Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu05g00249 ATGAAGACCATCAACGACGATGCTTCCGCACAAGATCTCGACCCTCAAAGCGACCACAGCTCCGATTACCTTCTTACTTCTAACCCACAGCCCCGCCGTCCCCGCGGCTTCGCTGCAGCCGCCGCCAATCCTGCCGGAAAGGGGAAGAAAGAGAGGGAGAAGGAGAAGGAGCGGACTAAGCTCCGCGAGCGTCACCGCCGTGCCATCACTAGCCGTATGCTTGCCGGTCTCCGGCAGTACGGGAACTTCCCTCTCCCGGCGCGTGCTGACATGAACGACGTACTCGCTGCACTCGCGCGTGACGCCGGTTGGGTTGTTGAAGCTGATGGCACCACCTACCGGCAATGTCCTCCACCTTCTCACGTGGGATCTTTTGCAGCTAGGTCAGTTGAAAGTCAACTCTCTGGTGGTTCCTTGAGACCTTGCTCTGTTAAAGAGACACTAGGGAATCAGCCACCGGCACTTAGAATTGATGAATGCTTGTCGCCTGCGTCGATAGATTCTGTGGTAATTGCAGAAAGGGACTCGAAGAACGAGAAATACACAAGTGCAAGCCCTGTAAATGTAGTCCACTGTTTGGAGGCCGATCAGCTCATACATGATATCCATTCTGGTGTGCACGAGAATGACTTTACCTGCACACCATATGTTCCGGTTTACTCAAAGCTACCAGCTGGTATTATTAACAAATTTTGCCAGTTGATTGACCCTGAAGGCATTAGACAGGAGCTAATCCATCTTAAGTCTTTAAATATGGATGGCGTCATTGTGGATTGTTGGTGGGGTATTGTTGAAGGCTGGAATCCGCAGAAATATGTGTGGTCTGGCTATAGGGATCTTTTTAGCATTATTAGAGAATTTAAGCTGAAGTTACAGGTTGTTATGGCATTTCATGAATGTGGAGGGAATGGTTCTAGTGATGCATTGATTGCCCTGCCACAATGGGTTTTGGATATGGGAAAAGATAACCCGGATATATTCTTTACAGATCGTGAAGGGCGGAGGAATACTGAATGCCTTTCCTGGGGAATTGACAAAGAGCGTGTTCTGAAAGGAAGAACTGGAATTGAGGTCTATTTTGATATGATGAGAAGCTTCAGGACAGAGTTTGATGACCTGTTTGCAGAAGGTCTGATTTCTGCAGTAGAAATTGGACTTGGTGCATCTGGGGAGCTGAAATACCCTTCTTTTTCAGAAAGGATGGGATGGAGGTATCCTGGAATAGGCGAGTTTCAGTGCTATGATAAATACCTGCAACATAGTCTGCGCATGGCAGCCAAATTACGTGGTCGTTCTTTCTGGGCTAGAGGACCTGATAATGCTGGACACTACAACTCTATGCCACATGAAACTGGATTCTTTTGTGAACGAGGTTCCTGCTGTATACTGGTGGTATAA 1398 0.4814 MKTINDDASAQDLDPQSDHSSDYLLTSNPQPRRPRGFAAAAANPAGKGKKEREKEKERTKLRERHRRAITSRMLAGLRQYGNFPLPARADMNDVLAALARDAGWVVEADGTTYRQCPPPSHVGSFAARSVESQLSGGSLRPCSVKETLGNQPPALRIDECLSPASIDSVVIAERDSKNEKYTSASPVNVVHCLEADQLIHDIHSGVHENDFTCTPYVPVYSKLPAGIINKFCQLIDPEGIRQELIHLKSLNMDGVIVDCWWGIVEGWNPQKYVWSGYRDLFSIIREFKLKLQVVMAFHECGGNGSSDALIALPQWVLDMGKDNPDIFFTDREGRRNTECLSWGIDKERVLKGRTGIEVYFDMMRSFRTEFDDLFAEGLISAVEIGLGASGELKYPSFSERMGWRYPGIGEFQCYDKYLQHSLRMAAKLRGRSFWARGPDNAGHYNSMPHETGFFCERGSCCILVV 465
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu05g00249 465 PRINTS Beta-amylase (glycosyl hydrolase family 14) signature 272 290 IPR001554 GO:0000272|GO:0016161
Adu05g00249 465 PRINTS Beta-amylase (glycosyl hydrolase family 14) signature 387 409 IPR001554 GO:0000272|GO:0016161
Adu05g00249 465 PRINTS Beta-amylase (glycosyl hydrolase family 14) signature 294 315 IPR001554 GO:0000272|GO:0016161
Adu05g00249 465 PRINTS Beta-amylase (glycosyl hydrolase family 14) signature 251 265 IPR001554 GO:0000272|GO:0016161
Adu05g00249 465 Pfam BES1/BZR1 plant transcription factor, N-terminal 46 193 IPR008540 -
Adu05g00249 465 Pfam Glycosyl hydrolase family 14 236 427 IPR001554 GO:0000272|GO:0016161
Adu05g00249 465 MobiDBLite consensus disorder prediction 46 63 - -
Adu05g00249 465 MobiDBLite consensus disorder prediction 1 63 - -
Adu05g00249 465 PANTHER - 51 458 IPR001554 GO:0000272|GO:0016161
Adu05g00249 465 SUPERFAMILY (Trans)glycosidases 211 459 IPR017853 -
Adu05g00249 465 Gene3D Glycosidases 207 461 - -
Adu05g00249 465 PANTHER BETA-AMYLASE 8 51 458 - -
Adu05g00249 465 MobiDBLite consensus disorder prediction 1 28 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu05g00249 Adu-Chr5 2582431 2587150 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu05g00249 59 458 Glycoside Hydrolase AT5G45300 72.319 0.0 610
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF BES1 Adu05g00249 Glyco_hydro_14 1.9e-51 CL0058
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu05g00249 K01177 - gmx:100777004 806.979
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu05g00249 05 2582431 2587150 Adu05g00249 05 2582431 2587150 ECH