Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu05g00272 ATGCCACAAAACTGCATAGCACCAAAACCAGAATACAACACTAGTAGTAATAGTAGTAGTAGTACTCATCATCACTCTATGGAAGCAGCCTTAGAGAATAATAATACCAATGAACAACAATCCATACAGAAACTCACTATGTTCCCCATAACTTTGAAGTTTGAGGAATTGGTGTACAAAGTGAAACTAGAACAGAAAGGAGGATGTTGGGGAAGCAACAAATGGAGCTGCAAAGAGAAAACAATTCTGAATGGAATCAGTGGTTGTGTTTGCCCTGGTGAGATTCTTGCCATGCTTGGCCCTTCAGGGAGTGGCAAAACCACACTCCTTACAGCTCTCGGAGGCCGTCTCACCGGAAAACTCTCCGGCAAGATAACATACAACAACAATCCATTCTCAGGTTCAATCAAGAGAAGAACAGGTTTTGTAGCACAAGATGATGTTCTATATCCTCACCTAACTGTAACTGAAACACTATTCTTCACTGCACTTCTGAGGCTTCCAAAGACTTTAACAAGAGATGAGAAGGTTCATCATGTTGAGAGAGTGATCAGTGAATTGGGATTAACAAGGTGTAGGAGCAGCATGATTGGAGGACCTTTGTTCAGAGGAATTTCTGGTGGAGAAAAGAAGAGAGTTAGTATTGGACAAGAAATGCTTATTAATCCTAGCTTGTTGCTTCTTGATGAGCCTACTTCTGGTTTGGATTCCACAACTGCTCAGAGGATCTTGAACACTATTAAGAGACTCGCCGGCGGCGGAAGAACCGTTATAACCACCATTCACCAGCCATCTAGCAGGCTATACTACATGTTTGACAAGGTTGTGTTGCTCTCTGAAGGCTCTCCTATTTACTATGGTCCTGCTTCCACTGCTTTGGACTATTTCTCTTCACTTGGATTCTCTACTTCTGTCACTGTTAATCCTTCTGATCTCTTGCTTGATCTTGCCAATGCTTATGATAAGAACATAGCAACAAATCTGAAAGCTGAGCTGTGCAGTGTTGAGGTGAACAACTACAACAACATGATGATCAAAGATGCATGTGCAAGGAATCAGATCAATCAGGAGCAATGGTGCACAAGTTGGTGGCATCAGTTTAAAGTACTATTGCAGAGGGGAGTGAGGGAGAGAAGGTTTGAAGCATTCAATAGGCTGAGAATATTCCAAGTCATAAGTGTTGCTTTTCTTGGTGGACTCTTGTGGTGGCATACCCCAGAATCACACATTGAAGATCGGGTAGCATTGCTGTTTTTCTTCTCAGTTTTCTGGGGATTCTACCCTCTATACAATGCAGTATTCACATTCCCACAAGAGAGGAGAATGCTGATAAAGGAAAGATCTTCAGGAATGTACAGGCTGTCTTCCTACTTCTTAGCAAGAACAATAGGAGACTTGCCATTGGAGCTTGCACTTCCAACTGCATTTGTGTTCATAATCTATTGGATGGGAGGACTCAAACCTGATCCTGTTACATTCATCCTTTCTCTTCTTGTTGTTCTCTACAGTGTCCTTGTTTCTCAAAGCTTAGGCTTAGCATTTGGTGCTATATTAATGGAGATCAAACAAGCAACCACTCTAGCTTCTGTCACAACCCTTGTGTTCCTCATTGCTGGTGGATACTATGTTCAACAGATTCCACCTTTTATAGTGTGGCTAAAGTACTTGAGCTATAGCTACTACTGTTACAAGCTTCTTCTTGGTGTTCAATACACTCAAGATGATTACTATGAATGCTCAAAGGGTGTGATGTGCAAGGTTGCTGATTTTCCACCAATCAAATCAATGGGATTGAATCATCTTTGGGTTGATGTTTGCATTATGGCACTTATGTTGGTTGGTTATAGACTAATTGCTTATTTAGCACTCAATAGAGTAAGGTAG 1884 0.4145 MPQNCIAPKPEYNTSSNSSSSTHHHSMEAALENNNTNEQQSIQKLTMFPITLKFEELVYKVKLEQKGGCWGSNKWSCKEKTILNGISGCVCPGEILAMLGPSGSGKTTLLTALGGRLTGKLSGKITYNNNPFSGSIKRRTGFVAQDDVLYPHLTVTETLFFTALLRLPKTLTRDEKVHHVERVISELGLTRCRSSMIGGPLFRGISGGEKKRVSIGQEMLINPSLLLLDEPTSGLDSTTAQRILNTIKRLAGGGRTVITTIHQPSSRLYYMFDKVVLLSEGSPIYYGPASTALDYFSSLGFSTSVTVNPSDLLLDLANAYDKNIATNLKAELCSVEVNNYNNMMIKDACARNQINQEQWCTSWWHQFKVLLQRGVRERRFEAFNRLRIFQVISVAFLGGLLWWHTPESHIEDRVALLFFFSVFWGFYPLYNAVFTFPQERRMLIKERSSGMYRLSSYFLARTIGDLPLELALPTAFVFIIYWMGGLKPDPVTFILSLLVVLYSVLVSQSLGLAFGAILMEIKQATTLASVTTLVFLIAGGYYVQQIPPFIVWLKYLSYSYYCYKLLLGVQYTQDDYYECSKGVMCKVADFPPIKSMGLNHLWVDVCIMALMLVGYRLIAYLALNRVR 627
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu05g00272 627 PANTHER ABC TRANSPORTER G FAMILY MEMBER 28 16 319 - -
Adu05g00272 627 PANTHER ABC TRANSPORTER G FAMILY MEMBER 28 317 625 - -
Adu05g00272 627 PANTHER ABC TRANSPORTER, G1, P-LOOP CONTAINING NUCLEOSIDE TRIPHOSPHATE HYDROLASE-RELATED 16 319 - -
Adu05g00272 627 PANTHER ABC TRANSPORTER, G1, P-LOOP CONTAINING NUCLEOSIDE TRIPHOSPHATE HYDROLASE-RELATED 317 625 - -
Adu05g00272 627 CDD ABCG_EPDR 49 287 - -
Adu05g00272 627 SMART AAA_5 92 282 IPR003593 -
Adu05g00272 627 ProSitePatterns ABC transporters family signature. 205 219 IPR017871 GO:0005524
Adu05g00272 627 Pfam ABC-2 type transporter 366 571 IPR013525 GO:0016020|GO:0140359
Adu05g00272 627 Pfam ABC transporter 83 233 IPR003439 GO:0005524
Adu05g00272 627 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 52 305 IPR003439 GO:0005524
Adu05g00272 627 MobiDBLite consensus disorder prediction 1 26 - -
Adu05g00272 627 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 77 298 IPR027417 -
Adu05g00272 627 Gene3D - 73 299 IPR027417 -
Adu05g00272 627 MobiDBLite consensus disorder prediction 8 26 - -
Adu05g00272 627 Pfam ABC-2 type transporter 262 320 IPR043926 GO:0140359
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu05g00272 Adu-Chr5 2893108 2895766 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu05g00272 82 282 Calmodulin-binding Proteins AT2G36910 29.717 4.72e-12 67.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu05g00272 K05681 - gmx:100794774 1050.43