Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu05g00220 ATGTCTCTTCTCAGCAGATTCTTCTACAAGCGTCCCCCTGATGGATTACTCGAATTCATCGACCGAGTCTACGTTTTCGATTCGTGTTTTTCCACCGAAGTGTTGCCCGAAGGAATGTACCAGCTGCACCTCCACGAGATCATCACGGAGCTCCATGAGGAGTTTCCAGAATCTTCTTTCCTCGCATTCAACTTCCGCGACGGCGAGAGGCGCAGCCAATTCGCTGAATTTCTCACAGAATACGATGTTGTCGTCATGGATTACCCAAAGCAGTACGAGGGTGTTCCAATTTTGCCCCTTTCTCTTGTTCAGCACTTTCTTAGAGTCTGTGATAGTTGGTTAAACTTAGGGAACCATCAAAATGTGATTTTGTTTCACTGTGAAAGAGGGGGCTGGCCCCTACTTGCATTTCTACTAGCTAGTTTACTTGTCTTTAGGAAAGTTCATAGTGGTGAAAAAAGGGCGCTTGAGATGGTTCATAGGGAGGCACCAAAGGGTTTGTTGCAGCTTTTGTCGCCTTTGAACCCTTTGCCCTCTCAGCTTCGATACATTCAGTATGTGGCGAGGCGGAATATTTCACCGGGGTGGCCACCTCCGGAGCGAGCACTGTCGCTGGATTGTCTCATTTTGAGGGCAATTCCTGGCTTTGATTTGCAGAATGGGTGTAGGCCGATGATTAGGATATTTGGTAGGAACTTGCTCAGCAAGGATGGGCTTTCCACTCAGATGATATATTCAATGCATAAGAAGAAGAAGAGCTTGCGGCATTACCGCCAGGCAGACTGCGATGTGATTAAGATTGATATTCAGTGTTTAGTTCAAGGAGATGTGGTGTTAGAGTGCGTTCATTTGGATTTGGATCCAGAAAGGGAGGTGATGATGTTTCGTGTAATGTTTAATACGGCATTTATTCGGTCCAACATATTGATGCTGAATGCTGATAACTTGGACATTCTTTGGGATTCAAAGGATCGGTATCCAAAAGGCTTCAGGGCTGAGGTTTTGTTTGGAGAGGTAGAAAATGTAAGTCCTCAACGGGCTCCCACAACCATGCTAAATGGTGAGGAGAAAGGTGGATTGCCCATTGAAGCGTTTTCACGGGTTCAAGAACTGTTTAGTGGCGTAGATTGGGTTGATAGTGGTGATGCTGCTGCTGTCTGGCTTCTTAAACAATTAACTGTCCTAAATGATGTCAAAGAGTTTTCAAGATTGCAAGGAAAAGGAAGTTGGTATTCATCGCCTGCTGACTCCGACGAGGAAAATAATGAATCAAGCACTGCTGATAGTTCGGATGAGGCCTTTGATGTTCCCAGGTTGTCTTCTGATACTCCAAAATTATTGACACCTGACATCCCTGATTCAATCCATTTAGCTTTTGAGAATCATGGTGGTAATCATGAAAATCGCGATTCAGCAACACCTGATCAGTCATTGACAGATAATGGACCCTCAATTTGTCATGTTCCAAGCAATGAATATTCTCCTTGTTCATCTCCATCATCACCTAACTTCAGCCCCACCACCACCACCACCTCCTCCACTCCTCCAATATCTGCAAGGACAGGTTCTGCTCCGCCAACTCCACCTCCACCTCCTCCAATACCTGCAAGAACAGGTTCAGCACCACCACCTCCACCTCCAATACCTGCAAAAACAGGTTCAGCACCACCACCTCCACCTCCACCACCCCAACTACCTGCAAGAGTAGGTTCTGCCCCACCACCTCAACCTCCACCTCCTCCAGCACCAATAAGAACAGGTTCATCCCCATCGCCTCCGCCTCCACCTCCTCCACTGCCTACAAGAACAGGTTCTGCCCCACCACCTCCACCCCCTCTACCACCTGTAAGAGCAATTACTGCCCCACCTGCTCCACCTCCTCCTCCTCCTTCAGCACCTACACCTAGACGAGCAGGTTCAACCCCACCAGCTCCACCTCCACCTCCACCACCTCCAGGACGAGCAAGTTCAACTCCACTACCTGCTCCTCCCCCTCCGCCAGGACCTGTGCGAACAAGTTTAACATCAGCCCCACCACCGCCACCTCCACCCCCTCCAGGGTCTGTACGAAAAGGTCCTGGTCCACCACCTCCACCTCCACCTCCAGGTGTTCGAACAGTTTCAGCCCCACCAGCTGCACCAAAGCCTCCAAATGCTCCTCCTCCCCCAATTGGTCGTAGTGGAACACCTGTACCTCCTCCACCTCCTGCAGGCAGGGCCTCTAGTGTGCCACCACCACCTGGCAAAGGTTCTTTAGCACCAGCAAGTCTTGGAAGAGGCCGAGGTACTGGTGCAACTGTTAATGCACCTAAGAAAACTATGTTGAAGCCCCTTCATTGGGTGAAAGTTGCCCGAGCAGCACAAGGGAGTTTATGGGCTGATTCACAAAAGCAAGATAATGAATCAAGGGCCCCTGAAATAGATATATCAGAACTTGAGAGCCTGTTTTCAGCAGCATCTGCTTCTGATGGGAGCAATGCTAAAGTTGGAGGTCGGCGCGGTTCTAATATCAACAAACCCGAGAAAGTACAACTGATTGACTTGCGTAGAGCATATAATTGTGAAATAATGCTCTCCAAAATCAAAATTCCTTTGCCAGATATGCTTAATGCTGTTCTAGCATTGGATTCTTCTGTTCTGGATATTGATCAGGTTGAGAATCTCATCAAATTCTGTCCCACCAAGGAAGAGATGGAGATGTTGAAGAATTATAAAGGGGACAAGGATATGCTTGGAAAATGTGAACAGTTTTTTATGGAGCTGATGAAGGTTCCACGAGTAGAATCCAAGTTAAGGGTGTTTGCTTTCAAAATCAACTTTTCTTCTCAGGTGAATGATTTGAGGAAAAATTTGAATACAATCAACAATGCTGCTAAAGAGGTGAAAGAATCTGTGAAATTACGCCAGATAATGCAGACTATTCTTACCTTGGGCAATGCCCTGAATCAGGGAACAGCAAGGGGATCAGCAGTTGGATTCAAATTGGATAGCCTTCTCAAGTTATCTGATACTCGTGCAAGAAATAACAAAATGACTTTGATGCATTATTTGTGCAAGCTTCTTGCTGAGAAAATGCCAGAATTGCTAGATTTTGACAAAGATCTTGTCCATTTGGAAGCAGCTTCAAAGATCCAACTGAAAGCATTGGCTGAAGAAATGCAAGCTGTGAGTAAAGGTTTGGAGAAGGTTGAGCAAGAACTCACTGCTTCTGAAAATGATGGTGCCATATCTACAGGATTTCGTAAGGTGTTGAAGAATTTTCTTGATACTGCTGAAGCCGACGTGAGGTCTCTCATATCATTGTATTCTGAAGTGGGAAGAAATGCAGATTCTTTGTCCCAGTACTTTGGGGAGGATCCAGCTAGGTGCCCTTTTGAGCAAGTTACACAAATCCTTGTTGTATTCATGAAAATGTTTAACAAGTCAAGGGAAGAGAATGAGAGGCTGGCAGAAGCTGAAAAGAAGAAATTAGAGAAAGAAGCCATGAAGGAAAAGGCAGCAGCAAATAACACAAACTCCAAAAAAGAAATGGTTAGATAG 3540 0.4621 MSLLSRFFYKRPPDGLLEFIDRVYVFDSCFSTEVLPEGMYQLHLHEIITELHEEFPESSFLAFNFRDGERRSQFAEFLTEYDVVVMDYPKQYEGVPILPLSLVQHFLRVCDSWLNLGNHQNVILFHCERGGWPLLAFLLASLLVFRKVHSGEKRALEMVHREAPKGLLQLLSPLNPLPSQLRYIQYVARRNISPGWPPPERALSLDCLILRAIPGFDLQNGCRPMIRIFGRNLLSKDGLSTQMIYSMHKKKKSLRHYRQADCDVIKIDIQCLVQGDVVLECVHLDLDPEREVMMFRVMFNTAFIRSNILMLNADNLDILWDSKDRYPKGFRAEVLFGEVENVSPQRAPTTMLNGEEKGGLPIEAFSRVQELFSGVDWVDSGDAAAVWLLKQLTVLNDVKEFSRLQGKGSWYSSPADSDEENNESSTADSSDEAFDVPRLSSDTPKLLTPDIPDSIHLAFENHGGNHENRDSATPDQSLTDNGPSICHVPSNEYSPCSSPSSPNFSPTTTTTSSTPPISARTGSAPPTPPPPPPIPARTGSAPPPPPPIPAKTGSAPPPPPPPPQLPARVGSAPPPQPPPPPAPIRTGSSPSPPPPPPPLPTRTGSAPPPPPPLPPVRAITAPPAPPPPPPSAPTPRRAGSTPPAPPPPPPPPGRASSTPLPAPPPPPGPVRTSLTSAPPPPPPPPPGSVRKGPGPPPPPPPPGVRTVSAPPAAPKPPNAPPPPIGRSGTPVPPPPPAGRASSVPPPPGKGSLAPASLGRGRGTGATVNAPKKTMLKPLHWVKVARAAQGSLWADSQKQDNESRAPEIDISELESLFSAASASDGSNAKVGGRRGSNINKPEKVQLIDLRRAYNCEIMLSKIKIPLPDMLNAVLALDSSVLDIDQVENLIKFCPTKEEMEMLKNYKGDKDMLGKCEQFFMELMKVPRVESKLRVFAFKINFSSQVNDLRKNLNTINNAAKEVKESVKLRQIMQTILTLGNALNQGTARGSAVGFKLDSLLKLSDTRARNNKMTLMHYLCKLLAEKMPELLDFDKDLVHLEAASKIQLKALAEEMQAVSKGLEKVEQELTASENDGAISTGFRKVLKNFLDTAEADVRSLISLYSEVGRNADSLSQYFGEDPARCPFEQVTQILVVFMKMFNKSREENERLAEAEKKKLEKEAMKEKAAANNTNSKKEMVR 1179
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu05g00220 1179 Coils Coil 1046 1073 - -
Adu05g00220 1179 MobiDBLite consensus disorder prediction 1146 1179 - -
Adu05g00220 1179 SMART it6_source 552 1177 IPR015425 -
Adu05g00220 1179 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 201 339 IPR035892 -
Adu05g00220 1179 Gene3D Protein tyrosine phosphatase superfamily 16 191 IPR029021 -
Adu05g00220 1179 MobiDBLite consensus disorder prediction 521 751 - -
Adu05g00220 1179 Coils Coil 1140 1174 - -
Adu05g00220 1179 MobiDBLite consensus disorder prediction 1146 1165 - -
Adu05g00220 1179 Pfam Formin Homology 2 Domain 770 1140 IPR015425 -
Adu05g00220 1179 PANTHER FORMIN-J 1 1174 - -
Adu05g00220 1179 Coils Coil 944 964 - -
Adu05g00220 1179 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 13 187 IPR029021 -
Adu05g00220 1179 MobiDBLite consensus disorder prediction 408 771 - -
Adu05g00220 1179 ProSiteProfiles Formin homology-2 (FH2) domain profile. 765 1165 IPR015425 -
Adu05g00220 1179 Gene3D Formin, FH2 domain 765 1150 IPR042201 -
Adu05g00220 1179 ProSiteProfiles C2 tensin-type domain profile. 200 339 IPR014020 -
Adu05g00220 1179 SUPERFAMILY Formin homology 2 domain (FH2 domain) 840 1167 - -
Adu05g00220 1179 MobiDBLite consensus disorder prediction 470 520 - -
Adu05g00220 1179 Gene3D - 197 342 - -
Adu05g00220 1179 SMART PTEN_C2_2 198 338 IPR014020 -
Adu05g00220 1179 Pfam C2 domain of PTEN tumour-suppressor protein 199 337 IPR014020 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu05g00220 Adu-Chr5 2325977 2333442 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu05g00220 1 435 FH2 protein (formin) Gene Family AT1G31810 77.931 0.0 756
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu05g00220 - - adu:107487096 987.638
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu05g00220 05 2325977 2333442 Adu05g00220 05 2325977 2333442 ECH