLSFSALDPTLSSLQFPFFIRTSHSDLYVMTAIADFVDYYGWKDVIAFYVDDDSGRNGIEALGDKLAEKRCRISYKAPMSPEPTDEEITNVLVQVALAESRVIVVHVNIFLGRKVFDIAKSLGMMGSGYVWLATTFLSGILEMNTPFPAGFTNNIQGVITFRVYTPDSELKRRFASKWKNLTQGETANDPLGLSALGLYAYDTVYALAHALDAFFKQGNRITFSKDPKLSLLHGDNLGLDTLNIFNEGNLLRRSIYEVNMTGVTGTFRYTSDRDLVNPSYEIMNVVGTGFRSIGYWSNYSGLSVDPPEALSSKPANNSRAGKMLRPVIWPGDTTKKPRGWVFPNNGRLLKIGVPKSISYHEFVSQVPGTDTFEGFCIEVFLAAVNLLPYAVPYKFIPFGDDHSNPSATELVRLITTGEFDGAVGDITITTERTKMVDFTQPYIESGLVVVAPVKKTDSNAWAFLAPFTPMMWAVTAIFFLFVGAVVWILEHRVNDDFRGPPKQQIVTTLWFSFSTMFFSQKENTVSTLGRFVLIIWLFVVLIVNSSYTASLTSILTVQQLSSPIKGIESLVNGKDPIGYTQGSFAKNYLIEEIGINESRLVALNTPEEAANALKKGPHDGGICAYIDERAYMELFLSTRCDFTVIGQEFTRDGWGFAFPRDSPLAIDLSTAILEMAESGDLQRIHDKWLLRSACLSQGTKLEVERLNLKSFWGLYLICGFACFLALFIYLIQIVRQYIKHSSEEVHPADQSTSSSGSSRLRSFLSFVDEKEEKVKHRSKRRQTEMTSCRSSIVGSSISFSSNKDYAHSSPHKSDGGGEA 1017
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu05g00320 1017 CDD GluR_Plant 547 887 - -
Adu05g00320 1017 Gene3D - 223 500 - -
Adu05g00320 1017 Pfam Bacterial extracellular solute-binding proteins, family 3 567 887 IPR001638 -
Adu05g00320 1017 Gene3D - 543 657 - -
Adu05g00320 1017 PRINTS Metabotropic glutamate GPCR signature 243 260 IPR000337 GO:0004930|GO:0007186|GO:0016021
Adu05g00320 1017 PRINTS Metabotropic glutamate GPCR signature 176 202 IPR000337 GO:0004930|GO:0007186|GO:0016021
Adu05g00320 1017 PRINTS Metabotropic glutamate GPCR signature 208 227 IPR000337 GO:0004930|GO:0007186|GO:0016021
Adu05g00320 1017 PRINTS Metabotropic glutamate GPCR signature 227 243 IPR000337 GO:0004930|GO:0007186|GO:0016021
Adu05g00320 1017 MobiDBLite consensus disorder prediction 968 1017 - -
Adu05g00320 1017 SUPERFAMILY Periplasmic binding protein-like I 102 539 IPR028082 -
Adu05g00320 1017 Pfam Ligand-gated ion channel 888 920 IPR001320 GO:0015276|GO:0016020
Adu05g00320 1017 MobiDBLite consensus disorder prediction 983 1004 - -
Adu05g00320 1017 CDD PBP1_GABAb_receptor_plant 108 504 IPR044440 -
Adu05g00320 1017 Gene3D - 857 887 - -
Adu05g00320 1017 PANTHER GLUTAMATE RECEPTOR 82 1008 - -
Adu05g00320 1017 Pfam Receptor family ligand binding region 124 485 IPR001828 -
Adu05g00320 1017 Gene3D - 658 782 - -
Adu05g00320 1017 PIRSF IGluLR_plant 73 1010 IPR017103 -
Adu05g00320 1017 MobiDBLite consensus disorder prediction 968 982 - -
Adu05g00320 1017 Gene3D - 125 475 - -
Adu05g00320 1017 SUPERFAMILY Periplasmic binding protein-like II 523 889 - -
Adu05g00320 1017 Gene3D - 803 856 - -
Adu05g00320 1017 PANTHER IONOTROPIC GLUTAMATE RECEPTOR 82 1008 - -
Adu05g00320 1017 SMART GluR_14 548 889 IPR001320 GO:0015276|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu05g00320 Adu-Chr5 3421057 3425791 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu05g00320 80 989 Ion Channels AT3G51480 57.300 0.0 1106
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu05g00320 K05387 - gmx:100793320 1404.42