Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu05g00248 ATGAAGCCTGTCTCTCTTGTCTTCTCCACATTATTTTGGTACGAATACATTATTCACTTCTTTCTTATTACCACTCTGAACTCATCACTACTGTGGTTTATCTCAAACACTAGTAGTAGTAGTAGTAGTGCACATGCATTGTTGCTAGGAAATGAGAGTGATCATCTGGCTTTGCTCAAGTTCAAGGATTCAATATCCAAGGACCCTTTTGGAGTCTTGGATTCTTGGAATACCACAAACCACTTTTGCAAGTGGCAAGGAATCACATGCAATAATAGTCCCAAGCAACAAAGAGTTATTGAATTGAGATTACCAGGATATTATCTGCATGGATCTCTGTCTCCTCAACTCAGTAATCTCTCTTTTCTGAGGCACATAGACCTCGAAAACAACAGCTTCTATGGAGATATTCCCCAAGAGCTTGGTCTCTTGTCACACCTGCAGGTACTTTATCTTGATAACAATTCTCTGACTGGTGAAATTCCTATAAACTTGACCAGTTGTTCTGAACTCACAAACTTTGACTTCTCATGGAACAATTTGATTGGTAACATACCAATTGGAATTGGATCTCTTTCCAAGCTCAAAGAATTTTTCATTGAGAGAAATAATTTAAGTGGAAGAATCCCACCATCCATAGGTAATCTTACATCCCTCACTTCCCTAGTGTTGATTTCTAATGACTTGGAGGGGAATATTCCACAACAATTATGTGCCTTGCAAAACTTAACATATTTATTACTCGATTCGAACGAATTTTCCAGTACACTTCCATCTTGTCTTTACAATATATCATCTCTTAGTGTGTTATCAGTTTCAAACAATAATATTAGTGGCTCTTTGCCGGCCAACATTTTCCACAACCTCCCAAATCTTCAATTTTTCCAAATTGGAACAAACAATTTCTCTGGAAAAATTCCACTTTCTGTCACAAATGCATCTTTACTACAAGTACTTGATTTGGATCGAAACCATTTTGTGGGACAAGTTCCAAGCCTAGGGAAGCTAACAAAACTTCGATTTCTGTCTGTATCTGAGAACAATCTAGGTGGATTTCCAACTAAGGATTTGAAGTTCTTGAAGCCTTTGGCCAACTGTAGTAACTTGTACGTGCTTGGCATATCTGTCAATAACTTTGGAGGCCAGTTGCCAAATTACATTGGTAATTTGTCTACACACTTGAGCAATCTCTTTCTTGGTTATAACCAAATATATGGAAAAATTCCTGCGGAGTTAGGAAATTTGGTTAACTTAACTCTCTTGAACATGCAAGGCTGCCGTTTTGATGGGAATATTCCAGCTACTTTTGGACAGTTTCAAAAGATGGAAGTATTAGAGTTGAGTGGAAACAAGTTTTCAGGAGAGATGCCAGCCTTTATAGGCAACCTCAGCAAGTTATTTCTCTTGGATTTGTCAGACAATATGTTTGAAGGAAGCATTCCTTCAAGTATAGGAAACTGCCAGAACTTACAACATCTTAATTTTTCCAAGAACAATCTCAGCAGAACCATACCATCTGAGATTTTCAGCATTTCTTCCTTAACAATCTTATTAGACTTGTCACAAAACTCATTCAGTGGCAATCTATCTGATGAAGTGGGAAAGCTACAAAATCTCAATTTCCTGAAAGTCTCTGAGAATAATCTAGTTGGCAACATTCCTGCCAGCATTGCAGAGTGTCTAAGTTTGGAGTTCCTTTATTTGCAAGGGAATTCATTCTCCGGAGCCATACCATCCTCTTTGGTTTCGCTTAAAGGTCTCCGAAAATTAGACATATCACGAAACCATTTGTCAGGGTCGATTCCTGAAGGATTGCAGAACCTTTCACTTGAGTATCTCAATATCTCTTTCAACATGTTAGATGGAAAAGTGCCGACAGGAGGAGTTTTCAAAAATGTGAGTGAGTTTGCAATGATTGGAAACAATAAGCTTTGTGGGGGTGTTTCAGAGCTTCATTTGCCACCATGCCCTTCTGAAGCTAAGAAACCAAAGAGACACCACAATTTCAAGTTGGTTGTAGTGATAGTTTGTGTGTGTGCTTTTTTCTTCTTCTTATCCCTTCTCCTAACCATTTGCTGGATGAGGAAGAGAAGCAAGAAAATGTCTTCTGATGATTCACCAACAATAGACCAGCTGGCTAAGGTTTCCTATCAAAGCCTACACAATGGAACCAATGGATTCTCAGAAGAAAATTTGATAGGGTCTGGAAGTTTTGGTTCTGTGTATAAGGGAACTCTTGAGTTAGAAGAAAGTGGTGTTTTTGTTGCCATTAAGGTCCTAAAGCTTCAAACCAAAGGTGCTGAGAAGAGTTTTGTTGCTGAATGTAATGCACTCAAGAGTGTGAGGCATCGCAATCTGGTGAAGATTTTAACATGTTGCTCAGGTACAGATTATAAAGGGCAAGAATTCAAGGCTCTAGTTTTTGAGTTCATGACAAATGGAAGCCTAGAAAGTTGGTTACATCCATCAACAGAAATTGCAAATCAAACTGCTGCTAGATCACTGAACCTTGAGCAAAGGTTTAACATCATCAATGATGTTGCCTCAGCATTTCATTATCTTCACTATGAATGCGATCGAGCTATTATTCATCGAGATTTAAAGCCAAGCAATGTTCTTCTCGATGATTTGATGGTAGCTCATGTGGGTGATTTTGGCTTAGCAAGACTACTTGAGAAGAATATTGGAGACTCTTCTATGCAAACTACCTCAACTGGACTGAAAGGAACTTTTGGTTATGCTCCTCCAGAGTATGGAATGGGTTATCAAGTGTCTATGGAAGGAGATATGTATAGCTTTGGGATTCTGATATTAGAAATGTTGACTGGAAAGAGGCCCACGGATGAAATGTTCATGGACGGTCACAATCTCCATAAATATGTTGAAGTTTCAATTTCAAGTAACATTTTCAAGATTGTGGACCCTTGTATCCTTTCCATGGAAGAACAATTACAGCCTGGGGTTGAAAATTGTTTAATTTCACTGTTTAAAGTTGGACTGGCTTGTTCAATGGAATCACCAAATGAAAGAATGGCTATAGTTGATTTAATGAGAGAGCTTAATCGAATCAAATGTTGTTTTCCTTCGTAA 3090 0.3832 MKPVSLVFSTLFWYEYIIHFFLITTLNSSLLWFISNTSSSSSSAHALLLGNESDHLALLKFKDSISKDPFGVLDSWNTTNHFCKWQGITCNNSPKQQRVIELRLPGYYLHGSLSPQLSNLSFLRHIDLENNSFYGDIPQELGLLSHLQVLYLDNNSLTGEIPINLTSCSELTNFDFSWNNLIGNIPIGIGSLSKLKEFFIERNNLSGRIPPSIGNLTSLTSLVLISNDLEGNIPQQLCALQNLTYLLLDSNEFSSTLPSCLYNISSLSVLSVSNNNISGSLPANIFHNLPNLQFFQIGTNNFSGKIPLSVTNASLLQVLDLDRNHFVGQVPSLGKLTKLRFLSVSENNLGGFPTKDLKFLKPLANCSNLYVLGISVNNFGGQLPNYIGNLSTHLSNLFLGYNQIYGKIPAELGNLVNLTLLNMQGCRFDGNIPATFGQFQKMEVLELSGNKFSGEMPAFIGNLSKLFLLDLSDNMFEGSIPSSIGNCQNLQHLNFSKNNLSRTIPSEIFSISSLTILLDLSQNSFSGNLSDEVGKLQNLNFLKVSENNLVGNIPASIAECLSLEFLYLQGNSFSGAIPSSLVSLKGLRKLDISRNHLSGSIPEGLQNLSLEYLNISFNMLDGKVPTGGVFKNVSEFAMIGNNKLCGGVSELHLPPCPSEAKKPKRHHNFKLVVVIVCVCAFFFFLSLLLTICWMRKRSKKMSSDDSPTIDQLAKVSYQSLHNGTNGFSEENLIGSGSFGSVYKGTLELEESGVFVAIKVLKLQTKGAEKSFVAECNALKSVRHRNLVKILTCCSGTDYKGQEFKALVFEFMTNGSLESWLHPSTEIANQTAARSLNLEQRFNIINDVASAFHYLHYECDRAIIHRDLKPSNVLLDDLMVAHVGDFGLARLLEKNIGDSSMQTTSTGLKGTFGYAPPEYGMGYQVSMEGDMYSFGILILEMLTGKRPTDEMFMDGHNLHKYVEVSISSNIFKIVDPCILSMEEQLQPGVENCLISLFKVGLACSMESPNERMAIVDLMRELNRIKCCFPS 1029
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu05g00248 1029 Gene3D Ribonuclease Inhibitor 50 203 IPR032675 -
Adu05g00248 1029 Gene3D Ribonuclease Inhibitor 204 292 IPR032675 -
Adu05g00248 1029 ProSitePatterns Protein kinases ATP-binding region signature. 733 758 IPR017441 GO:0005524
Adu05g00248 1029 PANTHER LRR RECEPTOR-LIKE KINASE 39 1028 - -
Adu05g00248 1029 Gene3D Transferase(Phosphotransferase) domain 1 811 1026 - -
Adu05g00248 1029 Pfam Leucine rich repeat N-terminal domain 52 91 IPR013210 -
Adu05g00248 1029 SUPERFAMILY L domain-like 392 646 - -
Adu05g00248 1029 ProSitePatterns Serine/Threonine protein kinases active-site signature. 862 874 IPR008271 GO:0004672|GO:0006468
Adu05g00248 1029 Pfam Leucine rich repeat 566 620 IPR001611 GO:0005515
Adu05g00248 1029 Gene3D Ribonuclease Inhibitor 293 356 IPR032675 -
Adu05g00248 1029 PANTHER OS04G0122200 PROTEIN 39 1028 - -
Adu05g00248 1029 Gene3D Phosphorylase Kinase; domain 1 708 810 - -
Adu05g00248 1029 ProSiteProfiles Protein kinase domain profile. 727 1023 IPR000719 GO:0004672|GO:0005524|GO:0006468
Adu05g00248 1029 SUPERFAMILY L domain-like 52 349 - -
Adu05g00248 1029 Pfam Protein tyrosine and serine/threonine kinase 730 960 IPR001245 GO:0004672|GO:0006468
Adu05g00248 1029 Gene3D Ribonuclease Inhibitor 357 665 IPR032675 -
Adu05g00248 1029 SUPERFAMILY Protein kinase-like (PK-like) 708 1020 IPR011009 -
Adu05g00248 1029 SMART serkin_6 727 1023 IPR000719 GO:0004672|GO:0005524|GO:0006468
Adu05g00248 1029 SMART LRR_typ_2 336 359 IPR003591 -
Adu05g00248 1029 SMART LRR_typ_2 144 168 IPR003591 -
Adu05g00248 1029 SMART LRR_typ_2 264 288 IPR003591 -
Adu05g00248 1029 SMART LRR_typ_2 463 487 IPR003591 -
Adu05g00248 1029 SMART LRR_typ_2 240 263 IPR003591 -
Adu05g00248 1029 SMART LRR_typ_2 192 216 IPR003591 -
Adu05g00248 1029 SMART LRR_typ_2 488 511 IPR003591 -
Adu05g00248 1029 SMART LRR_typ_2 536 560 IPR003591 -
Adu05g00248 1029 SMART LRR_typ_2 584 607 IPR003591 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu05g00248 Adu-Chr5 2549236 2581739 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu05g00248 51 1027 Receptor kinase-like Gene Family AT3G47570 45.436 0.0 807
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XII-1 Adu05g00248 PK_Tyr_Ser-Thr 1.3e-40 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu05g00248 - - gmx:100792724 1211.05