Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu05g00219 ATGGACTACGATTCAGATAACCCATCGCAAGATGGGAGGGATGAAGATGATGAAGAAGAATATGAGGAGTCTGGCAAGGATAGTGGTTTTTTAGCCCTCATGTTTGGAAATTTTGATAATTCGGGTGGTCTTGATGCTGATTACTTTGACGAGGATGCAAAGGAGCATATTCATGCATTGGCCGGAAAGTTGGATTCATCACTGACAGATATAGATTTGTCAGGAAAATCACCGCAAACACCACCTGATGTTGTTGAACAAGACTCTATCGAAAAGGCTGAAGATGCAGTTGATTATGAAGATATTGATGAGGAGTATGATGGCCCAGAGACTGAAGCTGCAAATGAAGAGGACTATTTACTCCCAAAAAAGGAATTTTTCGCTGCTGAAGCCTCCCTGGAAGCTCTAGGGTCTAGAACTTCTGTCTTTGATGATGAAAATTATGATGAAGAATCTGACAAGGAACAAGATGGAGTTGATGATTCTAAAGCTGTCTCTTTGGCTGGGGAGCAGGAAAAGAGTGTTGTAGATGCATCTAAAGAAGACAAAGACAGTGCGCTTGAACGTGATGTACAAGTTGGGTTGCAGCAGACTGAAGAATTGGCCTTCAAGGTAAAGACACTTGAGGAAGGGCCTGAAGTTCTGAAAAGGTCTACGCCGTTGCCAGTTTTGTATGTGGAAGATGGGATGGAAATTTTACGCTTCTCTGAAATCTTTGGTATTCATGAACCTCTGAGGAAAGGAGAAAGGAGAGAGCATCGGCATTCTGTTACACACGATAGATACAAATCATTGGATTTATCTGATGATATTGTAGAAGAGGATGAAGAGGCATTCCTCAAGGGATTCTCTAGTCTTTCACTGACCAAACAGGCTTGTGTAGTCCATAATGATGCATCAGAAAGTAATGATGTTGATTTGGAATTTCCAAAATTTGGATTTCTTCATGGGGATGCCTCAACACCTGCGAAAGATGATCGACAACAAAAGGACTCTTGTCTTAGTGCTGAACCAATGAAAGGCGATTTCACGAATGAGCTTCCATGGAAAGATACTTATGTCTTGTCAGCCAACTTTTATCCTCTTGATCAGCAAGATTGGGAAGATGAAATCATTTGGGGCAATTCTCCTGTTGTAAGTGACACTAATTTTGAGAGCTGTGAAATTTCGGGACCAGAGTTGGGAGCCTCTGGTGGTAGTGAAATAGAAATTGAAAGTGGGATACAGAATATACAGTTGGAGCCCCAGAAAATAATGGAGGAGAAAAAAATGTTTTACCAAGATGACCAAATGCACTTCGAAGTTTTGGATAACAAGAATAGTAGCCATCTTCACCTTCATGCTGGGGCTATGATTTTGACTCGTTCCTTAAAATCAAGCAGTGGGGATTCTGAGCTACCAGTACAGGGAGGTCAATATGGATGGCGATATGTTGCTAATGATAAACATTATTCAAACAGGAAAACTTCTCAGCAACTGAAGTCAAATTCTAAGAAACGCTCAGCGCATGGTGTCAAAATTTTCCACTCCCAACCTGCACTGAAGCTGCAGACAATGAAGTTGAAGTTGAGCAATAAAGATATTGCAAATTTTCACCGTCCTAAAGCATTATGGTATCCCCATGATAGTGAGGTTGTTGTCAGAGAACAGAGAAAACTGTCAACACAGGGACCCATGAAAATTATTATGAAGAGCTTGGGTGGCAAGGGGACAAAACTACATGTTGATGCTGAAGAAACTCTAGCTTCTGTTAAAGCAAAAGCTGCTAAAAAGCTAGATTTCAAGGGATCAGAAAACGTGAAAACATTTTATTTGGGGAGGGAGCTTGAGGATCAGAAATCACTTGCTGCACAGAACGTTCAATCAAATTCATTGTTACACCTTGTACGGACAAAGATTCACTTGTGGTCAAGGGCACAAAGGGTTCCTGGTGAGAATAAGTCACTGCGTCCTCCAGGGGCATTCAAGAAAAAGTCTGATCTGTCCGTGAAAGATGGCCATGTTTTTCTGATGGAGTATTGTGAGGAAAGGCCTTTACTTTTGGGCAATGCTGGAATGGGTGCAAGGCTTTGTACGTACTATCAAAAGTGTTCTCCAGATGATCAATCTGGCTCTTTATTACGCAACACTGATAATAGCTTGGGGCACATTATATCTCTCGATCCAGCTGATAAATCTCCGTTCCTTGGGGACTTGAAACCTGGCTGCAGTCAGTCCTCACTGGAGACAAATATGTATAGAGCACCTATATTTCCTCATAAAGTTCCATTAACTGACTACCTGCTGGTACGCTCACCAAAGGGAAAGCTATCACTAAGGCGCATTGATAAAATTAATGTTGTTGGACAGCAGGAGCCTCTGATGGAGGTGTTATCACCTGGAAGTAAGAATCTTCAGACTTACATGATGAACAGGCTATTAGTACACATGTGCCGTGAATTCCAAGCGGCAGAGAAGCGGCTCTTGCTCCCATGTGTCCGTATTGATGAGCTTCTGTCACAATTTCCTTACCTATCAGAAGCCTCTTTCCGTAAAAGGATTAAGGAATATGCCACTTTACAGAGGGGAACAAATGGACAGTCAATTTTGGTTAAAAAGCGAAATTTTCGCATGTGGTCTGAGGAAGAATTAAGAAAAATGGTGACCCCAGAACTTGTTTGTGCTTATGAAAGCATGCAAGCTGGCCTCTACCGTCTGAAACATTTAGGCATAACCGAAACACACCCTACTAATATTTCGTCTGCAATGAGTCGGCTTCCTGATGAAGCGATTGCACTGGCTGCTGCATCACATATTGAAAGGGAACTGCAGATTACTCCTTGGAACTTGAGTAGCAACTTTGTTGCCTGTACAAGCCAGGGTAAGGAAAATATTGAACGAATGGAAATCACTGGTGTCGGGGATCCATCTGGCCGTGGCTTGGGATTTAGCTATGCTCGGGCACCTCCAAAGGCACCAGTGTCTAGTGCAGTGGTGAAGAAGAAAGCTGCTGCTGGCCGGGGTGGTTCCACTGTTACTGGTACAGATGCTGATCTCCGTAGATTAAGCATGGAGGCTGCACGGGAGGTGCTGCTTAAATTCAATGTTGCTGAGGAAGTCATTGCAAAACAAACAAGATGGCATCGCATTGCTATGATACGCAAACTTTCAAGTGAGCAGGCTGCATCTGGGGTTAAGGTCGATCCAACTACTATCAGCAAATATGCTCGTGGCCAGCGAATGTCTTTTCTTCAGTTACAGCAACAGACCAGAGAGAAGTGCCAAGAGATCTGGGATCGACAACTTCAGAGTCTTTCAGCTGTAAATGGTGATGAAAATGAGAGTGATTCAGAAGAGAACAGTGATCTAGATTCTTTTGCTGGTGATCTTGAAAATTTACTTGATGCTGAGGAGTTTGAAGAGGGAGAAGAGGGTACCAATGACTTGAAACGTGATAAGGGAGATGGTGTTAAGGGTCTCAAAATGAGAAGACACCCAACCTCAGCCCAAGCTAGGGAGGAAAAAGAAGATGAAGAGGCTGAGGCTGCCGAATTATGCAGGTTGCTTATGGATGATGATGAAGCTGACAGGAAGAAAAAGAAGAAAGCTAGAGTTGTGGAAGAAGCTAGACTGGTACCAAAGCCGCCACCAAAATTCATCATCTATGACAGTACTGAACAAAATAAGCAAGTAACAAATACTTCACAACTAGATGGAACCATTCATTTGAAAGATGATGCAATTACAGATCTCAGGGAGGCAAGGCAACTTCCCTCTAGTCTTGAGGAAACTTTTCCTGCTAAAAAAGCGAAATCAGTGAAGGTCACAAAAGCAAAGAAGAATGAAATTGCACCTATTAGTCTACCTAATAAAAAACTCAAACTAAATATAGGAGAAGGAGCAATCAAGGTAATTGTATTTAAGGAGAAAAAACCATCCAGGGAAACTTTTGTTTGTGGAGCATGTGGCCAGCTTGGGCACATGAGGACCAACAAGAACTGTCCAAAATATGGTGAAGATCTAGAAGCACAGATTGAATCTACAGACATTGAAAAACCATCTGGAAAGTCTATCATTTTGGATCCCTCTAATCAGTCCCAGCAGAAAAGCCTCACGAAAAAGTTGGTGCCTAAAACTGCACCCAAAACCCCTTCAGTTGACAATTCCACAAAATTGAAGTTCATATGCATCTCCACTGAGAAGTCTTCTGATAAACCTGCTTTAGAAAACCTGCAGAGTTCTGAGAAGCCAGTCACATCTGATTCTGAAACTGCTAGGTCTGCTAAGGTTAATAGAATAATTTTTCCTAAAAAAGTGAAGCCAGATGATACACAGGCTGAATCTGTAAGACGTCCTATCGTTATTCGGCCTCCTACTGATTCTGCTAGAGGTCAGGTTGATTCTCCCAAGGTCCCAATTAAATTTCGGCCACCTACAGATATAGAGAGGGAGAGACATCATCAAAAGCTTGTTATTAAACCTGCAAAGGAGATTGTTGATGTGGACCTTGACAGTCCTTATGGAAACAAACGACTAGAACACAGAAAAACCAAGAGAATTGTTGAACTGGCCAATTTTGAGAAACAAAGAAAGCCAGAGCCCATGTATCGGCAAGCTAAAGAGGAGAGGAGATGGTGGGAAGAGCAAGAGAAACGAAGAAACGAAGCGAGACTCAAAGAAGAAAGGGCTAGAAGACACCACAAAGAAGAAGTTAGGATGCTCAGAGAGCAAGAGAAGTTAGACGAGATAAAAAGATTCGAAGAAGATATTAGAAGAGAGAGGGAGGAGGAGGAACGGCAAAAGGCGAAGAAGAAAAAGAAGAAGAAAAAGCCCGAATTTACAGACGACTATTTAGATGACCCCAGAGCTAGAAGATATGATAAGAGGATGCTAGACAGAGACAAGAGCACGAAGAGGAGATCCATCGAGTTAGGAAAACGTGGCGCAGACTTGATGCCGCCAACAAAACGGCGAAGAGGGGGAGGGGGAGAGGTTGGTTTAGCAAACATATTGGAGAGCATTGTGGATGCCATGAAAGATAAGTATGAGCTGTCATATCTTTTTATGAAACCGGTTTCCAAGAAAGAGGCTCCTGATTACCTGGACATTATAGAGAGGCCTATGGATCTTGCTCGAATCCGGGAGAGGGTTCGGAATATGGAGTACAAGAGCAGAGAGGATTTCAGACACGATGTTTGGCAAATAACTTATAATGCTCATAAGTATAACGATGGGCGAAATCCTGGGATTCCACCCCTTGCAGATATGCTTCTGGAATATTGTGATTATTTATTGAATGAGAATGATGAACACCTCACTGAAGCGGAAGCTGGTATTGAGAATAGAGATTTCTAA 5334 0.4246 MDYDSDNPSQDGRDEDDEEEYEESGKDSGFLALMFGNFDNSGGLDADYFDEDAKEHIHALAGKLDSSLTDIDLSGKSPQTPPDVVEQDSIEKAEDAVDYEDIDEEYDGPETEAANEEDYLLPKKEFFAAEASLEALGSRTSVFDDENYDEESDKEQDGVDDSKAVSLAGEQEKSVVDASKEDKDSALERDVQVGLQQTEELAFKVKTLEEGPEVLKRSTPLPVLYVEDGMEILRFSEIFGIHEPLRKGERREHRHSVTHDRYKSLDLSDDIVEEDEEAFLKGFSSLSLTKQACVVHNDASESNDVDLEFPKFGFLHGDASTPAKDDRQQKDSCLSAEPMKGDFTNELPWKDTYVLSANFYPLDQQDWEDEIIWGNSPVVSDTNFESCEISGPELGASGGSEIEIESGIQNIQLEPQKIMEEKKMFYQDDQMHFEVLDNKNSSHLHLHAGAMILTRSLKSSSGDSELPVQGGQYGWRYVANDKHYSNRKTSQQLKSNSKKRSAHGVKIFHSQPALKLQTMKLKLSNKDIANFHRPKALWYPHDSEVVVREQRKLSTQGPMKIIMKSLGGKGTKLHVDAEETLASVKAKAAKKLDFKGSENVKTFYLGRELEDQKSLAAQNVQSNSLLHLVRTKIHLWSRAQRVPGENKSLRPPGAFKKKSDLSVKDGHVFLMEYCEERPLLLGNAGMGARLCTYYQKCSPDDQSGSLLRNTDNSLGHIISLDPADKSPFLGDLKPGCSQSSLETNMYRAPIFPHKVPLTDYLLVRSPKGKLSLRRIDKINVVGQQEPLMEVLSPGSKNLQTYMMNRLLVHMCREFQAAEKRLLLPCVRIDELLSQFPYLSEASFRKRIKEYATLQRGTNGQSILVKKRNFRMWSEEELRKMVTPELVCAYESMQAGLYRLKHLGITETHPTNISSAMSRLPDEAIALAAASHIERELQITPWNLSSNFVACTSQGKENIERMEITGVGDPSGRGLGFSYARAPPKAPVSSAVVKKKAAAGRGGSTVTGTDADLRRLSMEAAREVLLKFNVAEEVIAKQTRWHRIAMIRKLSSEQAASGVKVDPTTISKYARGQRMSFLQLQQQTREKCQEIWDRQLQSLSAVNGDENESDSEENSDLDSFAGDLENLLDAEEFEEGEEGTNDLKRDKGDGVKGLKMRRHPTSAQAREEKEDEEAEAAELCRLLMDDDEADRKKKKKARVVEEARLVPKPPPKFIIYDSTEQNKQVTNTSQLDGTIHLKDDAITDLREARQLPSSLEETFPAKKAKSVKVTKAKKNEIAPISLPNKKLKLNIGEGAIKVIVFKEKKPSRETFVCGACGQLGHMRTNKNCPKYGEDLEAQIESTDIEKPSGKSIILDPSNQSQQKSLTKKLVPKTAPKTPSVDNSTKLKFICISTEKSSDKPALENLQSSEKPVTSDSETARSAKVNRIIFPKKVKPDDTQAESVRRPIVIRPPTDSARGQVDSPKVPIKFRPPTDIERERHHQKLVIKPAKEIVDVDLDSPYGNKRLEHRKTKRIVELANFEKQRKPEPMYRQAKEERRWWEEQEKRRNEARLKEERARRHHKEEVRMLREQEKLDEIKRFEEDIRREREEEERQKAKKKKKKKKPEFTDDYLDDPRARRYDKRMLDRDKSTKRRSIELGKRGADLMPPTKRRRGGGGEVGLANILESIVDAMKDKYELSYLFMKPVSKKEAPDYLDIIERPMDLARIRERVRNMEYKSREDFRHDVWQITYNAHKYNDGRNPGIPPLADMLLEYCDYLLNENDEHLTEAEAGIENRDF 1777
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu05g00219 1777 MobiDBLite consensus disorder prediction 1351 1367 - -
Adu05g00219 1777 SMART bromo_6 1653 1763 IPR001487 GO:0005515
Adu05g00219 1777 MobiDBLite consensus disorder prediction 1585 1656 - -
Adu05g00219 1777 Pfam Protein of unknown function (DUF3591) 479 1045 IPR022591 -
Adu05g00219 1777 Gene3D - 1648 1776 IPR036427 GO:0005515
Adu05g00219 1777 Pfam Ubiquitin family 563 631 IPR000626 GO:0005515
Adu05g00219 1777 MobiDBLite consensus disorder prediction 1 28 - -
Adu05g00219 1777 MobiDBLite consensus disorder prediction 1602 1647 - -
Adu05g00219 1777 MobiDBLite consensus disorder prediction 1347 1379 - -
Adu05g00219 1777 MobiDBLite consensus disorder prediction 1450 1469 - -
Adu05g00219 1777 Pfam Bromodomain 1665 1739 IPR001487 GO:0005515
Adu05g00219 1777 ProSiteProfiles Bromodomain profile. 1673 1743 IPR001487 GO:0005515
Adu05g00219 1777 SUPERFAMILY Ubiquitin-like 530 629 IPR029071 -
Adu05g00219 1777 SMART ubq_7 559 631 IPR000626 GO:0005515
Adu05g00219 1777 PANTHER BNAA01G26290D PROTEIN 1293 1774 - -
Adu05g00219 1777 MobiDBLite consensus disorder prediction 1398 1418 - -
Adu05g00219 1777 MobiDBLite consensus disorder prediction 1137 1172 - -
Adu05g00219 1777 PANTHER BNAA01G26290D PROTEIN 15 402 - -
Adu05g00219 1777 PANTHER BNAA01G26290D PROTEIN 416 1230 - -
Adu05g00219 1777 SUPERFAMILY Bromodomain 1643 1767 IPR036427 GO:0005515
Adu05g00219 1777 MobiDBLite consensus disorder prediction 1131 1172 - -
Adu05g00219 1777 Coils Coil 1569 1603 - -
Adu05g00219 1777 ProSitePatterns Bromodomain signature. 1678 1735 IPR018359 -
Adu05g00219 1777 PRINTS Bromodomain signature 1676 1689 IPR001487 GO:0005515
Adu05g00219 1777 PRINTS Bromodomain signature 1724 1743 IPR001487 GO:0005515
Adu05g00219 1777 PRINTS Bromodomain signature 1690 1706 IPR001487 GO:0005515
Adu05g00219 1777 PRINTS Bromodomain signature 1706 1724 IPR001487 GO:0005515
Adu05g00219 1777 Gene3D - 541 631 - -
Adu05g00219 1777 Coils Coil 1161 1181 - -
Adu05g00219 1777 MobiDBLite consensus disorder prediction 1 24 - -
Adu05g00219 1777 ProSiteProfiles Ubiquitin domain profile. 559 629 IPR000626 GO:0005515
Adu05g00219 1777 MobiDBLite consensus disorder prediction 69 119 - -
Adu05g00219 1777 MobiDBLite consensus disorder prediction 142 185 - -
Adu05g00219 1777 PANTHER TRANSCRIPTION INITIATION FACTOR TFIID 1293 1774 IPR040240 GO:0001091|GO:0004402|GO:0005669|GO:0006366|GO:0017025
Adu05g00219 1777 PANTHER TRANSCRIPTION INITIATION FACTOR TFIID 15 402 IPR040240 GO:0001091|GO:0004402|GO:0005669|GO:0006366|GO:0017025
Adu05g00219 1777 PANTHER TRANSCRIPTION INITIATION FACTOR TFIID 416 1230 IPR040240 GO:0001091|GO:0004402|GO:0005669|GO:0006366|GO:0017025
Adu05g00219 1777 MobiDBLite consensus disorder prediction 70 84 - -
Adu05g00219 1777 MobiDBLite consensus disorder prediction 93 114 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu05g00219 559 629 Cytoplasmic Ribosomal Protein Gene Family AT3G62250 38.028 4.44e-07 49.7