Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu05g00288 ATGTCAAAAGCAGTTGGAAGTGGATCGGACCCGAAATTGTTGAGCACACTGAGGAGACTGCCAGGGACTCCAAGAGAGTTCATGTTCCGGGAGCTCAAGATCGCCACCAACAATTTCCATGACAGCAACAAGCTTGGTCAAGGTATTATCAGCATCATTCGTAGATTTGTGTATTGTCTCAAATGCATAAGCAAAATGATAAGGCAAAGTGGGTCAGACAAGACGCTAGTGAACACATTGAGGAACCTCCCGGGAACCCCCAAAGAGTACAGGTTTGAGGATCTGAAGATGGCAACCAACAACTTCGATGATGTCAAGAACAAGCTAGGACAAGGTGGTTTTGGTGCTGTTTACAGAGGAACACTTCCTAAGGACAAGACCCAGGTGGCTGTCAAGAAGTTCTTGAGGGACAAGATCTCTAGCACACATGATTTCCTGGCTGAGCTCACCATCATCAATTCTCTTCGTCACAAGAACCTTGTCCGCTTACTTGGATGGTGCCACAAGAATGGGATACTACTTTTAGTATATGAATACATGCCTAATGGAAGCTTAGATCATCACCTTTTCTTCAAGGAAGAGACCAACAAAACCCCATTAAGTTGGCATCTAAGATACAAGATCATATCAGGGTTGGTTGCTGCTTTGAACTACCTACACAACGAATGCGATAAGAAAGTGATCCACAGAGATCTCAAGGCAAGTAACATCATGCTAGACTCTGACTTCAATGCACGCTTAGGCGATTTTGGTTTGGCTCGGGCAATTGAGAACGAGAAGACTTCTTATGCAAATTTGCAAGGTGTTCCTGGAACTATGGGCTACATTGCACCAGAGTGCTTATACATCGGAAAGGCCACGCGTGAATCCGACGTGTATGGATTCGGCGCAGTCTTGCTGGAGGTGGATACTAGAGGCAGTAGATCCAAGGCTAGAGATGAGTTTGAGGCTGAAGAAGCAGAGAGGGTATTGAAATTGGGGTTAGCATGCTCTCACCCCATTGCAAGTGAAAGGCCTAAGATGCAGACAATTGTTCAGATCATATCAGGGTCAGTTCCTGTGCCTTATGTTCCACCTTTTGTGTGGCCTGCCGCGGATCAAAGCGGCGCTTCCTCGGGTGATCCTTCTTCAAGTGAGCCTACAGCTGCAACTTTAGAGTACTCTCCCATTAACACAACCTTCTTTGCTCGTTAA 1194 0.4606 MSKAVGSGSDPKLLSTLRRLPGTPREFMFRELKIATNNFHDSNKLGQGIISIIRRFVYCLKCISKMIRQSGSDKTLVNTLRNLPGTPKEYRFEDLKMATNNFDDVKNKLGQGGFGAVYRGTLPKDKTQVAVKKFLRDKISSTHDFLAELTIINSLRHKNLVRLLGWCHKNGILLLVYEYMPNGSLDHHLFFKEETNKTPLSWHLRYKIISGLVAALNYLHNECDKKVIHRDLKASNIMLDSDFNARLGDFGLARAIENEKTSYANLQGVPGTMGYIAPECLYIGKATRESDVYGFGAVLLEVDTRGSRSKARDEFEAEEAERVLKLGLACSHPIASERPKMQTIVQIISGSVPVPYVPPFVWPAADQSGASSGDPSSSEPTAATLEYSPINTTFFAR 397
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu05g00288 397 PANTHER - 314 371 - -
Adu05g00288 397 PANTHER - 74 308 - -
Adu05g00288 397 PANTHER - 15 51 - -
Adu05g00288 397 ProSitePatterns Serine/Threonine protein kinases active-site signature. 227 239 IPR008271 GO:0004672|GO:0006468
Adu05g00288 397 Gene3D Transferase(Phosphotransferase) domain 1 180 352 - -
Adu05g00288 397 Pfam Protein kinase domain 106 310 IPR000719 GO:0004672|GO:0005524|GO:0006468
Adu05g00288 397 ProSiteProfiles Protein kinase domain profile. 103 397 IPR000719 GO:0004672|GO:0005524|GO:0006468
Adu05g00288 397 PANTHER OS02G0712700 PROTEIN 15 51 - -
Adu05g00288 397 SMART serkin_6 103 395 IPR000719 GO:0004672|GO:0005524|GO:0006468
Adu05g00288 397 PANTHER OS02G0712700 PROTEIN 314 371 - -
Adu05g00288 397 PANTHER OS02G0712700 PROTEIN 74 308 - -
Adu05g00288 397 ProSitePatterns Protein kinases ATP-binding region signature. 109 133 IPR017441 GO:0005524
Adu05g00288 397 Gene3D Phosphorylase Kinase; domain 1 87 179 - -
Adu05g00288 397 SUPERFAMILY Protein kinase-like (PK-like) 88 369 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu05g00288 Adu-Chr5 3058458 3060566 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu05g00288 87 358 Receptor kinase-like Gene Family AT5G10530 44.262 4.01e-81 259
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Adu05g00288 Pkinase 3.3e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu05g00288 - - aip:107639957 586.645