Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu05g00301 ATGGAGTTTGAATCTCTGAGTCTGGCCAATGAGGTCATTGAATTTGATATGATTGGTTTGGGGGATGATGGTGCCATTGATATTGAACATCATGTTGAAGATGATGATGACTATATCAGTGTTGACAATGTTTTTGCTGCTACTGCCGCCACCAATATAGCTGCCACTGTTGGACCTCAAATTCCTATAGGGGACACAAATCTTGAACCTTATCAGGGCATGGAATTTGAATCAGAAGAGGCTGCTAAGGCGTTTTATAATTCCTATGCTCGCCGCATTGGATTTAGTACGAGGGTGAGTATGTCCCGTCGCTCCAGACGTGATGGTGCTATAATTCAGAGGTCTTTTGTGTGTGCCAAGGAAGGTTTTCGTATGGAGAAGGAGAAGAATTCTCTTGATGGCAGAGTCAAACGACCTCGTGCTGAAACTCGTGTTGGTTGCAAGGCCATGTTGGTTGTGAAAATTCAAGTGTCTGGCAGATGGGTTGTTTCTTCATTTGTCAAGGAGCACAACCATGAATTGGTTCCACCTGATAAGGTGCATTGCCTTCGCTCTCACCGCCATGTTTCGGGTCCAGCTAAATCATTGATTGATACCTTGCAGGGTGCTGGTATAGGGCCTAGTGGAATTATGTCTGCACTTATCAAAGAATATGGTGGAATTAGCAACATTGGGTTCACTGAGCGTGACTGTAGGAACTACATGAGGAGCAGCCGGCAAAGGACCCTTGGTGGTGACACTCAAATCCTCTTGGATTACTTGAAGAGTAAACAAGCTAAGAATCCTTTGTTTTTCTATGCCGTACAAGGTGATGAGGATCGCTACATGAGTAATATCTTCTGGGCTGATCCTAAGGCCAGGACTAACTACACTTATTTTGGTGACACTGTCACATTTGACACAACATATAGGTCAAACCGCTATAGATTGCCTTTTGCACCTTTCACTGGAGTGAATCATCACGGACAGCCTGTATTATTTGGTTGTGCTCTCTTGATAAATGAATCCGAAGCATCGTTTGTCTGGCTCTTCAAAATGTGGCTTGAAGCGATGTCAGGGCAATCTCCAGTCTCAATCACTACTGATCATGATCGGGTGATTCGCGTAGCCATTAACCGTGTCTTTCCTAATACCCGTCATCGGTTTTGCAAGTGGCACATTTTTAAAGAGTGCCAAGAGAAGTTGTCTCATGTGCTTTCTGAACATGTTAATTTTGAAGCTGACCTTCATAAATGTGTTAATCTGCCAGAGTCCATTGATGAGTTTGAGTCTTGTTGGTCCTCCCTAATAGATAGTTATAATCTCAGAGAACATGAATGGCTCCAAGCAATTTATGGTGATAGGCGGCAGTGGGTTCCCGTGTACTTGAGAGACACATTTTTTGCAGAAATGTCGATAACACAGCGAAGTGATAGCATAAACTCTTACTTTGATGGGTATATTAATGCATCAACAACACTTCAGCATTTTGTTAAGCAGTATGAGAAGGCCCTAGAAAGTCGTCTTGAGAAAGAAGTTAAAGCTGATTATGACACAATAAACACCACTCCAGTTTTGAACACACCATCACCTATGGAGAAACAAGCAGCTGGGATTTACACAAAGAGATTGTTTATCAAATTTCAAGAAGAGTTGGTTGAGACATTAACTTATTTGGCAAACAAAGTAGGTGAAGAAGAAATAACTTCTGTGTATAGAGTAGCCAAATATGGGGATATTCATAGGGCTTACTTTGTCAGATTTAACTCTTTTGAGATGAAGGTTACTTGTAGTTGCCAGATGTTTGAGTTTTTGGGTCTGGTTTGTAGACATATACTGACTGTTTTTAGGGTGACAAATATTCTTACTTTACCTTCTCATTATATTCTAAAAAGATGGACCAGGAATGCTAAAAGTGGAGTCATCTTGGATGAACACACCCCTGATTTGCTAAATGGTGCACGAGAATCTCTAACTATACGATATAATAATCTTCGTCATGAGGCCCTCAAGTATGTTGATGACGGAATAAGGTCTCCAAGAGTTTACGATGTTGCTATGAGTGCGCTACAGGAGGCTGCAAATAAAGTGGCACGAGCGACTAAGAATGATGGAAGACTGGTCATTTCAAATGGAACTTATAAAGAAGATTTACGGTGGAACAATGAAGCTACTACAAGTTACAGGGATCCTCAAACCAGTTTGCAACAATCTTCATCCAAGGATGACCATGACAGAACAATTGAGAAGTTGACAAGACAACTTGACCGAGCTCAAAGGAAGTGTGAAGTTTATAGGTCAAACTTGCTGTCAATTCTAAAAGACATGGAAGAGCAGAAGCTAGAATTATCAGTAAAAGTCCAAAATATCAAGTTAGGGATGAAAGATTGA 2370 0.4122 MEFESLSLANEVIEFDMIGLGDDGAIDIEHHVEDDDDYISVDNVFAATAATNIAATVGPQIPIGDTNLEPYQGMEFESEEAAKAFYNSYARRIGFSTRVSMSRRSRRDGAIIQRSFVCAKEGFRMEKEKNSLDGRVKRPRAETRVGCKAMLVVKIQVSGRWVVSSFVKEHNHELVPPDKVHCLRSHRHVSGPAKSLIDTLQGAGIGPSGIMSALIKEYGGISNIGFTERDCRNYMRSSRQRTLGGDTQILLDYLKSKQAKNPLFFYAVQGDEDRYMSNIFWADPKARTNYTYFGDTVTFDTTYRSNRYRLPFAPFTGVNHHGQPVLFGCALLINESEASFVWLFKMWLEAMSGQSPVSITTDHDRVIRVAINRVFPNTRHRFCKWHIFKECQEKLSHVLSEHVNFEADLHKCVNLPESIDEFESCWSSLIDSYNLREHEWLQAIYGDRRQWVPVYLRDTFFAEMSITQRSDSINSYFDGYINASTTLQHFVKQYEKALESRLEKEVKADYDTINTTPVLNTPSPMEKQAAGIYTKRLFIKFQEELVETLTYLANKVGEEEITSVYRVAKYGDIHRAYFVRFNSFEMKVTCSCQMFEFLGLVCRHILTVFRVTNILTLPSHYILKRWTRNAKSGVILDEHTPDLLNGARESLTIRYNNLRHEALKYVDDGIRSPRVYDVAMSALQEAANKVARATKNDGRLVISNGTYKEDLRWNNEATTSYRDPQTSLQQSSSKDDHDRTIEKLTRQLDRAQRKCEVYRSNLLSILKDMEEQKLELSVKVQNIKLGMKD 789
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu05g00301 789 Coils Coil 734 761 - -
Adu05g00301 789 Pfam FAR1 DNA-binding domain 85 176 IPR004330 -
Adu05g00301 789 ProSiteProfiles Zinc finger SWIM-type profile. 577 613 IPR007527 GO:0008270
Adu05g00301 789 SMART 26again6 588 615 IPR006564 GO:0008270
Adu05g00301 789 MobiDBLite consensus disorder prediction 715 731 - -
Adu05g00301 789 Pfam MULE transposase domain 297 389 IPR018289 -
Adu05g00301 789 Pfam SWIM zinc finger 585 611 IPR007527 GO:0008270
Adu05g00301 789 MobiDBLite consensus disorder prediction 715 740 - -
Adu05g00301 789 PANTHER PROTEIN FAR1-RELATED SEQUENCE 5-LIKE 43 763 - -
Adu05g00301 789 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 43 763 IPR031052 GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu05g00301 Adu-Chr5 3183743 3187537 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Adu05g00301 MULE 1.4e-28 CL0219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu05g00301 - - gmx:100782414 1337.4