Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu05g00229 ATGTTCGCTGGCGAGGACGCCCGAGCGGCTCGCCTGGCCATGGTGGCGCCGCCGCAGCCGCAGATGTTGAACCCGGCGACATCGTCGGTGATTTCCGGCGAGATATCGCCGACGACGGCAGGGAGAGAGGAGAGGGTTCCGGCACAGCCGCAGTGGAGCCAGCAGGAGACGAGAGAGTTCATAGCGATACGCGCGGAGCTTGAGAGGGACTTCACTGCATCGAAGCGGAACAAGACGCTTTGGGAGGTTGTGAGCTCCAAGATGAGGGAGAGAGGCTTCAGGAGGAGCCCCGAACAGTGCAAATGCAAGTGGAAGAACCTCGTTAATCGCTATAAGGGAAAAGAGACATCTGATCCAGAGCATAGTAGGCAATGTCCATTTTTCGAAGAATTGCATGCAGTATTTACTGAAAGAGCACGAAATATGCAACGACTGCTTCTTGAATCTGAGGCTCGTTCAGCTCAAACAAAGAAAGGGGTGAAAAGGTCAAGTGGAGAACGGTCCTCGGAAGAGTACTCTGAAGATGACGAGGAGGTAGAAGATGACAGTGAAGAGGAGAAGCCTTCTAGAAGCAATGCTCGTAAAAGGAAAGTTGACAAAACTGATAAGTCTTCAAAGGCAAACAATCCATCAAATACTTTCAGTAACACAATGGAGAAACTTGAAAGGGAGAGATTAATGATTGAACAGACATGGAGGGAGCGGGAAGAACAGAGGAGAATGAGGGAAGAGAGCCGGGCAGAGAGGAGGGATGCTTTGTTGACAACTCTTTTGAACAAACTCATACATGAATCTAACTAA 801 0.5019 MFAGEDARAARLAMVAPPQPQMLNPATSSVISGEISPTTAGREERVPAQPQWSQQETREFIAIRAELERDFTASKRNKTLWEVVSSKMRERGFRRSPEQCKCKWKNLVNRYKGKETSDPEHSRQCPFFEELHAVFTERARNMQRLLLESEARSAQTKKGVKRSSGERSSEEYSEDDEEVEDDSEEEKPSRSNARKRKVDKTDKSSKANNPSNTFSNTMEKLERERLMIEQTWREREEQRRMREESRAERRDALLTTLLNKLIHESN 266
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu05g00229 266 Pfam Myb/SANT-like DNA-binding domain 50 133 IPR044822 -
Adu05g00229 266 Gene3D - 52 113 - -
Adu05g00229 266 SMART sant 48 110 IPR001005 -
Adu05g00229 266 MobiDBLite consensus disorder prediction 19 54 - -
Adu05g00229 266 ProSiteProfiles Myb-like domain profile. 52 108 IPR001005 -
Adu05g00229 266 MobiDBLite consensus disorder prediction 154 169 - -
Adu05g00229 266 MobiDBLite consensus disorder prediction 21 36 - -
Adu05g00229 266 CDD GT1 50 115 - -
Adu05g00229 266 PANTHER - 41 205 - -
Adu05g00229 266 PANTHER - 214 264 - -
Adu05g00229 266 MobiDBLite consensus disorder prediction 170 184 - -
Adu05g00229 266 PANTHER - 41 205 - -
Adu05g00229 266 PANTHER - 214 264 - -
Adu05g00229 266 MobiDBLite consensus disorder prediction 185 204 - -
Adu05g00229 266 MobiDBLite consensus disorder prediction 148 225 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu05g00229 Adu-Chr5 2416247 2418227 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu05g00229 50 261 Trihelix Transcription Factor Family AT2G38250 39.526 5.17e-38 133
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Adu05g00229 Myb_DNA-bind_4 4.1e-22 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu05g00229 - - adu:107486987 454.521
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu05g00229 05 2416247 2418227 Adu05g00229 05 2416247 2418227 ECH