Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu05g00198 ATGGCTGAATCTCTACTTCAAATGGTGATTGAAAACTTGCAAGCTTTCGTTCAGGACGAGCTTGCAACTCTTTGGGGCGTCCACTCGCAGATTCAAGAGCTGTCAGGGAACCTTGCTGCAATCCATGCAGTGCTCCAAGATGCTGAAGAGAAGCAGATCAGAGAGCGTGCTGTGAAGCTTTGGCTGCAGAAGCTTTCAGATGCAGCACACGTGCTTGATGATATCTTAGATGAATGTTCAATAGAGTCCAACCGTCTACACAGTGACCAGTGCTTAACTCGTCTTGATCCTGTGACCATCATGTTTCGTCGGGACATTGGTAAGAGGATGAAAGAGATGGTTGACAGGTTTCGTCAAATTGATGAAGAAAGGAGAAGGTTTGAATTGCGTGGAAGAGTTCCAGAGAGGCAACAAGAAGATGAAGCATGGCGCCAGACATGTTCTGGTATCACTGAGCACAATATCTATGGAAGGGAGCAAGACACAAAAAATATTGTGGAGTTTCTTTCAAGGAGTGCTGATAGCAGTAACGACCTCTCTGTTTATCCAATTGTTGGCATGGGGGGCCTTGGAAAAACAACACTTGTCCGATGGGTTTACAATGACAACAAGGTAATTGAACATTTCGATCTGAGAATTTGGGTTTGTGTTTCCACTGAATTCAATACCATGAGAATTCTAGAGTCCATTGTGGAATCTACAAGTGGACATAACCCGAACCTCTCTACTTTAGAAGCACTGAAAAACAAAGTTCAAGAAATACTGCTAGGCAAAAGGTATTTACTTGTTCTAGACGATATGTGGAGCACGGACAAATGGGAGGACTTGAAGTCTGTTTTGCTTTGCGGAGGTGGAACAAAAGGTGCTGCAGTTTTGGTTACTACCCGAGTTGAGAGTGTTGCATCTGTCATGGGAACATGCCATGCTCATCACTTGTCACCATTATCCGAGGATGACAATTGGTTATTGTTCAAATACCATGCATTTGGATCAGACAAAGTGGAGCGCACAGAGCTTGTGGCAATAGGCAAGAAGATTGTAAAGAAATGTGGTGGTTCCCCTCTTGCATCTAAAGCACTTGGAAGCCTTTTGCACAATAAAAAGGAGGAAATACAGTGGGTGAATGTATTGGAAAGTAAGTTTTGGGACATACTTGAGGATGATTCTATTATTGTACGTGCTTTGAAAATCAGCTACTTCCATTTGAAGTTGTCATTAAGACAATGCTTTGCTTTTTGTGCCATTTTCCCCGAAGATTTTCGAATGGAAAAGGAACAACTTATTCATCTTTGGATGGCCAATGGTTTGATCAAATCCAAAGGGAGGTTGGAGATTGAGGATGTTGGTAATGAGGTTTGGGAGGAATTATGTCAGAGATCATTTTTCCAAGAAGTTGAGATTGATGAATTGGGAAGAACTACATTCAAGATGCATGATTTATTTCATGAACTTGCCCAATCCATAATGGGAGAAGAGTGCAGAGTTTATGATGAGTCTGCAAGCTTGACCAATTTGTCTACAAGGGTCCACCATGTCACTTGTTTAAAACCAGAGAGGAAGGTAAACATGGATCCCTTCAAGAAAGCTGAATCCTTGAGGAGTATGATTAATCTTCATCCATTTGATTATCATCGCAACCTTAATGGGTTGCGACCATTCAATTCTCTCCGTGCACTACGTACAAATGCTTCTCAACTCTCAGCACTGAAGAGTTTAACGCATTTGAGGTACCTAAATCTGCGTAGGAGCGGTATCACAACACTGCCTGAATGTGTTTCGAGGTTACAAAAATTGCAGATTCTGAAGTTAGAAAGGTGTGAAAATCTTTCTTGTTTGCCCAAACACTTAACACAATTGAAGGATCTTAGACATCTCCTAATTAAAGCATGTCATTCATTAGTAGAGATGCCTCCGAATATCGGCGAGTTGAAATGTTTGAAAACATTGAATCTTTTTATTGTTGATACAAAGGAAGGGCATGGGTTATCAGAGTTGCGTGATTTACAGCTTGGAGGCAAACTACGCATCAAGGGGCTTGAAAATGTCATACATGAGGGTGATGCTAGAGATGCTAATTTGAGTGCTAAGAAGAAGTTGGAAAAGTTATACCTGTCATGGGACTCCTCTGATTCAAGGGGTGGTGCCAATGCTGAGAGAATACTTGAAGCCCTTGAGCCTCCCTCCAATCTCAAGAGTTTTGGGATGAATGGTTACAGCGGAGTAGAGTTGCCTAGCTGGATGCAAAATACTTCAATTCTTTCCAGCTTAGTTATGGTGATACTCTATGATTTCAAGAACTGCAAGCACCTTCCTCCGCTGGGTAAATTACCACATTTAACTGTTCTTTATGTATCTGGAATGAAAGATGTGAAGTACATCGATGAGGACTCATATGATGGCGTGGATGAGAAGGCATTCAAATCGTTGAAGTACCTGACCTTATCGAAGCTGCCAAACTTGGAAGGGATGTTACTAGATGAACGAGTAGAAATGCTTCCGCTTCTTTCTAAATTAAAGGTCTCGTGTGTCCCTAAGATTAAGTTGCCACTCCTTCCATCTCTAGAGTACATTTGTATTGAAGGAACAGGGTCAGACTCTGATCATGGTGATAGTGATAGTGAAGACATGGCTTTGTCTTTCCTGGAAGCTATTGTGGAGAATATGCGTCGTGTTAAGGTCCTCCATATTGAACACTTTCCTACACTCAAGGCATTACCCCATGAACTAGGCAGCCTCAATTCACTACAAGAGTTAGAACTCTACTCTTGCGATAGACTTGAGTCTTTTTCAGAGAACGTGGTGCAAGGTTTGGGTTCACTTCGAACTTTGACTATTAATCGTTGTAAGGAACTGAAATCTTTGTCTGAAGGTGTGAGACATCTAACTTGTCTGGAGCGCCTTCATATCATATACTGTCCAAAGCTGGTGACTCTACCGAGTAGCATGAATCAGCTAGTTTCCCTTCGTCATAGTTGCATCTATTGTGATACATTGCCAGAAGGCTTACAACATGTCCCTTCCCTCCAAAGTTTGGATGTGTTTGACATACGTTCAATTCCTGAGTGGTTGGGGGACTTAACTTCTCTTCAAAAGTTACGTCTCTCCAGTAAGGGGTTAAGGTCACTGCCCAGTAGCATCCGAAACCTGCCCAACTTGCGTGAGCTATCTATTGATGGGTGCCATAAGGAGCTGCAGAAGCGATGCACCAAAGTAACAGGACAGGATTGGCAGGCCATTGCTCACATCCCACAATTCAAACTG 3261 0.4238 MAESLLQMVIENLQAFVQDELATLWGVHSQIQELSGNLAAIHAVLQDAEEKQIRERAVKLWLQKLSDAAHVLDDILDECSIESNRLHSDQCLTRLDPVTIMFRRDIGKRMKEMVDRFRQIDEERRRFELRGRVPERQQEDEAWRQTCSGITEHNIYGREQDTKNIVEFLSRSADSSNDLSVYPIVGMGGLGKTTLVRWVYNDNKVIEHFDLRIWVCVSTEFNTMRILESIVESTSGHNPNLSTLEALKNKVQEILLGKRYLLVLDDMWSTDKWEDLKSVLLCGGGTKGAAVLVTTRVESVASVMGTCHAHHLSPLSEDDNWLLFKYHAFGSDKVERTELVAIGKKIVKKCGGSPLASKALGSLLHNKKEEIQWVNVLESKFWDILEDDSIIVRALKISYFHLKLSLRQCFAFCAIFPEDFRMEKEQLIHLWMANGLIKSKGRLEIEDVGNEVWEELCQRSFFQEVEIDELGRTTFKMHDLFHELAQSIMGEECRVYDESASLTNLSTRVHHVTCLKPERKVNMDPFKKAESLRSMINLHPFDYHRNLNGLRPFNSLRALRTNASQLSALKSLTHLRYLNLRRSGITTLPECVSRLQKLQILKLERCENLSCLPKHLTQLKDLRHLLIKACHSLVEMPPNIGELKCLKTLNLFIVDTKEGHGLSELRDLQLGGKLRIKGLENVIHEGDARDANLSAKKKLEKLYLSWDSSDSRGGANAERILEALEPPSNLKSFGMNGYSGVELPSWMQNTSILSSLVMVILYDFKNCKHLPPLGKLPHLTVLYVSGMKDVKYIDEDSYDGVDEKAFKSLKYLTLSKLPNLEGMLLDERVEMLPLLSKLKVSCVPKIKLPLLPSLEYICIEGTGSDSDHGDSDSEDMALSFLEAIVENMRRVKVLHIEHFPTLKALPHELGSLNSLQELELYSCDRLESFSENVVQGLGSLRTLTINRCKELKSLSEGVRHLTCLERLHIIYCPKLVTLPSSMNQLVSLRHSCIYCDTLPEGLQHVPSLQSLDVFDIRSIPEWLGDLTSLQKLRLSSKGLRSLPSSIRNLPNLRELSIDGCHKELQKRCTKVTGQDWQAIAHIPQFKL 1087
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu05g00198 1087 Gene3D - 6 125 - -
Adu05g00198 1087 SUPERFAMILY RNI-like 807 1061 - -
Adu05g00198 1087 PANTHER OS10G0130600 PROTEIN 5 955 - -
Adu05g00198 1087 Pfam NB-ARC domain 159 378 IPR002182 GO:0043531
Adu05g00198 1087 Gene3D Ribonuclease Inhibitor 519 847 IPR032675 -
Adu05g00198 1087 PRINTS Disease resistance protein signature 350 364 - -
Adu05g00198 1087 PRINTS Disease resistance protein signature 254 268 - -
Adu05g00198 1087 PRINTS Disease resistance protein signature 181 196 - -
Adu05g00198 1087 PRINTS Disease resistance protein signature 593 609 - -
Adu05g00198 1087 SMART LRR_typ_2 572 595 IPR003591 -
Adu05g00198 1087 SMART LRR_typ_2 1026 1049 IPR003591 -
Adu05g00198 1087 Gene3D Ribonuclease Inhibitor 848 990 IPR032675 -
Adu05g00198 1087 Coils Coil 31 51 - -
Adu05g00198 1087 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 141 413 IPR027417 -
Adu05g00198 1087 Pfam Rx N-terminal domain 6 88 IPR041118 -
Adu05g00198 1087 SUPERFAMILY L domain-like 476 859 - -
Adu05g00198 1087 Gene3D Ribonuclease Inhibitor 991 1071 IPR032675 -
Adu05g00198 1087 Gene3D - 405 487 IPR036388 -
Adu05g00198 1087 PANTHER DISEASE RESISTANCE PROTEIN RP 5 955 IPR044974 GO:0006952
Adu05g00198 1087 Gene3D - 314 403 IPR042197 -
Adu05g00198 1087 Gene3D - 141 309 IPR027417 -
Adu05g00198 1087 CDD RX-CC_like 2 120 IPR038005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu05g00198 Adu-Chr5 2172440 2175700 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu05g00198 178 786 WRKY Transcription Factor Family AT5G45050 23.328 1.56e-09 60.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu05g00198 - - ahf:112747502 1876.29